Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04779 and BL02140

See Amino acid alignment / Visit BSNT_04779 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:00
# Commandline: needle
#    -asequence dna-align/BSNT_04779___yutF.1.5803.seq
#    -bsequence dna-align/BL02140___yutF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04779___yutF-BL02140___yutF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04779___yutF-BL02140___yutF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04779___yutF
# 2: BL02140___yutF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 793
# Identity:     591/793 (74.5%)
# Similarity:   591/793 (74.5%)
# Gaps:          44/793 ( 5.5%)
# Score: 2200.5
# 
#
#=======================================

BSNT_04779___      1 ATGAAAACATATAAAGGGTATTTAATTGATTTAGACGGAACGATGTACAA     50
                     |||||||||||.|||||.||.|||||||||.|.||.|||||.||||||||
BL02140___yut      1 ATGAAAACATACAAAGGATACTTAATTGATCTTGATGGAACAATGTACAA     50

BSNT_04779___     51 TGGCACGGAAAAAATCGAGGAGGCGTGTGAATTTGTCAGAACGCTGAAAG    100
                     .||.||||||||||||||.||.||.||.|||||.||.||.|.||||||||
BL02140___yut     51 AGGGACGGAAAAAATCGAAGAAGCATGCGAATTCGTGAGGAAGCTGAAAG    100

BSNT_04779___    101 ATCGCGGCGTTCCTTATCTTTTCGTGACAAACAACTCTTCGCGCACACCG    150
                     |.||...|.|.||.|||||.||.||.||.||||||||.||||||||.|||
BL02140___yut    101 ACCGGAACATCCCGTATCTGTTTGTCACGAACAACTCGTCGCGCACGCCG    150

BSNT_04779___    151 AAGCAGGTAGCGGACAAGCTCGTGTCTTTTGATATTCCGGCAACAGAAGA    200
                     |||||.||.|||||||||||.||.||.|||||||||||||   |.|||||
BL02140___yut    151 AAGCAAGTGGCGGACAAGCTTGTTTCATTTGATATTCCGG---CCGAAGA    197

BSNT_04779___    201 G---CAGGTCTTCACGACCAGCATGGCAACTGCCCAGCACATTGCACAGC    247
                     |   |||||.|||||.||||||||||||||.|||     .|||.||..||
BL02140___yut    198 GAGCCAGGTATTCACAACCAGCATGGCAACCGCC-----AATTTCATCGC    242

BSNT_04779___    248 AGAAAAAA-----GACGCGTCTGTGTATGTGATTGGGGAGGAAGGAATCC    292
                     .|||.|||     ||.||.||.||.||||||||.||.||.|||||.||||
BL02140___yut    243 CGAACAAAAACCCGATGCTTCCGTATATGTGATCGGCGAAGAAGGGATCC    292

BSNT_04779___    293 GCCAGGCGATTGAAGAAAACGGCCTGACATTTGGCGGAGAAAACGCGGAC    342
                     |.|||||.|||||.|||||.||.|||.||||.|||||.|||.||||.|||
BL02140___yut    293 GTCAGGCCATTGAGGAAAAAGGGCTGGCATTCGGCGGGGAAGACGCCGAC    342

BSNT_04779___    343 TTTGTCGTTGTTGGCATCGACCGTTCCATTACATACGAAAAATTTGCTGT    392
                     ||||||||.||.|||||||||||...|||||||||||||||..|.||.||
BL02140___yut    343 TTTGTCGTCGTCGGCATCGACCGCGGCATTACATACGAAAAGCTAGCCGT    392

BSNT_04779___    393 CGGCTGCCTGGCAATCAGAAATGGCGCCCGCTTTATTTCCACTAACGGAG    442
                     |||.||.||.||.|||.|.||.|||||....||.||.||.||||||||.|
BL02140___yut    393 CGGTTGTCTTGCCATCCGCAACGGCGCTACATTCATCTCGACTAACGGCG    442

BSNT_04779___    443 ATATTGCGATTCCGACTGAAAGAGGGCTTCTGCCGGGAAACGGCTCACTG    492
                     ||||.||.|||||.||.||||||||.||..||||.||.||.||.||.||.
BL02140___yut    443 ATATCGCCATTCCTACAGAAAGAGGACTCTTGCCAGGCAATGGTTCTCTC    492

BSNT_04779___    493 ACATCGGTGTTAACCGTATCTA--CAGGTGTAC--AGCCTGTATTTATCG    538
                     ||.||.||.|||||.||.||||  |||    ||  |||||.|.|||||||
BL02140___yut    493 ACGTCAGTATTAACTGTTTCTACGCAG----ACAGAGCCTATTTTTATCG    538

BSNT_04779___    539 GCAAGCCGGAATCAATTATTATGGAGCAGGCGATGCGCGTTCTCGGCACA    588
                     ||||||||||..|.||.||.|||||||||||||||...||.|||||||||
BL02140___yut    539 GCAAGCCGGAGCCGATCATCATGGAGCAGGCGATGAAGGTGCTCGGCACA    588

BSNT_04779___    589 GATGTGTCTGAAACACTCATGGTCGGCGACAACTACGCCACTGATATTAT    638
                     ||..|...||||||.||.||||||||.|||||.||.|..||.||||||||
BL02140___yut    589 GACATCAGTGAAACGCTGATGGTCGGTGACAATTATGATACGGATATTAT    638

BSNT_04779___    639 GGCCGGCATTAACGCGGGTATGGATACGCTGCTCGTTCACACAGGCGTAA    688
                     |||.||.||.||..|.||.|||||.|||||.||||||||.||.|||||.|
BL02140___yut    639 GGCGGGAATGAATTCCGGGATGGACACGCTTCTCGTTCATACGGGCGTGA    688

BSNT_04779___    689 CGAAAAGAGAACA--TATGACAGACGATATGGAAAAACCGACTCACGCCA    736
                     |.||||.||||||  | ||| ||.|.||..||||||.|||||..|.|.||
BL02140___yut    689 CCAAAAAAGAACACCT-TGA-AGCCTATCAGGAAAAGCCGACATATGTCA    736

BSNT_04779___    737 TTGACTCTCTGACTGAATGGAT--------TCCATACATTTGA    771
                     ||||.||.|||||.||||||.|        ||.|.        
BL02140___yut    737 TTGATTCACTGACAGAATGGCTGGATCGCGTCTAA--------    771


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04779 and BL02140

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
