Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04774 and BL02137
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:59
# Commandline: needle
# -asequence dna-align/BSNT_04774___hom.1.5803.seq
# -bsequence dna-align/BL02137___hom.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04774___hom-BL02137___hom.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04774___hom-BL02137___hom.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04774___hom
# 2: BL02137___hom
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1313
# Identity: 1020/1313 (77.7%)
# Similarity: 1020/1313 (77.7%)
# Gaps: 22/1313 ( 1.7%)
# Score: 3881.5
#
#
#=======================================
BSNT_04774___ 1 TTGAAAGCGATTCGTGTAGGGCTTTTAGGTTTAGGTACCGTCGGAAGCGG 50
|||||.|||||.||.||.|||||..||||.|||||.||.|||||.|||||
BL02137___hom 1 TTGAAGGCGATACGAGTGGGGCTGCTAGGATTAGGAACAGTCGGGAGCGG 50
BSNT_04774___ 51 TGTCGTTAAAATTATTCAAGACCATCAGGATAAGCTTATGCATCAGGTCG 100
|||.||.||.||||||||.||.||.|||||||||||.|..||.||.||||
BL02137___hom 51 TGTGGTGAAGATTATTCAGGATCACCAGGATAAGCTGACACACCAAGTCG 100
BSNT_04774___ 101 GCTGTCCGGTTACGATAAAAAAAGTGCTTGTAAAAGATTTAGAGAAAAAG 150
|.||.||.||||||||..|||||||.||||||||||||..|||.||.|||
BL02137___hom 101 GATGCCCTGTTACGATTCAAAAAGTTCTTGTAAAAGATAAAGATAAGAAG 150
BSNT_04774___ 151 AGAGAAGT--AGATTTGCCGAAGGAAGTGCTCACGACAGAAGTGTATGAT 198
||.||.|| ||.||| |.||.||.||.||.|||||.||||..||||||
BL02137___hom 151 AGGGATGTCGAGCTTT--CCAAAGACGTTCTGACGACTGAAGCCTATGAT 198
BSNT_04774___ 199 GTCATTGATGATCCAGATGTTGATGTCGTCATCGAGGTGATCGGCGGCGT 248
||||||.|.||||||||.||.||||||.|.||||||||.|||||.||..|
BL02137___hom 199 GTCATTCAAGATCCAGAAGTAGATGTCATTATCGAGGTCATCGGGGGGAT 248
BSNT_04774___ 249 TGAACAGACAAAACAATATTTGGTCGACGCGC-TGAGATCGAAAAAGCAT 297
.||..||||.|.||..||||||.|.||||||| |.|| .||||.||.||.
BL02137___hom 249 CGAGGAGACGAGACGCTATTTGCTTGACGCGCTTCAG-GCGAAGAAACAC 297
BSNT_04774___ 298 GTTGTCACAGCAAACAAGGACTTAATGGCTGTGTACGGCTCCGAGCT--- 344
||.||.|||||.||.||.||.||.||.||..|.||.||.||.||.||
BL02137___hom 298 GTCGTGACAGCGAATAAAGATTTGATCGCCCTCTATGGATCGGAACTGAC 347
BSNT_04774___ 345 -GCTTGCCGAAGCGAAGGAAAATGGATGCGATATCTACTTTGAAGCCAGT 393
|| |||| |||||.|||||.||.|||||..|.||.||||||||.||.
BL02137___hom 348 GGC-TGCC---GCGAAAGAAAACGGCTGCGACCTTTATTTTGAAGCGAGC 393
BSNT_04774___ 394 GTTGCCGGCGGGATTCCGATTCTGCGCA-CGTTAGAGGAAGGCCTCTCAT 442
||.||||||||.|||||||||.||||.| |.|| ||.||.||.||..|.|
BL02137___hom 394 GTCGCCGGCGGAATTCCGATTTTGCGAAGCCTT-GAAGACGGGCTGGCTT 442
BSNT_04774___ 443 CAGATCGAATTACAAAAATGATGGGAATTGTGAACGGCACAACAAACTTT 492
||||.||.|||||.||.||||||||.||.||.||.||.||.||.||||||
BL02137___hom 443 CAGACCGGATTACGAAGATGATGGGCATCGTCAATGGAACGACCAACTTT 492
BSNT_04774___ 493 ATCTTAACCAAAATGATCAAAGAGAAAAGC-CCATACGAGGAAGTGCTCA 541
||.|||||.||.||||.|||||| |||.|| ||.||.||.||.|||||.|
BL02137___hom 493 ATTTTAACGAAGATGAACAAAGA-AAACGCGCCTTATGACGAGGTGCTGA 541
BSNT_04774___ 542 AGGAAGCGCAGGATCTCGGTTTTGCCGAAGCTGATCCGACTTCTGACGTG 591
|.|||||||||||.|||||.||.||.|||||.||.|||||..||||.||.
BL02137___hom 542 AAGAAGCGCAGGAGCTCGGCTTCGCAGAAGCAGACCCGACAGCTGATGTT 591
BSNT_04774___ 592 GAAGGGCTTGACGCCGCACGGAAAATGGCGATATTGGCGCGCCTCGGCTT 641
|||||.|||||.|||||..|.||.||||||||.|||||..|.|||||.||
BL02137___hom 592 GAAGGTCTTGATGCCGCGAGAAAGATGGCGATTTTGGCCAGGCTCGGTTT 641
BSNT_04774___ 642 CTCGATGAACGTGGATCTGGAAGACGTCAAAGTAAAGGGGATCTCCCAAA 691
|||.|||||.||.||.||.||.||.||||||||.||.||.||.||||||.
BL02137___hom 642 CTCAATGAATGTCGACCTTGACGATGTCAAAGTGAAAGGCATTTCCCAAG 691
BSNT_04774___ 692 TTACAGACGAGGACATCAGCTTCAGCAAACGCCTCGGCTATACAATGAAG 741
|..|.||.||.|||||||..|||||||||||.|||||||||||.||||||
BL02137___hom 692 TGTCTGATGAAGACATCAATTTCAGCAAACGGCTCGGCTATACGATGAAG 741
BSNT_04774___ 742 CTGATCGGGATTGCTCAGCGTGACGGCAGCAAAA--TCGAGGTCAGCGTA 789
||||||||.||.||||||||.||||| .||||| ||||.||.|||||.
BL02137___hom 742 CTGATCGGCATCGCTCAGCGCGACGG--ACAAAAAGTCGAAGTGAGCGTC 789
BSNT_04774___ 790 CAGCCGACACTGCTTCCTGACCATCATCCGCTTTCTGCTGTTCATAATGA 839
|||||||||.||||.||.||.|||||||||||.|||.|.||.||||||||
BL02137___hom 790 CAGCCGACATTGCTGCCGGAGCATCATCCGCTGTCTTCCGTCCATAATGA 839
BSNT_04774___ 840 GTTTAACGCTGTTTATGTATACGGCGAGGCTGTCGGTGAGACGATGTTCT 889
.||.||.||.|||||.|||||||||||.||.||.||.||.||||||||.|
BL02137___hom 840 ATTCAATGCGGTTTACGTATACGGCGAAGCCGTAGGGGAAACGATGTTTT 889
BSNT_04774___ 890 ACGGGCCGGGAGCCGGAAGCATGCCGACAGCGACATCCGTTGTTTCTGAC 939
||||.||.||.|||||||||||||||||.||.||..||||.||.||.||.
BL02137___hom 890 ACGGACCTGGCGCCGGAAGCATGCCGACTGCAACCGCCGTCGTGTCAGAT 939
BSNT_04774___ 940 CTCGTCGCTGTCATGAAAAATATGCGCCTCGGTGTAACCGGCAACAGCTT 989
.|.|||.|.|||||||||||.|||||.||.||.||.|.|||||.||||||
BL02137___hom 940 TTGGTCTCCGTCATGAAAAACATGCGTCTTGGCGTGAACGGCAGCAGCTT 989
BSNT_04774___ 990 TGTCGGGCCGCAATATGAGAAAAATATGAAATCGCCGTCTGACATTTATG 1039
|||||..|||||.|.|||.||.||.||.||..||||||||||.||.|.||
BL02137___hom 990 TGTCGATCCGCAGTTTGAAAAGAAGATAAAGGCGCCGTCTGAAATCTTTG 1039
BSNT_04774___ 1040 CACAGCAGTTTTTAAGAATTCATGTAAAAGATGAGGTTGGTTCATTCTCG 1089
|.|||||||||||||||||||||||.|||||..||||||||||.||.|||
BL02137___hom 1040 CCCAGCAGTTTTTAAGAATTCATGTCAAAGACCAGGTTGGTTCGTTTTCG 1089
BSNT_04774___ 1090 AAAATTACATCTGTGTTCTCAGAGCGGGGCGTGAGCTTTGAAAAAATCCT 1139
|||||.|||||..|.||.|||||..|.|||||.|||||||||||.|||||
BL02137___hom 1090 AAAATCACATCGATTTTTTCAGAAAGAGGCGTCAGCTTTGAAAAGATCCT 1139
BSNT_04774___ 1140 TCAGCTGCCAATTAAAGGCCATGATGAGTTAGCTGAAATCGTAATTGTCA 1189
||||||.||.||||||||||||||.||..|.|||||.||.||.|||||.|
BL02137___hom 1140 TCAGCTTCCGATTAAAGGCCATGACGACCTGGCTGAGATTGTCATTGTGA 1189
BSNT_04774___ 1190 CACATCATACATCAGAAGCTGATTTCAGTGATATCCTGCAAAACCTAAAT 1239
||||||||||.|||||||..|||||.|..||||||||||||||.||.||.
BL02137___hom 1190 CACATCATACGTCAGAAGAGGATTTTACGGATATCCTGCAAAAGCTGAAC 1239
BSNT_04774___ 1240 GATTTGGAAGTCGTTCAAGAAGTCAAAAGCACATATCGTGTAGAAGGGAA 1289
|||.|.||.||.|||||..|.||.||||||||.|||||.|||||||||||
BL02137___hom 1240 GATCTTGAGGTTGTTCATCAGGTGAAAAGCACTTATCGAGTAGAAGGGAA 1289
BSNT_04774___ 1290 CGGTTGGAGCTAA 1302
|||||||||||||
BL02137___hom 1290 CGGTTGGAGCTAA 1302
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