Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04773 and BL02136
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:59
# Commandline: needle
# -asequence dna-align/BSNT_04773___thrC.1.5803.seq
# -bsequence dna-align/BL02136___thrC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04773___thrC-BL02136___thrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04773___thrC-BL02136___thrC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04773___thrC
# 2: BL02136___thrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1085
# Identity: 822/1085 (75.8%)
# Similarity: 822/1085 (75.8%)
# Gaps: 43/1085 ( 4.0%)
# Score: 3146.5
#
#
#=======================================
BSNT_04773___ 1 TTGGAGCTAATGTGGAAAGGACTTATCCATCAATATAAAGAATTTTTACC 50
||||||||||||||.|||||||||||||||||||.|||.||
BL02136___thr 1 ---------ATGTGGAAAGGACTCATCCATCAATATAAAGAATATTTGCC 41
BSNT_04773___ 51 TGTAACAGATCAAACACCGG------CGCT-AACTTTACATGAAGGAAAC 93
.|||||.||..||||||||| |||| ||| ||.|||||.
BL02136___thr 42 AGTAACGGACAAAACACCGGAATTGACGCTGAAC-------GAGGGAAAT 84
BSNT_04773___ 94 ACACCTCTTATTCACCTGCCGAAGCTGTCTGAGCAGCTCGGAATTGAGCT 143
||.||.||||||.|.||||..||.||.||..|..||||||||||.|||||
BL02136___thr 85 ACCCCGCTTATTTATCTGCAAAACCTTTCGAAAAAGCTCGGAATCGAGCT 134
BSNT_04773___ 144 TCATGTCAAAACGGAAGGCGTCAATCCTACGGGATCATTTAAAGATCGCG 193
|.|||||||.|||||.||.|||||.|||||.||.||.||||||||.||||
BL02136___thr 135 TTATGTCAAGACGGAGGGTGTCAACCCTACAGGCTCCTTTAAAGACCGCG 184
BSNT_04773___ 194 GAATGGTTATGGCTGTGGCAAAGGCAAAAGAAGAAGGCAATGACACGATT 243
|.|||||.|||||.||.||.|||||.|||||||||||||||||||||||.
BL02136___thr 185 GGATGGTCATGGCGGTCGCCAAGGCGAAAGAAGAAGGCAATGACACGATC 234
BSNT_04773___ 244 ATGTGCGCGTCAACAGGTAACACTTCCGCTGCTGCGGCAGCATATGCAGC 293
||||||||.||.||.||.||.||.||.|||||||||||.||.|||||.||
BL02136___thr 235 ATGTGCGCTTCGACCGGCAATACGTCGGCTGCTGCGGCGGCTTATGCGGC 284
BSNT_04773___ 294 CCGTGCTAACATGAAATGCATTGTCATCATCCCGAACGGAAAAATTGCAT 343
|||.||.||||||||.|||||.|||||.||.||..||||.|||||.||.|
BL02136___thr 285 CCGCGCCAACATGAAGTGCATCGTCATTATTCCAGACGGCAAAATCGCCT 334
BSNT_04773___ 344 TTGGAAAACTCGCTCAAGCTGTCATGTACGGAGCCGAGATTATCGCAATT 393
|.||||||.|.||.|||||.|||||||||||.||.||.||.||.||.||.
BL02136___thr 335 TCGGAAAATTGGCCCAAGCCGTCATGTACGGCGCAGAAATCATTGCGATC 384
BSNT_04773___ 394 GACGGAAACTTTGACGATGCGCTTAAAATTGTCCGTTCCATCTGTGAGAA 443
|||||||||||.||||||||.||.|||||.||.||...|||.||.|||||
BL02136___thr 385 GACGGAAACTTCGACGATGCCCTGAAAATGGTGCGCAGCATTTGCGAGAA 434
BSNT_04773___ 444 ATCACCGATTGCCCTTGTCAACTCAGTCAACCCTTACCGCATTGAAGGCC 493
|...||||||||.||.||||||||.||.||.||.|||||.||||||||.|
BL02136___thr 435 AGAGCCGATTGCGCTGGTCAACTCTGTGAATCCATACCGGATTGAAGGAC 484
BSNT_04773___ 494 AAAAAACTGCTGCCTTCGAAGTGTGCGAACAGCTGGGGGAAGCGCCTGAT 543
|.|||||.|||.||||.|||.|.||.|||||||||||.||||||||||||
BL02136___thr 485 AGAAAACCGCTTCCTTTGAAATTTGTGAACAGCTGGGCGAAGCGCCTGAT 534
BSNT_04773___ 544 GTTTTAGCGATCTCGGTCGGAAATGCTGGAAACATCACTGCGTACTGGAA 593
.|..|||||||..|.|||||||||||.||.||.||.||.||.||||||||
BL02136___thr 535 ATCCTAGCGATTCCTGTCGGAAATGCCGGTAATATAACGGCTTACTGGAA 584
BSNT_04773___ 594 GGGCTTCAAGGAATATCATGAGAAAAACGGCACAGGCCTTCCGAAAATGC 643
.|||||.||.||.||||||||||||||||||||||||||.|||...|||.
BL02136___thr 585 AGGCTTTAAAGAGTATCATGAGAAAAACGGCACAGGCCTGCCGGTCATGA 634
BSNT_04773___ 644 GCGGCTTTGAAGCTGAGGGTGCGGCGGCAATCGTGCGCAATGAAGTGATT 693
..||.|||.|.||.||.||.|||||..|.||.||....||..||||.|||
BL02136___thr 635 AGGGTTTTCAGGCGGAAGGCGCGGCCCCGATTGTCAAAAACAAAGTAATT 684
BSNT_04773___ 694 GAAAATCCGGAAACAATAGCGACAGCCATTCGTATCGGAAACCCGGCAAG 743
|||||.||||||||..|.||||||||.||..|.||||||||.|||||.||
BL02136___thr 685 GAAAAGCCGGAAACCGTTGCGACAGCGATCAGAATCGGAAATCCGGCTAG 734
BSNT_04773___ 744 CTGGGACAAAGCTGTAAAGGCAGCCGAGGAATCCAATGGGAAAATTGACG 793
||||||.|||||.||.||.||.||..|.|||||.||.||.|||||.||.|
BL02136___thr 735 CTGGGATAAAGCGGTCAACGCTGCAAAAGAATCGAACGGTAAAATCGATG 784
BSNT_04773___ 794 AAGTCACTGATGATGAAATCCTTCACGCATATCAGCTGATCGCCCGTGTA 843
.|||..|.||.||.||.||.||.|||||.||||||||..|.||..|.|.|
BL02136___thr 785 CAGTGTCAGACGAGGAGATTCTCCACGCTTATCAGCTCCTGGCAAGAGAA 834
BSNT_04773___ 844 GAAGGCGTGTTTGCAGAACCGGGTTCTTGCGCGTCTATCGCAGGAGTGCT 893
||||||||.||||||||||||||.||.|||||.||.||.||.||.|||||
BL02136___thr 835 GAAGGCGTATTTGCAGAACCGGGATCATGCGCATCCATTGCGGGCGTGCT 884
BSNT_04773___ 894 GAAACAGGTGAAATCCGGAGAAATTC---------CGAAAGGCAGCAAGG 934
|||||||.||.||.|...|||.|||| ||||| |
BL02136___thr 885 GAAACAGCTGCAAACGAAAGAGATTCAGCCGGGTGCGAAA---------G 925
BSNT_04773___ 935 TCGTAGCTGTGTTAACAGGAAACGGACTGAAAGATCCGAACACAGCGGTC 984
|.||.||.||.|||||.||||||||.||||||||||||||||||||.||.
BL02136___thr 926 TGGTTGCCGTCTTAACCGGAAACGGCCTGAAAGATCCGAACACAGCCGTT 975
BSNT_04773___ 985 GACATTTCAGAAATCAAGCCTGTCACATTGCCGACTGATGAAGACAGC-A 1033
||..|.||..|.|||||.|||||||||.|||||||.||.||||| ||| |
BL02136___thr 976 GATGTGTCGCAGATCAAACCTGTCACACTGCCGACAGACGAAGA-AGCTA 1024
BSNT_04773___ 1034 TCCTTGAATATGTAAAAGGAGCGGCCCGTGTATGA 1068
|.||.|||.|..||||||||||.||.|||||||||
BL02136___thr 1025 TTCTCGAACACTTAAAAGGAGCCGCTCGTGTATGA 1059
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