Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04767 and BL02133

See Amino acid alignment / Visit BSNT_04767 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:59
# Commandline: needle
#    -asequence dna-align/BSNT_04767___yuzD.1.5803.seq
#    -bsequence dna-align/BL02133___yuzD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04767___yuzD-BL02133___yuzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04767___yuzD-BL02133___yuzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04767___yuzD
# 2: BL02133___yuzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity:     237/340 (69.7%)
# Similarity:   237/340 (69.7%)
# Gaps:          29/340 ( 8.5%)
# Score: 770.0
# 
#
#=======================================

BSNT_04767___      1 ATGAAACCAGTCATGCTAAGC-----GTATACGGGGCAGAAACCG---TG     42
                     ||||||  |..||.||..|||     ||.|||||.||.||   ||   |.
BL02133___yuz      1 ATGAAA--AAACAAGCCGAGCTTTTTGTTTACGGTGCCGA---CGTTCTT     45

BSNT_04767___     43 TGTGCGAGCTGTGTCAATATGCCGACAGCCAAGGATACATACGAGTGGCT     92
                     |||.|.||||||||.||..|.|||.||.|.||.||.||.||.||||||||
BL02133___yuz     46 TGTCCAAGCTGTGTGAACCTTCCGTCATCAAAAGAAACGTATGAGTGGCT     95

BSNT_04767___     93 TGAGGCTGCGCTGAAAAGAAAATATCCAAATCAGCCTTTTGAAATGCA-G    141
                     .||.||.||.|||||||||||||||||..|.||||||||...||| || |
BL02133___yuz     96 AGAAGCCGCCCTGAAAAGAAAATATCCCGACCAGCCTTTCTCAAT-CACG    144

BSNT_04767___    142 TACATCGATATTTATGAGCCGCCTGACAATGAACATGCGAAAGAG-----    186
                     |||||.|||||..||.|||||||.||.||.||.|.||..|||.||     
BL02133___yuz    145 TACATTGATATCCATCAGCCGCCGGAAAACGACCCTGAAAAACAGGAAAT    194

BSNT_04767___    187 CTTGCGGAAAAAATCAGAAATGACGAGTATTTTTATCCGCTTGTGCTCGT    236
                     ||  |.|||||||||...||.|||||.||||||||||||||.||..|.||
BL02133___yuz    195 CT--CCGAAAAAATCCTGAACGACGAATATTTTTATCCGCTCGTCATGGT    242

BSNT_04767___    237 AGAAGACAAAATTGTCGGTGAAGGCAATCCAAAATTAAAAGACGTTTATG    286
                     .|..||..||.|.|||||.|||||.|||||.||..|.||||||||.|||.
BL02133___yuz    243 CGGTGATCAAGTGGTCGGCGAAGGAAATCCGAAGCTGAAAGACGTGTATA    292

BSNT_04767___    287 AGGAAATGGAGAAGCATGGGTATACAGAAAACC-GC-TGA    324
                     |.||||||||.|||||.||.|||     ||.|| || |||
BL02133___yuz    293 AAGAAATGGAAAAGCAAGGATAT-----AAGCCTGCATGA    327


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