Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00990 and BL02130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence dna-align/BSNT_00990___ydhG.1.5803.seq
# -bsequence dna-align/BL02130___ydhG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00990___ydhG-BL02130___ydhG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00990___ydhG-BL02130___ydhG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00990___ydhG
# 2: BL02130___ydhG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 400
# Identity: 277/400 (69.2%)
# Similarity: 277/400 (69.2%)
# Gaps: 56/400 (14.0%)
# Score: 984.5
#
#
#=======================================
BSNT_00990___ 1 ATGGACGTTTTTTCTGAGTATTTAGCGGGGATTGATGACCCGTTCCACCA 50
|||||.||.|||...||.|||||||||||.||||||.|.|||
BL02130___ydh 1 ATGGAAGTCTTTGAAGAATATTTAGCGGGAATTGATCATCCG-------- 42
BSNT_00990___ 51 AGAAAGAAC-------------GGAAGAGGTGTTGACTTGGATCAAAGAT 87
|||| ||||||.||.|||..||||.|....||.
BL02130___ydh 43 -----GAACATCGTGCCCGGATGGAAGAAGTATTGGGTTGGGTAGCGGAG 87
BSNT_00990___ 88 AAATATCCAAATTTACATACAGAAATAAAA-----TGGAACCAACCGATG 132
|.||.|||||||||| |..|.| |||| |||||.||.||||||
BL02130___ydh 88 ACATTTCCAAATTTA-ACGCCG----AAAATCGCTTGGAATCAGCCGATG 132
BSNT_00990___ 133 TTTACGGATCACGGTACATTTATTATTGGCTTTAGTGTTTCTAAAAAGCA 182
|||||.||||||||.|||||||||||.||||||||.||..|.|||||.||
BL02130___ydh 133 TTTACTGATCACGGCACATTTATTATCGGCTTTAGCGTCGCGAAAAATCA 182
BSNT_00990___ 183 TTTAGCTGTCGCTCCTGAAA----AAGTAACGATAGCGCACGT-----AG 223
|||.||||||||.||||||| ..|.|.|||| ||| .|
BL02130___ydh 183 TTTGGCTGTCGCCCCTGAAAGCGCTGGGATCGAT------CGTTTTTCTG 226
BSNT_00990___ 224 AGGATGATATTGTGAAGGCCGGATATGATTACACCGAGCAGCTGATACGT 273
|| ||.||||||.|||||||.||||||.|.||..|||||||..|.|||
BL02130___ydh 227 AG---GAAATTGTGCAGGCCGGCTATGATCATACGAAGCAGCTTGTCCGT 273
BSNT_00990___ 274 ATCC-CTTGGAACGGTCCAGTTGATTACACGCTACTTGAGAAAATGATTG 322
.||| ||.|||.| ||||.||.||||...|..|.||||||||||||||.|
BL02130___ydh 274 TTCCGCTGGGATC-GTCCGGTGGATTTTTCATTGCTTGAGAAAATGATCG 322
BSNT_00990___ 323 AGTTTAATATTCTGGATAAGGCGGACTGCTCCACTTTTTGGCGGAAATGA 372
|||||||||||..||||||||||||||||||.||||||||||||||||.|
BL02130___ydh 323 AGTTTAATATTGCGGATAAGGCGGACTGCTCGACTTTTTGGCGGAAATAA 372
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