Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00990 and BL02130

See Amino acid alignment / Visit BSNT_00990 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence dna-align/BSNT_00990___ydhG.1.5803.seq
#    -bsequence dna-align/BL02130___ydhG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00990___ydhG-BL02130___ydhG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00990___ydhG-BL02130___ydhG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00990___ydhG
# 2: BL02130___ydhG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 400
# Identity:     277/400 (69.2%)
# Similarity:   277/400 (69.2%)
# Gaps:          56/400 (14.0%)
# Score: 984.5
# 
#
#=======================================

BSNT_00990___      1 ATGGACGTTTTTTCTGAGTATTTAGCGGGGATTGATGACCCGTTCCACCA     50
                     |||||.||.|||...||.|||||||||||.||||||.|.|||        
BL02130___ydh      1 ATGGAAGTCTTTGAAGAATATTTAGCGGGAATTGATCATCCG--------     42

BSNT_00990___     51 AGAAAGAAC-------------GGAAGAGGTGTTGACTTGGATCAAAGAT     87
                          ||||             ||||||.||.|||..||||.|....||.
BL02130___ydh     43 -----GAACATCGTGCCCGGATGGAAGAAGTATTGGGTTGGGTAGCGGAG     87

BSNT_00990___     88 AAATATCCAAATTTACATACAGAAATAAAA-----TGGAACCAACCGATG    132
                     |.||.|||||||||| |..|.|    ||||     |||||.||.||||||
BL02130___ydh     88 ACATTTCCAAATTTA-ACGCCG----AAAATCGCTTGGAATCAGCCGATG    132

BSNT_00990___    133 TTTACGGATCACGGTACATTTATTATTGGCTTTAGTGTTTCTAAAAAGCA    182
                     |||||.||||||||.|||||||||||.||||||||.||..|.|||||.||
BL02130___ydh    133 TTTACTGATCACGGCACATTTATTATCGGCTTTAGCGTCGCGAAAAATCA    182

BSNT_00990___    183 TTTAGCTGTCGCTCCTGAAA----AAGTAACGATAGCGCACGT-----AG    223
                     |||.||||||||.|||||||    ..|.|.||||      |||     .|
BL02130___ydh    183 TTTGGCTGTCGCCCCTGAAAGCGCTGGGATCGAT------CGTTTTTCTG    226

BSNT_00990___    224 AGGATGATATTGTGAAGGCCGGATATGATTACACCGAGCAGCTGATACGT    273
                     ||   ||.||||||.|||||||.||||||.|.||..|||||||..|.|||
BL02130___ydh    227 AG---GAAATTGTGCAGGCCGGCTATGATCATACGAAGCAGCTTGTCCGT    273

BSNT_00990___    274 ATCC-CTTGGAACGGTCCAGTTGATTACACGCTACTTGAGAAAATGATTG    322
                     .||| ||.|||.| ||||.||.||||...|..|.||||||||||||||.|
BL02130___ydh    274 TTCCGCTGGGATC-GTCCGGTGGATTTTTCATTGCTTGAGAAAATGATCG    322

BSNT_00990___    323 AGTTTAATATTCTGGATAAGGCGGACTGCTCCACTTTTTGGCGGAAATGA    372
                     |||||||||||..||||||||||||||||||.||||||||||||||||.|
BL02130___ydh    323 AGTTTAATATTGCGGATAAGGCGGACTGCTCGACTTTTTGGCGGAAATAA    372


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