Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04821 and BL02127
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence dna-align/BSNT_04821___yurI.1.5803.seq
# -bsequence dna-align/BL02127___bsn.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04821___yurI-BL02127___bsn.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04821___yurI-BL02127___bsn.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04821___yurI
# 2: BL02127___bsn
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 926
# Identity: 574/926 (62.0%)
# Similarity: 574/926 (62.0%)
# Gaps: 172/926 (18.6%)
# Score: 1733.5
#
#
#=======================================
BSNT_04821___ 1 ATGACAAAAAAAG-----CATGGTTTCTGCCGCTCGTCTGTGTATT---A 42
|||| |...|||| ||| ||.||.|||| |
BL02127___bsn 1 ATGA-ACCGAAAGTGTGTCAT---------------TCCGTTTATTTTGA 34
BSNT_04821___ 43 CTGATTTCCG-GATG-GCTTGCGCCTGCAGCTTCAGCAAGCGCGCAAACC 90
||.|.||.| |||| || ||||| |||.||||.|
BL02127___bsn 35 -TGTTGTCGGCGATGTGC--GCGCC---------------CGCCCAAAAC 66
BSNT_04821___ 91 GCATTAAGCCTTAATGACCGATTGGCGTCTTCCCCTTCTGGAACAGGAAG 140
||| || ||| ||||| ||
BL02127___bsn 67 GCA----------------GA--GGC--CTTCC---------------AG 81
BSNT_04821___ 141 CCTTCTCTCATTAGCCGCCCCCGCTGC-ACCCTATGCTGACACAGATACC 189
||..|.||.|||.||| |.| |.|||..|||....|||||
BL02127___bsn 82 -CTGTTTTCCTTACCCG-------TACAATCCTCGGCTCCGGCAGAT--- 120
BSNT_04821___ 190 TATTATGAAGGGGCTGAAGGTAAAACAGGAGACTCGCTAAAAAGCACCCT 239
||.||.|||..|||..|.||.||||||||.||..|..|||||.|..|.||
BL02127___bsn 121 TACTACGAACAGGCGCAGGGCAAAACAGGTGAAGCTTTAAAACGAGCGCT 170
BSNT_04821___ 240 GCACCGCATTATCAGCGGACAC-----ACGAT--------GCTGTCCTAC 276
.||| ||||| ||||| ||||||.|||
BL02127___bsn 171 TCAC-------------GACACAATCGACGATCATCGAGAGCTGTCTTAC 207
BSNT_04821___ 277 AGCGAAGTGTGGAACGCGCTGAAAGAAACGGATGAAGATCCGAGAAATCC 326
|||||.||.|||.|.||||||||||.||||||||||||||||...||||.
BL02127___bsn 208 AGCGAGGTATGGGAAGCGCTGAAAGCAACGGATGAAGATCCGGCCAATCG 257
BSNT_04821___ 327 GAATAACGTCATCCTGCTCTATACGAATGAATCGCGGTCCAAAAACCTGA 376
.||.|||||.||.|||.|.|||.|.|..||.|||||.||.|||.|...||
BL02127___bsn 258 AAACAACGTGATACTGTTATATTCCAGAGAGTCGCGCTCTAAACAGGCGA 307
BSNT_04821___ 377 ACGGCGG--CAATGTCGGCGATTGGAACCGCGAGCATGTCTGGGCGAAAT 424
||||.|| .||.| ||||||||||||||||||||.||.|||||.||||
BL02127___bsn 308 ACGGGGGGCAAACG--GGCGATTGGAACCGCGAGCACGTATGGGCAAAAT 355
BSNT_04821___ 425 CCCATGGCGATTTTGGCACGAGCAAGGGACCTGGTACTGATATTCATCAT 474
|.||.||.|||||.||.||.|||||.|||||.||.||.|||.|.|||||.
BL02127___bsn 356 CGCACGGTGATTTCGGGACAAGCAAAGGACCCGGGACAGATTTGCATCAC 405
BSNT_04821___ 475 TTGC--GCCCGGCTGATGTTCAAGTTAACAGCGCCAGAGGAAATATGGAT 522
.| | ||||.|| |||||.|||||||||..||||.|.|||||..|.|||
BL02127___bsn 406 CT-CAGGCCCAGC-GATGTGCAAGTTAACGCCGCCCGCGGAAACCTTGAT 453
BSNT_04821___ 523 TTTGACAATGGCGGCA----CTGAATATGC--GAAGGCACCCGGAAATTA 566
||||||.|.||||||| | |||.| || ||.||||||||.||
BL02127___bsn 454 TTTGACGAAGGCGGCAGCCCC----TATCCCGGA--GCTCCCGGAAACTA 497
BSNT_04821___ 567 TTATGACGGCGATTCATGGGAGCCCCGCGATGA------TGTGAAAGGCG 610
.||||||||||||||.|||||.|| ||| ..|.|||||||
BL02127___bsn 498 CTATGACGGCGATTCCTGGGAACC------TGACAAAAGCATCAAAGGCG 541
BSNT_04821___ 611 ATGTTGCCCGCATGCTGTTTTACATGGCTGTCCGTTACGAGGGTGATGAC 660
||||.|||.|.|||.|.||.||.|||||.|||||.||.||.||.||.|||
BL02127___bsn 542 ATGTCGCCAGAATGATTTTCTATATGGCGGTCCGCTATGAAGGGGACGAC 591
BSNT_04821___ 661 GGCTATCCTGATCTTGAGCTTAATG----ATAAGACAGGCAACGGCTCAG 706
||..||||.|||||||| |||| |||..||...||||||.||..
BL02127___bsn 592 GGTCATCCGGATCTTGA----AATGAACAATACAACGAACAACGGGTCTA 637
BSNT_04821___ 707 CTCCTTATCATGGCAAACAATCTGTCCTGCTCGAATGGAATAAGCAGGAT 756
..||.||.||.||.|||...||.||..|..|..|||||.||.|..|.||.
BL02127___bsn 638 AACCGTACCACGGAAAAATGTCGGTTTTATTGAAATGGCATCATGAAGAC 687
BSNT_04821___ 757 CCGGTTGACGACCGCGAGCGGAAAAGAAATGAAATCATTTATGAAAAATA 806
||.||.||.|.||.|||..|.||..|.||.||.|||||.|||.|..||||
BL02127___bsn 688 CCTGTCGATGCCCTCGAAAGAAAGCGGAACGATATCATCTATCAGCAATA 737
BSNT_04821___ 807 TCAGCACAACCGCAATCCATTTATCGACCACCCTGAATGGGCGGATGAGA 856
.|||||.|||||||||||.||.||.||.|||||||||||||||||.||.|
BL02127___bsn 738 CCAGCATAACCGCAATCCGTTCATTGATCACCCTGAATGGGCGGAGGATA 787
BSNT_04821___ 857 TTT-------GGCCGT----AA---- 867
||| ||.||| ||
BL02127___bsn 788 TTTGGGGCTCGGGCGTTTTGAATTGA 813
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