Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04782 and BL02120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:00
# Commandline: needle
# -asequence dna-align/BSNT_04782___yutC.1.5803.seq
# -bsequence dna-align/BL02120___yutC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04782___yutC-BL02120___yutC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04782___yutC-BL02120___yutC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04782___yutC
# 2: BL02120___yutC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 712
# Identity: 413/712 (58.0%)
# Similarity: 413/712 (58.0%)
# Gaps: 167/712 (23.5%)
# Score: 1121.0
#
#
#=======================================
BSNT_04782___ 1 ATGA--AACGAACCGCTGTCAGC-----------CTCTGCCTGCTAACCG 37
|||| ||..||...||.|.||| |.||||||
BL02120___yut 1 ATGAATAAAAAAATTCTTTTAGCAGGGCTGGTGGCGCTGCCT-------- 42
BSNT_04782___ 38 GACTATTATCCGGGTGCGGAGGCGCAGGATT---GGATAATGCACAAAAT 84
|||.|.||.||| .||.|| |..|| .||||..|.|||.|||
BL02120___yut 43 -----TTAGCAGGCTGC-CAGACG--GCCTTAAACGATACCGAACACAAT 84
BSNT_04782___ 85 GTCCGGAATCAGACGCAGAATCAAACCAAACCCATTCATGTGTCGGA--- 131
.| ||..||||.|||...| ||..||.||||.||..|.||
BL02120___yut 85 AT-----ATATGACGAAGACGGA----AATACCGTTCACGTTGCAGACAA 125
BSNT_04782___ 132 ----CCGCAACGAGGCTTTTAACAGGCA--------TAATGAGAA-CGAA 168
||.||| ||.||||.| .|||||.|| ||||
BL02120___yut 126 GAACCCTCAA---------TATCAGGAAAAGTTCAGAAATGACAACCGAA 166
BSNT_04782___ 169 CA-----ATTTGGCTATGTCCGCTATCAAAGAGAACA--ATTTGACGGAG 211
.| |||.||.||||..|||.||| ||..|||| | |.||.|.
BL02120___yut 167 AAGGCAGATTCGGATATGCGCGCCATC--AGGCAACACCA---GTCGCAA 211
BSNT_04782___ 212 ACCAGCAGAAAACGCCGGTG------ATGAACCGGGAAGAAACCGCTCAC 255
||.||.|..|||.||.||.| ||..||||||||||||..||.||.
BL02120___yut 212 ACAAGGAAGAAATGCAGGCGCCCCAAATCGACCGGGAAGAAATGGCGCAT 261
BSNT_04782___ 256 ATGATATCAAGTTTAACGGTTCAGCTCCCCCATATTCAAGATGCTGCGAC 305
||.|||||.|||||||||||||||||.|||.|||||||||||||..||.|
BL02120___yut 262 ATTATATCTAGTTTAACGGTTCAGCTTCCCAATATTCAAGATGCGTCGGC 311
BSNT_04782___ 306 ATTGGTGACTGACCGAGAAGCGCTTGTCGTATACAAAACCGATTCTAAAA 355
..|.|||||.|||..|||.|||||.|||||.||||||||.||.|
BL02120___yut 312 GCTTGTGACAGACGAAGAGGCGCTAGTCGTGTACAAAACGGACT------ 355
BSNT_04782___ 356 ACCGGG-------AGCTGACCGCCGATCAGGTGAAAAAAACAGCGGCTTC 398
||||| |.|.|||.||.|||||.||.|||||.||.|||||.||
BL02120___yut 356 -CCGGGCAGCGCAAACAGACGGCTGATCAAGTCAAAAAGACGGCGGCATC 404
BSNT_04782___ 399 CGTGATACCGCGATACTATCACGTGTATATTTCCGATAATCCAAACCAT- 447
|||..|.|||.||||.||.||..|.||||||||||||.||||..| |||
BL02120___yut 405 CGTCGTTCCGAGATATTACCATATCTATATTTCCGATGATCCGGA-CATG 453
BSNT_04782___ 448 ATGCAGTCCGTCGAAAATTACAGCAATCTCGGCTCTGG------TTCAAG 491
|||||.|||||||..||||.|||| ||||| ||| ||||||
BL02120___yut 454 ATGCAATCCGTCGCTAATTTCAGC-----CGGCT-TGGAGCCAATTCAAG 497
BSNT_04782___ 492 GGATATCAGAGAGATC-----ATGTCGGGGACGATTCAAGAAATGAAAAC 536
..|..|| |||| |||.|.|..||.|||.|.||||||.|||.
BL02120___yut 498 AAACGTC-----GATCAGCTGATGGCCGATACAATTAAGGAAATGCAAAA 542
BSNT_04782___ 537 CTCCCCGCAAGG--AAGCC----CTGTCTCAGAGAATGAAAATGCCAATG 580
.||.|||||||| ||.|| |.|...||| |||||||.|
BL02120___yut 543 ATCGCCGCAAGGCAAAACCACGACAGGTACAG---ATGAAAACG------ 583
BSNT_04782___ 581 GAGAAACGCGTCAGGACAT-----GAAAATCGATAGGAATGACAAAAACG 625
||||| |||.| |||| ||| |||..||
BL02120___yut 584 --GAAAC-------GACCTTGACGGAAA------AGG------AAAGGCG 612
BSNT_04782___ 626 CCAGA----TGA 633
.|.|| |||
BL02120___yut 613 ACCGAATCTTGA 624
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