Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05197 and BL02117
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:19
# Commandline: needle
# -asequence dna-align/BSNT_05197___padC.1.5803.seq
# -bsequence dna-align/BL02117___padC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05197___padC-BL02117___padC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05197___padC-BL02117___padC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05197___padC
# 2: BL02117___padC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 501
# Identity: 393/501 (78.4%)
# Similarity: 393/501 (78.4%)
# Gaps: 15/501 ( 3.0%)
# Score: 1571.5
#
#
#=======================================
BSNT_05197___ 1 ----------ATGGAAA--ACTTTATCGGAAGCCACATGATTTATACGTA 38
|||.||| |.|||.|.||||||||.|||||.||||||||
BL02117___pad 1 ATGAATCAAGATGTAAAAGAGTTTGTAGGAAGCCATATGATCTATACGTA 50
BSNT_05197___ 39 TGAAAACGGCTGGGAATACGAGATTTATATTAAAAACGACCATACAATTG 88
|||||||||.||||||||.||.||.||.||||||||.||||||||.||.|
BL02117___pad 51 TGAAAACGGATGGGAATATGAAATCTACATTAAAAATGACCATACCATCG 100
BSNT_05197___ 89 ATTATAGAATTCATAGCGGAATGGTTGCCGGACGCTGGGTTCGGGATCAG 138
||||..|.|||||.|||||||||||||..||||||||||||||.|||||.
BL02117___pad 101 ATTACCGCATTCACAGCGGAATGGTTGGGGGACGCTGGGTTCGCGATCAA 150
BSNT_05197___ 139 GAAGTGAATATTGTCAAACTGACAGAAGGCGTATATAAAGTGTCTTGGAC 188
.|||...||||.|||||.|||||.||||||||.||||||||.||.|||||
BL02117___pad 151 AAAGCCGATATCGTCAAGCTGACTGAAGGCGTCTATAAAGTATCCTGGAC 200
BSNT_05197___ 189 AGAGCCGACTGGCACGGATGTTTCATTAAACTTTATGCCAAATGAAAAAC 238
|||.|||||.||.||.||.|||||.||.|||||.|||||.||||||||.|
BL02117___pad 201 AGAACCGACAGGGACTGACGTTTCCTTGAACTTCATGCCGAATGAAAAGC 250
BSNT_05197___ 239 GCATGCACGGCATTATTTTCTTCCCGAAATGGGTGCATGAACATCCTGAA 288
|.|||||||||||.||.||||||||.||||||||.|||||||..|||||.
BL02117___pad 251 GGATGCACGGCATCATCTTCTTCCCTAAATGGGTTCATGAACGCCCTGAT 300
BSNT_05197___ 289 ATTACGGTTTGCTACCAAAATGACCACATTGATTTGATGAAAGAATCCCG 338
|||||.||.|||||.|||||||||||.||.||.||.|||.|.|||||.||
BL02117___pad 301 ATTACAGTCTGCTATCAAAATGACCATATCGACTTAATGGAGGAATCGCG 350
BSNT_05197___ 339 CGAAAAATATGAAACGTATCCAAAATACGTTGTACCTGAATTTGCGGAAA 388
||||||||||||.||||||||||||||.||.|||||.|||||.||.||.|
BL02117___pad 351 CGAAAAATATGAGACGTATCCAAAATATGTCGTACCGGAATTCGCCGATA 400
BSNT_05197___ 389 TTACATTTCTGAAAAATGAAGGAGTCGACAACGAAGAAGTGATTTCGAAG 438
|.||||||.|..||||||..|||.||||.||.|||||..|||||||.||.
BL02117___pad 401 TCACATTTATTGAAAATGCCGGAATCGATAATGAAGATCTGATTTCAAAA 450
BSNT_05197___ 439 GCTCCTTATGAGGGAATGACAGACGATATTCGCGCGGGAA---GATTATA 485
||.||||||...||||||||.||.||.||..|.||.|||| |..||||
BL02117___pad 451 GCCCCTTATCCCGGAATGACGGATGACATCAGGGCAGGAAAGCGGGTATA 500
BSNT_05197___ 486 A 486
|
BL02117___pad 501 A 501
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