Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04765 and BL02116
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:59
# Commandline: needle
# -asequence dna-align/BSNT_04765___yutJ.1.5803.seq
# -bsequence dna-align/BL02116___yutJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04765___yutJ-BL02116___yutJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04765___yutJ-BL02116___yutJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04765___yutJ
# 2: BL02116___yutJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1081
# Identity: 815/1081 (75.4%)
# Similarity: 815/1081 (75.4%)
# Gaps: 26/1081 ( 2.4%)
# Score: 2988.0
#
#
#=======================================
BSNT_04765___ 1 ATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGTGTTCT 50
||||.|||.||.||||||.|||||||.||.||||||||.|||||..|..|
BL02116___yut 1 ATGAGAAATTTAGTCTTGCTCGGCGGCGGATACGGGAATATGCGCATCAT 50
BSNT_04765___ 51 TCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAA 100
||||||.||..||||.||.||||||||.||||||||....|||||.||||
BL02116___yut 51 TCATCGTTTGCTGCCTAATCAGCTGCCAGATGATGTGATGATCACTTTAA 100
BSNT_04765___ 101 TTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCC 150
|.||||||||.|||||.||.||.||.|||||.||.||.||.||.||.||.
BL02116___yut 101 TCGACAGAAACCCTTACCATTGTTTAAAAACGGAGTACTACGCACTGGCT 150
BSNT_04765___ 151 GCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCC 200
||.||.||.|||||.||.|||||||||||||||||.|||||.||.|||||
BL02116___yut 151 GCGGGGACGATTTCCGATCATCATATCAGAGTGTCCTTCCCGGATCACCC 200
BSNT_04765___ 201 TCGCCTGGATG-------TCCAATACGG--TGATATCACATCAATTGATA 241
||.| |..||||||| .|||.| |.||..|||||.
BL02116___yut 201 -------GAAGTTAAAGATTGAATACGGGACGATTT--CGTCTGTTGATT 241
BSNT_04765___ 242 TTGTACAAAAACAAGTGCTGTTCCAAGATCGTGAACCGATTTCTTACGAT 291
|.|.|..||||.|.||..||||.||.||..|.||.|||.|.||.||.|||
BL02116___yut 242 TGGAAGGAAAAAAGGTTTTGTTTCATGACAGGGAGCCGGTATCCTATGAT 291
BSNT_04765___ 292 GACGCCGTAATCGGGCTCGGCTGTGAGGATAAATATCACAACGTGCCGGG 341
||||||||.|||||.|||||||||||.|||||||||||||||||.||.||
BL02116___yut 292 GACGCCGTCATCGGACTCGGCTGTGAAGATAAATATCACAACGTTCCCGG 341
BSNT_04765___ 342 AGCGCCTGAATTCACCTACAGTATTCAAACCATCGATCAGTCCCGCGAAA 391
.|||||||||...||||||||.|||||.||.||||||||.||.|||...|
BL02116___yut 342 GGCGCCTGAACATACCTACAGCATTCAGACAATCGATCAATCACGCAGCA 391
BSNT_04765___ 392 CCTACCAAAAGCTGAATAATCTGAGCGCTAATGCCACCGTCGCCATTGTC 441
|.|||||...|||.||.||..|.|..||..|.||||||||.||.||.|||
BL02116___yut 392 CGTACCAGGCGCTCAACAACTTAAATGCGGAAGCCACCGTTGCGATCGTC 441
BSNT_04765___ 442 GGAGCGGGCTTAAGCGGCGTTGAGCTTGCAAGTGAATTGAGAGAAAGCCG 491
||.||.||..|.|||||||||||||||||.||.||..||||.||||||||
BL02116___yut 442 GGGGCAGGACTGAGCGGCGTTGAGCTTGCGAGCGAGCTGAGGGAAAGCCG 491
BSNT_04765___ 492 TGATGACCTGAACATTATTTTGTTCGACCGCGG-TAATCTCATTTTATCA 540
..|.||..|||||||.||..|.||.|||||.|| .||| |.|||||.||.
BL02116___yut 492 AAAAGATTTGAACATCATCCTTTTTGACCGGGGAGAAT-TAATTTTGTCG 540
BSNT_04765___ 541 AGCTTTCCCG-AGCGTTTAAGCAAATATGTGCAAAAATGGTTCGAAGAGC 589
||| |||||| |||||||.||||||||||||||||..|||||.|||||||
BL02116___yut 541 AGC-TTCCCGAAGCGTTTGAGCAAATATGTGCAAAGCTGGTTTGAAGAGC 589
BSNT_04765___ 590 ACGGTGTCCGCATTATTAACAGGGCAAATATCACAAAAGTAGAAGAAGGC 639
||||.|||...|||||.|||.|.||.|||||.|||||.||.|||||||||
BL02116___yut 590 ACGGCGTCAAGATTATCAACTGCGCCAATATTACAAAGGTGGAAGAAGGC 639
BSNT_04765___ 640 GTTGTGTATAACCACGATGATCCGATTTCTGCAGACGCCATCGTGTGGAC 689
.|.||.||.||.||.||.||.|||||....||.|||||||||||.|||||
BL02116___yut 640 ATCGTCTACAATCATGACGACCCGATCCAAGCCGACGCCATCGTCTGGAC 689
BSNT_04765___ 690 AGCCGGCATCCAGCC-AAACAAAGTCGTCAGAGACTTAGATGTGGAGAAG 738
|||.||.||.||||| ||.|||| ||||..|.||..|.||||||||.||.
BL02116___yut 690 AGCGGGGATACAGCCGAATCAAA-TCGTTCGGGATCTCGATGTGGAAAAA 738
BSNT_04765___ 739 GACGCACAAGGGCGTATTGTATTAACGCCTCATCATAATCTTCCAGGTGA 788
||..|.||||||||..|.||..|.|||||.||.|||||.||.||.||.||
BL02116___yut 739 GATCCGCAAGGGCGCGTCGTCCTGACGCCGCACCATAACCTGCCGGGAGA 788
BSNT_04765___ 789 TGAACATCTGTACGTTGTCGGCGATTGCGCCAGCCTTCCTCATGCACCGA 838
.|||||..|.||.|||||||||||.||.||.|||||.|||||.||.||||
BL02116___yut 789 CGAACACGTTTATGTTGTCGGCGACTGTGCAAGCCTGCCTCACGCGCCGA 838
BSNT_04765___ 839 GCGCCCAGCTGGCAGAGGCTCAAGCAGAGCAGATTGTCCAAAT-CTTGCA 887
||||.||||||||.||.||.||.||.||.||.||.||||||.| |||| |
BL02116___yut 839 GCGCACAGCTGGCCGAAGCCCAGGCGGAACAAATCGTCCAAGTGCTTG-A 887
BSNT_04765___ 888 AAAACGCTGGAATGGGGAAGCCCTGCCTGAATCAATGCCTCAGTTTAAGC 937
|...||||||||.||.|||.|.||.||||||.|||||||..|.||.||||
BL02116___yut 888 ACTGCGCTGGAAAGGCGAACCTCTTCCTGAAACAATGCCGAAATTCAAGC 937
BSNT_04765___ 938 TGAAAGGCGTCCTCGGTTCACTCGGAAAAAAAGCCGGCTTCGGGCTTGTT 987
||||||||||||||||.||.|||||.|||||||||||.|||||..|.|||
BL02116___yut 938 TGAAAGGCGTCCTCGGGTCGCTCGGCAAAAAAGCCGGTTTCGGTTTAGTT 987
BSNT_04765___ 988 GCTGACCGTCCGCTGATCGGCCGTGTTCCGCGTATGCTGAAATCCGGCTT 1037
|||||.||.|||.||||||||.|.||.||.||..||||||||||||||||
BL02116___yut 988 GCTGAACGGCCGTTGATCGGCAGAGTGCCTCGCCTGCTGAAATCCGGCTT 1037
BSNT_04765___ 1038 GCTGTGGATGTATAAACACCATAACGGTTAA 1068
|||.|||||||||||.||.||||||||.||.
BL02116___yut 1038 GCTTTGGATGTATAAGCATCATAACGGGTAG 1068
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