Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03786 and BL02114
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence dna-align/BSNT_03786___yqeW.1.5803.seq
# -bsequence dna-align/BL02114.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03786___yqeW-BL02114.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03786___yqeW-BL02114.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03786___yqeW
# 2: BL02114
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 988
# Identity: 642/988 (65.0%)
# Similarity: 642/988 (65.0%)
# Gaps: 116/988 (11.7%)
# Score: 1956.5
#
#
#=======================================
BSNT_03786___ 1 ATGTTAATTCTGATTAGCTTTACTGCTCTTAT-----ATTATTC--TTTC 43
|||.|.||..|||| || ||.||.||| ||..||| ||||
BL02114 1 ATGATGATCTTGAT---CT----TGTTCGTATTATTGATCGTTCTTTTTC 43
BSNT_03786___ 44 TCACAGGCATGAACATGCTTCGAAAAGGCTTAATTTCTATGGCGTACT-- 91
|||.||||||||.||||||..||||||||.|.||||| |||
BL02114 44 TCAAAGGCATGAGCATGCTGAGAAAAGGCCTGATTTC--------ACTAA 85
BSNT_03786___ 92 ------CAAAAATTGAAGATCGTTTGCTTTTATTTACAGACCATCCGTTA 135
.||||||.|||.|.||..||||.||.||.||.||.||||||.|.
BL02114 86 CATTTGAAAAAATCGAAAAGCGGCTGCTGTTTTTCACGGATCATCCGGTG 135
BSNT_03786___ 136 AAAGCGTTTCTTATCAGCATTGTATTTACGGGGATACTTCAGAGCAGTTC 185
|||||.|||.|..||||.|||.|||||||||||||..|.||.|||||.||
BL02114 136 AAAGCTTTTTTGGTCAGTATTATATTTACGGGGATTTTGCAAAGCAGCTC 185
BSNT_03786___ 186 AGCCTTTATGGTCATTGTCATCGGCTTTG--TAAGTGCGGGCGTTCTTTC 233
.||.||||||||.||.|||||.||.|||| |.||| .||||.||||||
BL02114 186 GGCATTTATGGTGATCGTCATAGGGTTTGTCTCAGT--AGGCGCTCTTTC 233
BSNT_03786___ 234 TTTTAAGCGGACGATACCGATGATTCTGGGGACAAATGTTGGCTCTACTT 283
.|||||.||..||||.|||.|.|||.|.||||||||..|.||.||.||||
BL02114 234 ATTTAAACGTTCGATTCCGCTCATTTTAGGGACAAACATCGGGTCCACTT 283
BSNT_03786___ 284 TTACAACTGAATTTATTGCTATCAAAATGGATATTTTGATTTGGGTTCTT 333
|.|||||.||||||.|.||..|.||..||||..|||||||||..|..|||
BL02114 284 TCACAACGGAATTTTTGGCGGTGAAGCTGGAATTTTTGATTTTTGCCCTT 333
BSNT_03786___ 334 TTAATAGG----AGGTTTATTG-TTTTTTC--TGACTGGCAGGTATCCTT 376
|| || ||||..| | |.||||| || |.||.|..|..||||
BL02114 334 TT----GGCCGCAGGTGCA--GCTCTTTTCATTG-CCGGAAAATCCCCTT 376
BSNT_03786___ 377 TGAAACAGCTGGGAACAAGCTTCCTCGGACTGGGCATCATCTTCTTTTGC 426
|....||..|.||...||||.|..||||..||||..|.||.||.||.||.
BL02114 377 TTCGGCAAGTCGGCGTAAGCATGATCGGCTTGGGGGTTATTTTTTTCTGT 426
BSNT_03786___ 427 ATCAGCGGATTCAGCCACCTTGCCGGGCCGCTGACGAAGCTGAAAACGGG 476
||||||||.|||||||..|||||||.||||.||.|..||||..|..||||
BL02114 427 ATCAGCGGTTTCAGCCGGCTTGCCGTGCCGTTGTCACAGCTAGACTCGGG 476
BSNT_03786___ 477 AGCCGACGTTCTAT-----ACCATGTTAACGATTCAAACTGG---TCCGC 518
.|| ||.||| |.|.||...|.|||||| |.| |.|||
BL02114 477 CGC-----TTATATCGTGCAGCTTGCCGAAGATTCA---TCGCTTTACGC 518
BSNT_03786___ 519 TTTGCTCATCGGCATGGTGTTAACTGCCATCATTCACTCCAGTTCTGTCT 568
||||.|||||||||..||.||.||.||.||.|||||.||||||||.|..|
BL02114 519 TTTGTTCATCGGCACCGTTTTGACCGCGATGATTCATTCCAGTTCGGCGT 568
BSNT_03786___ 569 GTATCGGCATTTTGATGAGTTTTATGAATGAAGGGATTATCGGACTGACA 618
||.|||||||..|||||||.||||||.||.||||..|..|||||.||||.
BL02114 569 GTGTCGGCATCCTGATGAGCTTTATGGATCAAGGTGTCGTCGGATTGACC 618
BSNT_03786___ 619 CAGGCGATGAGCGTCGTACTCGGATCAAATATCGGGACATGCATTACAGC 668
.|.|||||||||||.||.||.||.||.||.|||||||||||||||||.||
BL02114 619 GAAGCGATGAGCGTTGTTCTTGGCTCCAACATCGGGACATGCATTACGGC 668
BSNT_03786___ 669 TGTCATGGCTGCTGTATCC------GGTGGATATGCGGCGAAACAGACAG 712
.||.||||| |||| ||.|||..|||.||.|..||.||||
BL02114 669 CGTGATGGC------ATCCTTCAAAGGCGGAGCTGCAGCCAGGCAAACAG 712
BSNT_03786___ 713 CGTATGCGCATGTGGTATTTAACGTGCTAGGGGTGGC-TCTAGTATTGCC 761
|.|||||.|||||..|.|||||.||..|.||.||.|| .|| ||||..||
BL02114 713 CTTATGCCCATGTTCTGTTTAATGTCATTGGTGTAGCAGCT-GTATACCC 761
BSNT_03786___ 762 TTTTCTGACCGCAGCGACCGGCTTTGTAGAGCAGTTATCACCCGATCCTG 811
|.|.||..|..||...||.|||| |||||.||.|| |||
BL02114 762 TCTGCTCTCATCAATCACAGGCT-----------TTATCTCCGGA--CTG 798
BSNT_03786___ 812 -CCCAAAG------------GATTGCTCATTTCAGCCTTTTATTTAATGT 848
||.|||| ||||||.|||||||||||..|.||.||.||
BL02114 799 TCCGAAAGCCCCGCCCAGCAGATTGCCCATTTCAGCCTGCTGTTCAACGT 848
BSNT_03786___ 849 AGTAACAGCTCTTTTATTTCTTCCGCTTACAAACTTGTTTTA-CCGCT-- 895
.||.||..|.||.||.|||.|.|||||..||||..|||||.| .||||
BL02114 849 CGTCACGTCCCTATTGTTTTTGCCGCTCTCAAATCTGTTTCATTCGCTGA 898
BSNT_03786___ 896 ---TGATTCACCTTC------TTATCCCGGCTAAATAA 924
||.|||.|.||| ..|.||.|||...||||
BL02114 899 TCATGTTTCTCATTCCAAACAAAAACCAGGCCCGATAA 936
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