Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03812 and BL02111
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence dna-align/BSNT_03812___comER.1.5803.seq
# -bsequence dna-align/BL02111___comER.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03812___comER-BL02111___comER.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03812___comER-BL02111___comER.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03812___comER
# 2: BL02111___comER
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 849
# Identity: 603/849 (71.0%)
# Similarity: 603/849 (71.0%)
# Gaps: 54/849 ( 6.4%)
# Score: 1974.0
#
#
#=======================================
BSNT_03812___ 1 TTGAAGATAGGCTTTATCGGCACAGGAAATATGGGTACGATCCTTATCGA 50
|||||.||.|||||||||||.||||||||||||||.||.||..|.||.||
BL02111___com 1 TTGAATATCGGCTTTATCGGGACAGGAAATATGGGGACCATTTTAATTGA 50
BSNT_03812___ 51 ATCATTTATTGAATCAAAAGCAGCCGATCCCTCAAACATGACAATCACAA 100
..|.||.||||||||.|.|||.|.|..|||||||....|.|||||.||.|
BL02111___com 51 GGCGTTGATTGAATCCAGAGCGGTCATTCCCTCATCTTTAACAATTACTA 100
BSNT_03812___ 101 ACCGCACAATTGAAAAAGCGTTGCACATAAAAAACCGCTACAACAG-CAT 149
||||.||.||.||.||||||||..||||||||||.||.|.| .||| |||
BL02111___com 101 ACCGAACGATCGACAAAGCGTTAAACATAAAAAAACGATTC-CCAGACAT 149
BSNT_03812___ 150 AAACGTTACCGAAAGTCTCGAA-AAGCTCGTTTCTGAAAACGAGATG--A 196
..|.|||.|.|||.|.|..||| ||| |..||.|.|||| |.|||| .
BL02111___com 150 TCAGGTTGCAGAACGGCCGGAAGAAG-TGATTACGGAAA--GTGATGCCG 196
BSNT_03812___ 197 TTTTTATTTGTGTTAAGCCGCTTGATATATATCCTTTACTGGCAAGA--G 244
|.|||||.|||||.||||||||.|||||.||||||||.|| ||.| |
BL02111___com 197 TGTTTATCTGTGTAAAGCCGCTGGATATTTATCCTTTGCT---AAAACGG 243
BSNT_03812___ 245 CGTT-ACCTTATTTAAGAAAAGATCATATTCTCATCTCAATTACAAGCCC 293
|.|| |||....||.|.....|||||.|.|.|..|..|.|||||.||.||
BL02111___com 244 CTTTCACCCGTCTTCACCCGCGATCAGACTGTGGTAACCATTACGAGTCC 293
BSNT_03812___ 294 CGTTCAAACCGAACAGCTCG-AACAATATGTGCCGTGTCAAGTGGCTCGA 342
.||.||...|||||||||.| |||.|| .||..|.||.||.|.|||..||
BL02111___com 294 GGTGCAGGTCGAACAGCTGGAAACCAT-CGTCTCCTGCCAGGCGGCAAGA 342
BSNT_03812___ 343 GTGATCCCAAGTATTACGAACAGAGCGCTGGCAGGTGTTTCTCTCGTCAC 392
||||||||.||.||||||||||||||||||.|.||.||.||..|..|.||
BL02111___com 343 GTGATCCCGAGCATTACGAACAGAGCGCTGTCCGGCGTGTCATTATTGAC 392
BSNT_03812___ 393 TTTCGGCACAAGCTGCGGCGA-ATCT---GCAAAAACGAAAATCAATGA- 437
||||||...||||||| | |.|| |||||| ||||| |.|||
BL02111___com 393 TTTCGGAGAAAGCTGC----ACAGCTGAGGCAAAA--GAAAA--ATTGAC 434
BSNT_03812___ 438 -GCT----GATGCAGCATATCTC--TCATCCGCTGCAAATTGAAAGTGAC 480
||| .|.||| |.||||| || ||.||..||||.|||||.||.
BL02111___com 435 GGCTTTAGTAAGCA--AGATCTCAATC--CCTCTCGAAATCGAAAGCGAG 480
BSNT_03812___ 481 ATCACCAGGGTTGCATCAGACATCGTAAGCTGCGGCCCCGCTTTTATGAG 530
||.||.|||||.||.||||||||.||.|||||||||||.||.|||.|.||
BL02111___com 481 ATTACGAGGGTCGCCTCAGACATTGTCAGCTGCGGCCCTGCCTTTGTCAG 530
BSNT_03812___ 531 CTATCTGATTCAGCGGTTTATAGATGCAGCTGTTTCG--GAAACATCAGT 578
||||.||.|||||..||||||..|.||.|||| ||| ||||||||.||
BL02111___com 531 CTATTTGGTTCAGGAGTTTATTCAGGCGGCTG--TCGAAGAAACATCCGT 578
BSNT_03812___ 579 GTCTAAACAGGACGCGATTTTGATGTGTAAGGAAATGCTTGTCGGAATGG 628
|||.|||.|||||||.|||||.|||...||.||.|||||.|||||..|||
BL02111___com 579 GTCAAAAGAGGACGCTATTTTAATGACGAAAGAGATGCTGGTCGGTTTGG 628
BSNT_03812___ 629 GAAAACTGTTAGAAACCGAATTGTATACCCTGCCTGCATTACAGGAAAAG 678
|||..||..|.|||||.|...|.||.||.|||||.||..|.|||||||||
BL02111___com 629 GAAGGCTCCTCGAAACAGGCCTTTACACACTGCCCGCCCTGCAGGAAAAG 678
BSNT_03812___ 679 GTTTGCGTTAAAGGCGGTGTAACAGGAGAAGGCATTAAAGCGCTGGAAAG 728
|||||||||||||||||||||||.||.||.||.|||||.|||||||||||
BL02111___com 679 GTTTGCGTTAAAGGCGGTGTAACCGGTGAGGGAATTAAGGCGCTGGAAAG 728
BSNT_03812___ 729 CGGTGTGCAGGATATGTTTCACCGGGTATTTCAAAATACTCATATGAAGT 778
||||||.|||||||||||.|.||.|.|.||.|.|||.||.|||.||||||
BL02111___com 729 CGGTGTTCAGGATATGTTCCGCCAGATGTTCCGAAACACCCATTTGAAGT 778
BSNT_03812___ 779 ACGAGGAGGATATTTCCGC---AGTGAAAAAGCAGTTT--CATGTGTAG 822
|.||.||.||||| ||| |||.||.|||||.||| |.|.||.
BL02111___com 779 ATGAAGAAGATAT---CGCTCTAGTCAAGAAGCAATTTTCCGTTTGA-- 822
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