Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03125 and BL02106
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_03125___des.1.5803.seq
# -bsequence dna-align/BL02106___des.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03125___des-BL02106___des.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03125___des-BL02106___des.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03125___des
# 2: BL02106___des
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1062
# Identity: 914/1062 (86.1%)
# Similarity: 914/1062 (86.1%)
# Gaps: 6/1062 ( 0.6%)
# Score: 3951.5
#
#
#=======================================
BSNT_03125___ 1 ATGACTGAACAAACCATTGCACATAAACAAAAACAGCTGACAAAGCAAGT 50
||||||||||||||||||||.|||||||||||||||.|||||||.||.||
BL02106___des 1 ATGACTGAACAAACCATTGCCCATAAACAAAAACAGTTGACAAAACAGGT 50
BSNT_03125___ 51 CGCTGCATTTGCTCAGCCTGAAACAAAAAACAGCCTGATTCAGCTTTTAA 100
.|||||.|||||.||||||||.||.||.|||||.|||.||||||||||.|
BL02106___des 51 TGCTGCGTTTGCACAGCCTGATACCAAGAACAGTCTGCTTCAGCTTTTGA 100
BSNT_03125___ 101 ACACGTTTATCCCATTCTTCGGCCTATGGTTTCTTGCTTATCTCAGCCTC 150
|.||||||||.||.||||||||.||.|||||||||||.|||.||||||||
BL02106___des 101 ATACGTTTATTCCTTTCTTCGGACTGTGGTTTCTTGCCTATTTCAGCCTC 150
BSNT_03125___ 151 GATGTCTCCTATCTTCTTACGTTAGCATTAACGGTGATTGCCGCAGGTTT 200
.|||||||||||||.|||||.||||.|.|||||||||||||||||||.||
BL02106___des 151 AATGTCTCCTATCTCCTTACTTTAGGAATAACGGTGATTGCCGCAGGGTT 200
BSNT_03125___ 201 TCTGACAAGAATTTTTATCATCTTCCATGACTGCTGCCATCAATCTTTTT 250
|.||||.||||||||.||.||.||.||.||||||||||||..|||.||||
BL02106___des 201 TTTGACGAGAATTTTCATTATTTTTCACGACTGCTGCCATTTATCCTTTT 250
BSNT_03125___ 251 TCAAACAAAAACGCTATAACCACATTCTCGGTTTTCTGACAGGTGTCCTG 300
||||||||||||||..||||||.||||||||||||.|||||||.||.|||
BL02106___des 251 TCAAACAAAAACGCCTTAACCATATTCTCGGTTTTTTGACAGGCGTTCTG 300
BSNT_03125___ 301 ACTTTATTCCCGTATCTTCAATGGCAGCACAGCCATTCGATTCATCATGC 350
||||||||.||.||||||||||||||||||||||||||||||||||||||
BL02106___des 301 ACTTTATTTCCTTATCTTCAATGGCAGCACAGCCATTCGATTCATCATGC 350
BSNT_03125___ 351 GACTAGCAGCAATCTGGATAAACGCGGAACAGGAGACATCTGGATGTTAA 400
|||.||||||||.|||||||||||.|||||.||.|||||||||.||.|.|
BL02106___des 351 GACAAGCAGCAACCTGGATAAACGGGGAACGGGTGACATCTGGCTGCTGA 400
BSNT_03125___ 401 CAGTAAACGAATATAAAGCTGCATC-CAGACGAACAAAGCTTGCATACAG 449
|.|||||.|||||||||||.|||.| |.| ||.|||||..|.||||||||
BL02106___des 401 CGGTAAATGAATATAAAGCCGCACCTCTG-CGCACAAAAATCGCATACAG 449
BSNT_03125___ 450 ACTTTATAGAAACCCGTTTATCATGTTTATTCTCGGACCGATTTATGTTT 499
||||||.|||||.|||||||||||||||||||||||||||||||||||.|
BL02106___des 450 ACTTTACAGAAATCCGTTTATCATGTTTATTCTCGGACCGATTTATGTCT 499
BSNT_03125___ 500 TTCTGATCACGAACCGTTTTAACAAAAAAGGCGCAAGACGCAAGGAACGT 549
||||||||||.|||||.||||||||||||||.||||||||.||.||.|||
BL02106___des 500 TTCTGATCACAAACCGCTTTAACAAAAAAGGAGCAAGACGGAAAGAGCGT 549
BSNT_03125___ 550 GTAAACACATACCTTACGAATCTGGCAATTGTCGCGTTGGCTGCCGCTTG 599
||.|||||||||||.||.||.||.|||||.|..||.||||||||.|..||
BL02106___des 550 GTGAACACATACCTCACCAACCTTGCAATCGCGGCATTGGCTGCTGTCTG 599
BSNT_03125___ 600 CTGTCTGATCTTTGGCTGGCAATCGTTTTTACTGGTGCAAGGCCCGATAT 649
|||.|||||.||||||||||||||.|||||.||.||.|||||.|||||.|
BL02106___des 600 CTGCCTGATTTTTGGCTGGCAATCATTTTTGCTCGTACAAGGTCCGATCT 649
BSNT_03125___ 650 TTCTGATTTCAGGTTCAATCGGTGTTTGGCTCTTTTATGTGCAGCATACC 699
|||||||.||||||||.|||||.||||||||.||||||||.|||||.||.
BL02106___des 650 TTCTGATCTCAGGTTCGATCGGCGTTTGGCTGTTTTATGTTCAGCACACA 699
BSNT_03125___ 700 TTTGAAGATTCTTATTTTGAAGCGGATGAAAACTGGAGCTACGTTCAGGC 749
||||||||||||||||||||||||||||||||.||||||||.||||||||
BL02106___des 700 TTTGAAGATTCTTATTTTGAAGCGGATGAAAATTGGAGCTATGTTCAGGC 749
BSNT_03125___ 750 TGCTGTTGAAGGCAGTTCATTTTATAAACTCCCGAAACTGCTTCAATGGC 799
.|||||.|||||.|||||.|||||||||||||||||||||||||||||||
BL02106___des 750 CGCTGTGGAAGGAAGTTCGTTTTATAAACTCCCGAAACTGCTTCAATGGC 799
BSNT_03125___ 800 TAACAGGCAATATTGGTTACCACCACGTTCATCATTTGAGTCCAAAGGTG 849
|.|||||||||||.||.||||||||.|||||.|||.|.||||||||||||
BL02106___des 800 TTACAGGCAATATCGGGTACCACCATGTTCACCATCTCAGTCCAAAGGTG 849
BSNT_03125___ 850 CCTAACTATAAGCTTGAAGTTGCTCATGAACATCACGAACCATTAAAAAA 899
|||||||||||.||||||...||.||||||||.||||||||.||||||||
BL02106___des 850 CCTAACTATAAACTTGAAACCGCACATGAACAGCACGAACCTTTAAAAAA 899
BSNT_03125___ 900 CGTACCGACAATCACCTTAAAAACAAGCCTGCAATCACTCGCGTTCCGTC 949
|||.|||||.|||||.||.|||||||||||||||||||||||||||||.|
BL02106___des 900 CGTCCCGACCATCACTTTGAAAACAAGCCTGCAATCACTCGCGTTCCGGC 949
BSNT_03125___ 950 TTTGGGATGAAGATAACAAACAGTTTGTGTCATTTCGGGCTATAAAACAT 999
|||||||||||||.||.||.||.|||||..|.|||||||..||.|||||.
BL02106___des 950 TTTGGGATGAAGAAAAAAAGCAATTTGTAACCTTTCGGGACATGAAACAA 999
BSNT_03125___ 1000 ATACCTGT--AAGCCTTCCGCCTGATTCACCAGAAAAACAGAAGCTGCGG 1047
|.|.|| | .|.|||| ||||.||||||.|..|||||||||||||||||
BL02106___des 1000 ACATCT-TCCCATCCTT-CGCCGGATTCAACGAAAAAACAGAAGCTGCGG 1047
BSNT_03125___ 1048 AAGAATGCCTGA 1059
|||||.||||||
BL02106___des 1048 AAGAACGCCTGA 1059
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