Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03127 and BL02105
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_03127___yocF.1.5803.seq
# -bsequence dna-align/BL02105___desK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03127___yocF-BL02105___desK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03127___yocF-BL02105___desK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03127___yocF
# 2: BL02105___desK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1114
# Identity: 983/1114 (88.2%)
# Similarity: 983/1114 (88.2%)
# Gaps: 2/1114 ( 0.2%)
# Score: 4379.0
#
#
#=======================================
BSNT_03127___ 1 ATGATTAAAAATCATTTTACATTTCAAAAACTAAACGGGATTACGCCCTA 50
|||.|.|||||.||||||||||||||||||||.||||||||..||||.||
BL02105___des 1 ATGTTCAAAAAACATTTTACATTTCAAAAACTGAACGGGATCTCGCCGTA 50
BSNT_03127___ 51 TATATGGACGATATTTTTCATCCTCCCCTTCTACTTTAT-ATGGAAATCA 99
|||||||||.||||||||||||||.|||||||||||||| || |.|||||
BL02105___des 51 TATATGGACAATATTTTTCATCCTTCCCTTCTACTTTATCAT-GCAATCA 99
BSNT_03127___ 100 TCATCTACATTTGTTATTATTGTCGGCATCATTTTGACGCTTTTATTTTT 149
|||||||||.|||||||..|.|||||||||||||||||||||||||||||
BL02105___des 100 TCATCTACACTTGTTATCGTCGTCGGCATCATTTTGACGCTTTTATTTTT 149
BSNT_03127___ 150 TTCGGTATATCGATTTGCTTTTGTCTCAAAAGGCTGGACCATTTATTTGT 199
|.|||||||..||||||||||||||||||||||||||..|.|||||||||
BL02105___des 150 TGCGGTATACAGATTTGCTTTTGTCTCAAAAGGCTGGGACGTTTATTTGT 199
BSNT_03127___ 200 GGGGATTTTTATTAATTGGCATTTCAACCGCCTCCATTACCCTGTTCAGT 249
|||..|||.|.|||||.||||||||||||||.||.||||...||||||||
BL02105___des 200 GGGCGTTTATTTTAATCGGCATTTCAACCGCTTCGATTATGATGTTCAGT 249
BSNT_03127___ 250 TATATTTATTTTGCTTTTTTTATCGCGTATTTTATTGGAAACATTAAGGA 299
||||||||||||||||||||||||||.||||||||.||.||||||||..|
BL02105___des 250 TATATTTATTTTGCTTTTTTTATCGCATATTTTATAGGGAACATTAAAAA 299
BSNT_03127___ 300 ACGCGTCCCTTTTCATATTTTATATTATGTCCATTTAATAAGCGCAGCCG 349
|||.|.|||||||||||||||||||||.|||||.||||||||||||||||
BL02105___des 300 ACGGGCCCCTTTTCATATTTTATATTACGTCCACTTAATAAGCGCAGCCG 349
BSNT_03127___ 350 TCGCAGCCAATTTCAGTCTCGTATTAAAAAAGGAATTCTTTCTGACACAA 399
||||.|||||.|||||||||||.||||||||||||||.||||||||||||
BL02105___des 350 TCGCTGCCAACTTCAGTCTCGTGTTAAAAAAGGAATTTTTTCTGACACAA 399
BSNT_03127___ 400 ATTCCTTTTGTCGTCATTACCCTCATCAGCGCAATTTTATTGCCCTTTAG 449
|||||.|||||.|||||.|||||||||||.||.|||||||||||.||.||
BL02105___des 400 ATTCCCTTTGTGGTCATCACCCTCATCAGTGCGATTTTATTGCCGTTCAG 449
BSNT_03127___ 450 TATAAGAAGCCGCAAGGAGCGCGAACGGCTTGAAGAAAAGCTCGAGGATG 499
.||.|||||||||||||||||.|||||.||.|||||||||||||||.|||
BL02105___des 450 CATTAGAAGCCGCAAGGAGCGTGAACGCCTGGAAGAAAAGCTCGAGTATG 499
BSNT_03127___ 500 CAAATGAACGGATTGCAGAACTGGTAAAATTAGAAGAACGTCAGCGAATT 549
|.||||||||||||||..|..|||||||||||||||||||.|||||.|||
BL02105___des 500 CTAATGAACGGATTGCCAATTTGGTAAAATTAGAAGAACGGCAGCGGATT 549
BSNT_03127___ 550 GCCCGCGATCTCCATGATACGCTTGGGCAAAAGCTTTCTCTTATCGGTTT 599
||||||||.|||||||||||.|||||.||||||||.||||||||||||||
BL02105___des 550 GCCCGCGACCTCCATGATACACTTGGACAAAAGCTGTCTCTTATCGGTTT 599
BSNT_03127___ 600 AAAAAGCGACTTAGCAAGAAAATTGATATACAAAGATCCCGAACAAGCAG 649
||||||||||||.||.||||||||.||.||||||||||||||.|||||.|
BL02105___des 600 AAAAAGCGACTTGGCGAGAAAATTAATTTACAAAGATCCCGATCAAGCCG 649
BSNT_03127___ 650 CTCGTGAACTGAAAAGTGTTCAGCAAACAGCGCGAACTTCTTTAAATGAA 699
|.||||||||||||||.|||||||||||.|||.|||||||||||||||||
BL02105___des 650 CGCGTGAACTGAAAAGCGTTCAGCAAACTGCGAGAACTTCTTTAAATGAA 699
BSNT_03127___ 700 GTAAGAAAAATCGTTTCCTCTATGAAGGGCATACGGCTCAAGGATGAATT 749
||.|||||||||||.|||||.|||||.|||||.|||||||||||||||.|
BL02105___des 700 GTCAGAAAAATCGTATCCTCCATGAAAGGCATCCGGCTCAAGGATGAAAT 749
BSNT_03127___ 750 GATCAACATCAAACAAATTCTCGAAGCAGCTGACATTATGTTTATCTATG 799
.||.|||||||||||||||||.||||||||.|.||||..|||.|||||||
BL02105___des 750 CATAAACATCAAACAAATTCTTGAAGCAGCCGGCATTGCGTTCATCTATG 799
BSNT_03127___ 800 AAGAAGAGAAATGGCCCGAAAATATCTCATTGCTGAATGAAAACATTTTG 849
|||||||.||||.|||.|||||||||||||||||.|||||||||||.|||
BL02105___des 800 AAGAAGATAAATTGCCGGAAAATATCTCATTGCTTAATGAAAACATATTG 849
BSNT_03127___ 850 AGTATGTGCTTAAAGGAAGCTGTCACAAATGTCGTCAAACACAGCCAGGC 899
||.||||||||.||||||||||||||.|||||||||||||||||||||||
BL02105___des 850 AGCATGTGCTTGAAGGAAGCTGTCACTAATGTCGTCAAACACAGCCAGGC 899
BSNT_03127___ 900 TAAAACTTGCCGAGTTGACATTCAGCAGCTCTGGAAGGAAGTTGTGATAA 949
|||.||.|||||.||||||||.|||||||||||||||||.|||||.||.|
BL02105___des 900 TAAGACCTGCCGCGTTGACATCCAGCAGCTCTGGAAGGAGGTTGTCATTA 949
BSNT_03127___ 950 CAGTGTCTGACGATGGAACATTCAAAGGAGAAGAAAATTCCTTTTCAAAA 999
|||||.|||||||||||||.||..||||.|||||.||.|.||||||||||
BL02105___des 950 CAGTGACTGACGATGGAACGTTTCAAGGTGAAGAGAAGTGCTTTTCAAAA 999
BSNT_03127___ 1000 GGACATGGCTTACTCGGGATGAGAGAACGGCTTGAGTTTGCAAATGGAAG 1049
|||||.|||||.||.||.|||||||||||||||||.||||||||.|||||
BL02105___des 1000 GGACACGGCTTGCTTGGCATGAGAGAACGGCTTGAATTTGCAAACGGAAG 1049
BSNT_03127___ 1050 CCTTCACATCAATACCGAAAACGGAACCAAGCTTACCATGGCAATTCCTA 1099
|||.|||||..||||..|||||||.|||||||||||||||.|||||||||
BL02105___des 1050 CCTACACATTGATACAAAAAACGGCACCAAGCTTACCATGTCAATTCCTA 1099
BSNT_03127___ 1100 ATAATTCAAAATAA 1113
|.||.|||||||||
BL02105___des 1100 ACAACTCAAAATAA 1113
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