Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03127 and BL02105

See Amino acid alignment / Visit BSNT_03127 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence dna-align/BSNT_03127___yocF.1.5803.seq
#    -bsequence dna-align/BL02105___desK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03127___yocF-BL02105___desK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03127___yocF-BL02105___desK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03127___yocF
# 2: BL02105___desK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1114
# Identity:     983/1114 (88.2%)
# Similarity:   983/1114 (88.2%)
# Gaps:           2/1114 ( 0.2%)
# Score: 4379.0
# 
#
#=======================================

BSNT_03127___      1 ATGATTAAAAATCATTTTACATTTCAAAAACTAAACGGGATTACGCCCTA     50
                     |||.|.|||||.||||||||||||||||||||.||||||||..||||.||
BL02105___des      1 ATGTTCAAAAAACATTTTACATTTCAAAAACTGAACGGGATCTCGCCGTA     50

BSNT_03127___     51 TATATGGACGATATTTTTCATCCTCCCCTTCTACTTTAT-ATGGAAATCA     99
                     |||||||||.||||||||||||||.|||||||||||||| || |.|||||
BL02105___des     51 TATATGGACAATATTTTTCATCCTTCCCTTCTACTTTATCAT-GCAATCA     99

BSNT_03127___    100 TCATCTACATTTGTTATTATTGTCGGCATCATTTTGACGCTTTTATTTTT    149
                     |||||||||.|||||||..|.|||||||||||||||||||||||||||||
BL02105___des    100 TCATCTACACTTGTTATCGTCGTCGGCATCATTTTGACGCTTTTATTTTT    149

BSNT_03127___    150 TTCGGTATATCGATTTGCTTTTGTCTCAAAAGGCTGGACCATTTATTTGT    199
                     |.|||||||..||||||||||||||||||||||||||..|.|||||||||
BL02105___des    150 TGCGGTATACAGATTTGCTTTTGTCTCAAAAGGCTGGGACGTTTATTTGT    199

BSNT_03127___    200 GGGGATTTTTATTAATTGGCATTTCAACCGCCTCCATTACCCTGTTCAGT    249
                     |||..|||.|.|||||.||||||||||||||.||.||||...||||||||
BL02105___des    200 GGGCGTTTATTTTAATCGGCATTTCAACCGCTTCGATTATGATGTTCAGT    249

BSNT_03127___    250 TATATTTATTTTGCTTTTTTTATCGCGTATTTTATTGGAAACATTAAGGA    299
                     ||||||||||||||||||||||||||.||||||||.||.||||||||..|
BL02105___des    250 TATATTTATTTTGCTTTTTTTATCGCATATTTTATAGGGAACATTAAAAA    299

BSNT_03127___    300 ACGCGTCCCTTTTCATATTTTATATTATGTCCATTTAATAAGCGCAGCCG    349
                     |||.|.|||||||||||||||||||||.|||||.||||||||||||||||
BL02105___des    300 ACGGGCCCCTTTTCATATTTTATATTACGTCCACTTAATAAGCGCAGCCG    349

BSNT_03127___    350 TCGCAGCCAATTTCAGTCTCGTATTAAAAAAGGAATTCTTTCTGACACAA    399
                     ||||.|||||.|||||||||||.||||||||||||||.||||||||||||
BL02105___des    350 TCGCTGCCAACTTCAGTCTCGTGTTAAAAAAGGAATTTTTTCTGACACAA    399

BSNT_03127___    400 ATTCCTTTTGTCGTCATTACCCTCATCAGCGCAATTTTATTGCCCTTTAG    449
                     |||||.|||||.|||||.|||||||||||.||.|||||||||||.||.||
BL02105___des    400 ATTCCCTTTGTGGTCATCACCCTCATCAGTGCGATTTTATTGCCGTTCAG    449

BSNT_03127___    450 TATAAGAAGCCGCAAGGAGCGCGAACGGCTTGAAGAAAAGCTCGAGGATG    499
                     .||.|||||||||||||||||.|||||.||.|||||||||||||||.|||
BL02105___des    450 CATTAGAAGCCGCAAGGAGCGTGAACGCCTGGAAGAAAAGCTCGAGTATG    499

BSNT_03127___    500 CAAATGAACGGATTGCAGAACTGGTAAAATTAGAAGAACGTCAGCGAATT    549
                     |.||||||||||||||..|..|||||||||||||||||||.|||||.|||
BL02105___des    500 CTAATGAACGGATTGCCAATTTGGTAAAATTAGAAGAACGGCAGCGGATT    549

BSNT_03127___    550 GCCCGCGATCTCCATGATACGCTTGGGCAAAAGCTTTCTCTTATCGGTTT    599
                     ||||||||.|||||||||||.|||||.||||||||.||||||||||||||
BL02105___des    550 GCCCGCGACCTCCATGATACACTTGGACAAAAGCTGTCTCTTATCGGTTT    599

BSNT_03127___    600 AAAAAGCGACTTAGCAAGAAAATTGATATACAAAGATCCCGAACAAGCAG    649
                     ||||||||||||.||.||||||||.||.||||||||||||||.|||||.|
BL02105___des    600 AAAAAGCGACTTGGCGAGAAAATTAATTTACAAAGATCCCGATCAAGCCG    649

BSNT_03127___    650 CTCGTGAACTGAAAAGTGTTCAGCAAACAGCGCGAACTTCTTTAAATGAA    699
                     |.||||||||||||||.|||||||||||.|||.|||||||||||||||||
BL02105___des    650 CGCGTGAACTGAAAAGCGTTCAGCAAACTGCGAGAACTTCTTTAAATGAA    699

BSNT_03127___    700 GTAAGAAAAATCGTTTCCTCTATGAAGGGCATACGGCTCAAGGATGAATT    749
                     ||.|||||||||||.|||||.|||||.|||||.|||||||||||||||.|
BL02105___des    700 GTCAGAAAAATCGTATCCTCCATGAAAGGCATCCGGCTCAAGGATGAAAT    749

BSNT_03127___    750 GATCAACATCAAACAAATTCTCGAAGCAGCTGACATTATGTTTATCTATG    799
                     .||.|||||||||||||||||.||||||||.|.||||..|||.|||||||
BL02105___des    750 CATAAACATCAAACAAATTCTTGAAGCAGCCGGCATTGCGTTCATCTATG    799

BSNT_03127___    800 AAGAAGAGAAATGGCCCGAAAATATCTCATTGCTGAATGAAAACATTTTG    849
                     |||||||.||||.|||.|||||||||||||||||.|||||||||||.|||
BL02105___des    800 AAGAAGATAAATTGCCGGAAAATATCTCATTGCTTAATGAAAACATATTG    849

BSNT_03127___    850 AGTATGTGCTTAAAGGAAGCTGTCACAAATGTCGTCAAACACAGCCAGGC    899
                     ||.||||||||.||||||||||||||.|||||||||||||||||||||||
BL02105___des    850 AGCATGTGCTTGAAGGAAGCTGTCACTAATGTCGTCAAACACAGCCAGGC    899

BSNT_03127___    900 TAAAACTTGCCGAGTTGACATTCAGCAGCTCTGGAAGGAAGTTGTGATAA    949
                     |||.||.|||||.||||||||.|||||||||||||||||.|||||.||.|
BL02105___des    900 TAAGACCTGCCGCGTTGACATCCAGCAGCTCTGGAAGGAGGTTGTCATTA    949

BSNT_03127___    950 CAGTGTCTGACGATGGAACATTCAAAGGAGAAGAAAATTCCTTTTCAAAA    999
                     |||||.|||||||||||||.||..||||.|||||.||.|.||||||||||
BL02105___des    950 CAGTGACTGACGATGGAACGTTTCAAGGTGAAGAGAAGTGCTTTTCAAAA    999

BSNT_03127___   1000 GGACATGGCTTACTCGGGATGAGAGAACGGCTTGAGTTTGCAAATGGAAG   1049
                     |||||.|||||.||.||.|||||||||||||||||.||||||||.|||||
BL02105___des   1000 GGACACGGCTTGCTTGGCATGAGAGAACGGCTTGAATTTGCAAACGGAAG   1049

BSNT_03127___   1050 CCTTCACATCAATACCGAAAACGGAACCAAGCTTACCATGGCAATTCCTA   1099
                     |||.|||||..||||..|||||||.|||||||||||||||.|||||||||
BL02105___des   1050 CCTACACATTGATACAAAAAACGGCACCAAGCTTACCATGTCAATTCCTA   1099

BSNT_03127___   1100 ATAATTCAAAATAA   1113
                     |.||.|||||||||
BL02105___des   1100 ACAACTCAAAATAA   1113


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