Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03128 and BL02104
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_03128___yocG.1.5803.seq
# -bsequence dna-align/BL02104___desR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03128___yocG-BL02104___desR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03128___yocG-BL02104___desR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03128___yocG
# 2: BL02104___desR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity: 527/600 (87.8%)
# Similarity: 527/600 (87.8%)
# Gaps: 0/600 ( 0.0%)
# Score: 2343.0
#
#
#=======================================
BSNT_03128___ 1 ATGATTAGTATATTTATTGCAGAAGATCAGCAAATGCTGCTGGGCGCTTT 50
||||||||||||||||||||.|||||||||||.|||||..||||||||||
BL02104___des 1 ATGATTAGTATATTTATTGCGGAAGATCAGCAGATGCTCTTGGGCGCTTT 50
BSNT_03128___ 51 AGGATCACTTCTAAACCTCGAAGACGATATGGAAGTCGTAGGCAAAGGTA 100
||||||.|||||.|||.|.|||||.||||||||||||||.||||||||.|
BL02104___des 51 AGGATCGCTTCTGAACTTAGAAGATGATATGGAAGTCGTCGGCAAAGGCA 100
BSNT_03128___ 101 CAACCGGCCAAGATGCTGTTGATTTTGTCAAAAAACGCCAGCCTGATGTA 150
|.|||||.||||||||.||||||||....|||||||..|.|||||||.||
BL02104___des 101 CTACCGGACAAGATGCCGTTGATTTCACAAAAAAACATCGGCCTGATATA 150
BSNT_03128___ 151 TGTATTATGGACATTGAAATGCCCGGAAAAACAGGGCTTGAAGCTGCTGA 200
||.||||||||||||||||||||||||||.||.|||||||||||||||||
BL02104___des 151 TGCATTATGGACATTGAAATGCCCGGAAAGACGGGGCTTGAAGCTGCTGA 200
BSNT_03128___ 201 GGAGCTAAAAGATACAGGCTGCAAAATTATCATCTTAACCACCTTCGCCA 250
|||..||||.||||||||||||||.|||||.|||||||||||.||.|||.
BL02104___des 201 GGAATTAAAGGATACAGGCTGCAACATTATTATCTTAACCACTTTTGCCC 250
BSNT_03128___ 251 GACCCGGTTACTTTCAGAGAGCTATTAAAGCTGGTGTTAAAGGCTATTTG 300
|.|||||.||.||||||.||||.||||||||.||||||||||||||||||
BL02104___des 251 GCCCCGGCTATTTTCAGCGAGCCATTAAAGCAGGTGTTAAAGGCTATTTG 300
BSNT_03128___ 301 TTAAAAGACAGTCCGAGTGAAGAGCTGGCCAACGCCATCCGTAGCGTCAT 350
|||||.|||||.||.||.||||||||.||.|.|||||||||.||||||||
BL02104___des 301 TTAAAGGACAGCCCAAGCGAAGAGCTTGCGAGCGCCATCCGCAGCGTCAT 350
BSNT_03128___ 351 GAACGGAAAACGAATCTATGCACCTGAGCTGATGGAGGACTTATACAGCG 400
|||.|||||.||.||||||||.|||||.||||||||.|||.|.|||||.|
BL02104___des 351 GAAAGGAAAGCGGATCTATGCGCCTGAACTGATGGAAGACATGTACAGTG 400
BSNT_03128___ 401 AAGCTAACCCTCTTACAGATAGAGAAAAAGAAGTGCTTGAACTTGTGGCT 450
|.||.||.||.||.||||||||||||||||||||||||||||||||||||
BL02104___des 401 AGGCCAATCCCCTCACAGATAGAGAAAAAGAAGTGCTTGAACTTGTGGCT 450
BSNT_03128___ 451 GACGGTAAAAACACAAAAGAAATCGCTCAGGAACTCAGCATCAAAAGCGG 500
|||||.||||||||||||||||||||.||.||||||||||||||||||||
BL02104___des 451 GACGGAAAAAACACAAAAGAAATCGCCCAAGAACTCAGCATCAAAAGCGG 500
BSNT_03128___ 501 GACGGTGCGGAATTATATCTCAATGATTCTAGAAAAGCTTGAAGTGAAAA 550
.||.||.||.||||||||||||||||||||.|||||||||||.|||||||
BL02104___des 501 AACCGTACGAAATTATATCTCAATGATTCTTGAAAAGCTTGAGGTGAAAA 550
BSNT_03128___ 551 ATCGAATTGAAGCCATTACCCGGTCAAAGGAAAAAGGCTGGTTTAAATAA 600
||||.||||||||||||||.||.|||||||||||||||||||||||||||
BL02104___des 551 ATCGGATTGAAGCCATTACTCGTTCAAAGGAAAAAGGCTGGTTTAAATAA 600
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