Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03795 and BL02094
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence dna-align/BSNT_03795___hrcA.1.5803.seq
# -bsequence dna-align/BL02094___hrcA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03795___hrcA-BL02094___hrcA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03795___hrcA-BL02094___hrcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03795___hrcA
# 2: BL02094___hrcA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1051
# Identity: 773/1051 (73.5%)
# Similarity: 773/1051 (73.5%)
# Gaps: 38/1051 ( 3.6%)
# Score: 2772.0
#
#
#=======================================
BSNT_03795___ 1 ATGTTAACAAATCGTCAGCTGCTGATCCTTCAGGTTATAATCAACGATTT 50
|||||||||||||||||||||.|.|||.|.||||||||..||||||||||
BL02094___hrc 1 ATGTTAACAAATCGTCAGCTGTTAATCTTGCAGGTTATCGTCAACGATTT 50
BSNT_03795___ 51 TATTAAATCGGCACAGCCGGTGGGATCAAGAACTCTTTCGAAAAAAGATG 100
.|||...||.||.||||||||.|||||||||||.|||||.|||||.||.|
BL02094___hrc 51 CATTCGTTCAGCTCAGCCGGTAGGATCAAGAACGCTTTCCAAAAAGGAAG 100
BSNT_03795___ 101 AAATCACATTTAGCTCTGCAACAATAAGAAACGAGATGGCTGACTTGGAG 150
|.||||||||.|||||.|||||.||.||||||||.||||||||||||||.
BL02094___hrc 101 ATATCACATTCAGCTCGGCAACGATCAGAAACGAAATGGCTGACTTGGAA 150
BSNT_03795___ 151 GAATTGGGCTTTATTGAAAAAACCCATTCATCCTCAGGACGTGTTCCGTC 200
||..|.||.|||||.|||||||||||.|||||.|||||.||..||||.||
BL02094___hrc 151 GAGCTCGGTTTTATCGAAAAAACCCACTCATCTTCAGGCCGGATTCCTTC 200
BSNT_03795___ 201 AGAAAAAGGGTATCGGTACTATGTTGACCATTTGCTGTCACCCGTCAAAC 250
.|||||.||.|||||.||.|||||.||.|||.||||.|||||.|..||.|
BL02094___hrc 201 TGAAAAGGGCTATCGCTATTATGTCGATCATCTGCTTTCACCTGGAAAGC 250
BSNT_03795___ 251 TGACGAAAAGCGACCTGGACCAAATCCACTCGATCTTCAAAGAGAAAATT 300
||.|.||||..|||.|..||...||.||.|||||.||||||||.|||||.
BL02094___hrc 251 TGTCAAAAACGGACTTAAACATTATTCATTCGATTTTCAAAGAAAAAATC 300
BSNT_03795___ 301 TTCGAGCTGGAGAAGACAGTTCAAAAATCAGCGCAAATTTTGTCCGATCT 350
||.||.||.||.||..|.||.||.||.||.||.|||.|..|||||||.||
BL02094___hrc 301 TTTGAACTCGAAAAAGCCGTGCAGAAGTCGGCCCAAGTGCTGTCCGACCT 350
BSNT_03795___ 351 GACGAATTACACATCCATCGTACTCGGGCCGAAGCTGAGTGAGAATTACC 400
|||.|||||.|||||.||.||.|||||.||||..||||||||.||..|.|
BL02094___hrc 351 GACAAATTATACATCGATTGTCCTCGGTCCGAGACTGAGTGAAAACCATC 400
BSNT_03795___ 401 TTAAACAGATTCAAATCATTCCGATTCAGCCTGATATGGCGGTAGCGATT 450
|.||||||||.||.||..|.|||||||||||..|.|.|||.||.||.|||
BL02094___hrc 401 TCAAACAGATCCAGATTGTACCGATTCAGCCCAAGAAGGCCGTTGCCATT 450
BSNT_03795___ 451 CTCGTTACCAATACGGGGCATGTGGAAAACAAAACGATTAACTTTCCGAC 500
||.||.||.|||||.||.||||||||.||.|||||||||||.||.|||.|
BL02094___hrc 451 CTAGTAACGAATACCGGCCATGTGGAGAATAAAACGATTAATTTCCCGGC 500
BSNT_03795___ 501 CAAAATGGATCTGTCTGATATTGAAAAACTGGTAAATATACTGAACGACC 550
..|..|.|||||.||.|||.|.||.||.|||||.||||||.|.||.||.|
BL02094___hrc 501 GGAGGTCGATCTTTCCGATCTCGAGAAGCTGGTGAATATATTAAATGAAC 550
BSNT_03795___ 551 GTTTAAGCGGCGTTCCAATGGAT----GAACTGAATGAGCGCATATTTAA 596
|..|.||.|||||.|| ||| ||||||||.||..|.||.||.||
BL02094___hrc 551 GCCTTAGAGGCGTGCC----GATCTCAGAACTGAAAGACAGGATTTTCAA 596
BSNT_03795___ 597 AGAAGTTGTCATGTACCT-AAGACAGCACATTAAAAACTATGACAATATA 645
|||.||||||||.|.|.| |||.| |||||||.||||.||.||.|..||.
BL02094___hrc 597 AGAGGTTGTCATCTTCTTGAAGTC-GCACATTCAAAATTACGATACGATT 645
BSNT_03795___ 646 CTCGACGCGCTTCGTTCAAC-CT---TTCAT-TCCACAAATCACATTGAA 690
.|..|||||||..|..|||| || ||||| |...||||.| ||.
BL02094___hrc 646 TTGCACGCGCTCGGCGCAACGCTGGATTCATCTGTTCAAACC-----GAC 690
BSNT_03795___ 691 AAGTTGTTTTTTGGCGGGAAAATCAATATGCTGAACCAGCCTGAGTTCCA 740
..|.|||||||.|||||.||.||.||.||||||||||||||.||.||.||
BL02094___hrc 691 CGGCTGTTTTTCGGCGGCAAGATTAACATGCTGAACCAGCCCGAATTTCA 740
BSNT_03795___ 741 TGATATCACCCGAGTTCGGTCGCTGCTTTCATTAATTGAGAAAGAACAGG 790
.|||||...|.||||....|||||..|.||..|.||||||||||||||||
BL02094___hrc 741 CGATATTGACAGAGTGAAATCGCTATTGTCGCTCATTGAGAAAGAACAGG 790
BSNT_03795___ 791 ATGTTTTAAAGCTGGTTCAATC--------CCCGCGCACGGGAATTTCGA 832
|..||.|...|||..||||.|| || ||||||.|.|
BL02094___hrc 791 AGATTCTCCGGCTCTTTCAGTCGACTGAGTCC--------GGAATTACCA 832
BSNT_03795___ 833 TTAAAATCGGAAAAGAAAACGACTATGAAGAGATGGAAAATTGCAGTCTG 882
|.||||||||.|||||||||||||||||||||||||||||.|||||.|||
BL02094___hrc 833 TCAAAATCGGCAAAGAAAACGACTATGAAGAGATGGAAAACTGCAGCCTG 882
BSNT_03795___ 883 ATTACGGCTTCTTATTCCGTAGAC-CAGAAGCAGATCGGCTCAATTGCGA 931
|||||.||..|.||..|.||.|.| || ||.|||||||||||.||||||.
BL02094___hrc 883 ATTACCGCAACATACACGGTCGGCTCA-AAACAGATCGGCTCCATTGCGG 931
BSNT_03795___ 932 TTATCGGCCCGACCCGCATGAATTATTCCAGGGTTGTCAGCCTGCTTCAG 981
|.|||||.|||||.||||||.|.||.|||.|.||.|||.||.||||||||
BL02094___hrc 932 TCATCGGACCGACGCGCATGGACTACTCCCGCGTCGTCGGCTTGCTTCAG 981
BSNT_03795___ 982 CATGTGACTTCGGACTTGTCAAAAGCATTAACAAGTCTGTATGATGAATA 1031
||.||..|.||.||||||||||||||..|.||||||.|||||||||..||
BL02094___hrc 982 CACGTATCATCTGACTTGTCAAAAGCGCTGACAAGTTTGTATGATGGGTA 1031
BSNT_03795___ 1032 A 1032
|
BL02094___hrc 1032 A 1032
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