Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03800 and BL02090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence dna-align/BSNT_03800___spoIIP.1.5803.seq
# -bsequence dna-align/BL02090___spoIIP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03800___spoIIP-BL02090___spoIIP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03800___spoIIP-BL02090___spoIIP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03800___spoIIP
# 2: BL02090___spoIIP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1242
# Identity: 882/1242 (71.0%)
# Similarity: 882/1242 (71.0%)
# Gaps: 72/1242 ( 5.8%)
# Score: 2956.0
#
#
#=======================================
BSNT_03800___ 1 ATGAGAAATAAACGCAGAAACAGACAGATTGTTGTTGCGGTAAATGGAGG 50
||||||||.|.|.||||.||..|.|||.||||..|.||.|||||||||.|
BL02090___spo 1 ATGAGAAAAAGAGGCAGGAATCGTCAGTTTGTGCTGGCTGTAAATGGAAG 50
BSNT_03800___ 51 GAAAGCGGTAAAAGCCA-TCTTTCTATTTATCGTAAGCCTTATCGTGATT 99
.|..||||| .|||.|| |.||..||||||||||.|||||..|..|..||
BL02090___spo 51 AAGCGCGGT-TAAGACAGTATTCTTATTTATCGTCAGCCTGCTGCTCGTT 99
BSNT_03800___ 100 TTTGTTCTATCCGGTGTGCTGACGTCTCTCCGGCCGGAACTTAGGCCGTC 149
|||.||.||||.||.|||||.||.||.||.||.||.||..|.||||||||
BL02090___spo 100 TTTATTTTATCAGGCGTGCTCACATCGCTGCGTCCTGAGTTAAGGCCGTC 149
BSNT_03800___ 150 GTCTGACTCTTTTTATGGGATTGCTGAAGAATTGCCGG--GTGACGTATT 197
.|| .||.||.||..||.|.|||||.|||.||..|| |.|||.|.|.
BL02090___spo 150 TTC---ATCGTTGTACCGGGTGGCTGATGAACTGAAGGGCGAGACCTTTG 196
BSNT_03800___ 198 TGCACATTTGCTGCGGATGGAAAACCATTATTTCGCTTCTGA----CCTC 243
.||.||||| ||.|.|||||||||||.||.||.||.||.|| ||
BL02090___spo 197 GGCTCATTT--TGGGAATGGAAAACCACTACTTTGCATCAGAATTGCC-- 242
BSNT_03800___ 244 TCTCAAACCGA--CAGCTCATTTCATCTTT-----CTCGTCTTTCTTTAA 286
..|||||| .|||.| |||.|.|||| |||||| .|.|
BL02090___spo 243 ---GGAACCGAATAAGCGC-TTTGAGCTTTCCCCCCTCGTC-----CTGA 283
BSNT_03800___ 287 AGCTGGCGACGAGCATTAACCTCGAAGATCCGCGGAGCTTTCTCGGTCGG 336
||||||||||.||||||||..|..||||||||||.||.||||||||.|||
BL02090___spo 284 AGCTGGCGACCAGCATTAATTTGAAAGATCCGCGAAGTTTTCTCGGACGG 333
BSNT_03800___ 337 GAGCTGCCGGGGTTTGCACAATTTGATACCGAGATTTTGTTAGCTGGACA 386
|||||.|||||.||..|.||.|||||..|.||.||..|..|.||.||.||
BL02090___spo 334 GAGCTTCCGGGATTCTCTCATTTTGACTCGGAAATCCTCATTGCCGGGCA 383
BSNT_03800___ 387 AGGGACGGATTATACGAATATGCCTGCGGAATCGCCGCCGCCGTCTAAGG 436
||||||||||||||||||||||||..|.|||||.|||||||||.||.|||
BL02090___spo 384 AGGGACGGATTATACGAATATGCCGTCAGAATCTCCGCCGCCGACTGAGG 433
BSNT_03800___ 437 TGATGGAGGAAGAAAGAGAAGCGAATTTGGCAGAGATTGAA---AAACAG 483
|..|..|.||.||.||||||||||||.|.||||||.||||| ||||||
BL02090___spo 434 TCTTAAAAGAGGAGAGAGAAGCGAATCTTGCAGAGCTTGAAGGGAAACAG 483
BSNT_03800___ 484 CAAACGCAATCAGATAATGCAC----AAAAAGATCCGCCCAAACAAACAA 529
.|||.|.||.||| || ||||| ||.||..|||||.|.|
BL02090___spo 484 AAAAAGAAAACAG-------ACGGGGAAAAA---CCTCCTGAACAATCGA 523
BSNT_03800___ 530 CAGGTGATAAAAAGGTCGTGTTTATCTATCACACGCACAATACCGAATCA 579
|.||.|.....||.|||||.||||||||..|.|||||||||||.|||||.
BL02090___spo 524 CGGGCGGCCGCAAAGTCGTATTTATCTACAATACGCACAATACGGAATCG 573
BSNT_03800___ 580 TATC-TCCCTCTATTAAAAGGCGAGACCGATCCTGACATGGCGCGCCATT 628
|||| ||||| |.||||||||.|||.|.||||||||...||||...||||
BL02090___spo 574 TATCTTCCCT-TTTTAAAAGGTGAGGCAGATCCTGATCGGGCGATTCATT 622
BSNT_03800___ 629 CTAAAGCCAACGTCACGCTTGTAGGAGATATGTTCGGACAAGCGCTTGAA 678
|.|||||.||.||.||||||||..|.||||||.|||.|.|.|||.|..||
BL02090___spo 623 CGAAAGCAAATGTTACGCTTGTCAGCGATATGCTCGCAAATGCGATGAAA 672
BSNT_03800___ 679 TCCCAGGGAATCGGAGCCACAGTGAATAAAACCGATATACAGTCAAAATT 728
||.|||||..||||.||.|..|||.|||||||||||.|.|||.|.||.||
BL02090___spo 673 TCGCAGGGCGTCGGGGCGATGGTGGATAAAACCGATTTTCAGGCGAATTT 722
BSNT_03800___ 729 AAATAAAAAAGGC----CTAAACTATGCCAGGTCCTATGATGAATCAAGG 774
....||||||||| | |||||||.|.||||||||||||||||||
BL02090___spo 723 GCGGAAAAAAGGCTGGGC----CTATGCCCGTTCCTATGATGAATCAAGG 768
BSNT_03800___ 775 CCGGTTGTGAAAGACGCCCTCGCTTCA-AACAAAAATCTGCAATATATCA 823
|||||.||.|||||.||..|.|| .|| ||||||.|..||||.|||.|.|
BL02090___spo 769 CCGGTCGTCAAAGAGGCGATGGC-CCAGAACAAAGACTTGCAGTATTTTA 817
BSNT_03800___ 824 TTGACATCCACAGAGACTCACGGCGCAAAAAAGACACAACCGCAACGATT 873
|.||.||.|||||.||.||.|..||.||.||||..||||||||.||..|.
BL02090___spo 818 TCGATATTCACAGGGATTCGCAACGGAAGAAAGCGACAACCGCGACTGTC 867
BSNT_03800___ 874 AAAGGAAAAAGCTATGCCAGGGTAGCCTTTGTCGTCGGGAAAAAAAGCAA 923
|||||||||||||||||..|.||.||.|||||..||||.||.||.|||..
BL02090___spo 868 AAAGGAAAAAGCTATGCACGCGTTGCGTTTGTGCTCGGCAAGAAGAGCTC 917
BSNT_03800___ 924 AAACTTCGAAGAAAACTATAAA-ATTGCGAGTGAGCTTCATAAACTGATG 972
.||.||||||...|||| |||| .|.||.|..|||||.|||.|||.||||
BL02090___spo 918 TAATTTCGAATCGAACT-TAAAGCTGGCAAAAGAGCTGCATGAACGGATG 966
BSNT_03800___ 973 GAGAAAAAATACCCCGGACTTAGCACAGGTGTCTTTTCCAAAG--GCTCG 1020
||.||||||||.|||||..|.|||...||.||..|.||.||.| ||| |
BL02090___spo 967 GAAAAAAAATATCCCGGTTTGAGCCGCGGAGTTATATCTAAGGGAGCT-G 1015
BSNT_03800___ 1021 CCAGGCGATAATGGTGTTTACAATCAGGATTTAACCGATAGAGCGCTTTT 1070
|| ||.||||||||..|.||.|||||||||||||.|||.|||.|..|.||
BL02090___spo 1016 CC-GGGGATAATGGCATATATAATCAGGATTTAAACGAAAGATCCGTCTT 1064
BSNT_03800___ 1071 GCTCGAGTTTGGCGGAGTAGATAATAATCTCGAAGAGCTGCAGCGTGCGG 1120
..||||.||||||||.|||||||||||.|.||||||||||.||||.||.|
BL02090___spo 1065 AATCGAATTTGGCGGCGTAGATAATAACCGCGAAGAGCTGGAGCGGGCTG 1114
BSNT_03800___ 1121 CTAACGCGGCCGCGGACGTATTCAGCGAAATGTACTGGGATGCTGAAAAG 1170
|..|.|||...|||||.|||||||||||.|||||||||.||||||||||.
BL02090___spo 1115 CAGAAGCGATGGCGGATGTATTCAGCGAGATGTACTGGAATGCTGAAAAA 1164
BSNT_03800___ 1171 GTCAACGCAGCGAGCGG-GGAGAC-----GAAAAAACAATAA 1206
||..|.||||....||| |.|||| ||||||||||||.
BL02090___spo 1165 GTTGATGCAGACTCCGGTGAAGACGATAAGAAAAAACAATAG 1206
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