Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03801 and BL02089
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence dna-align/BSNT_03801___gpr.1.5803.seq
# -bsequence dna-align/BL02089___gpr.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03801___gpr-BL02089___gpr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03801___gpr-BL02089___gpr.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03801___gpr
# 2: BL02089___gpr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1128
# Identity: 815/1128 (72.3%)
# Similarity: 815/1128 (72.3%)
# Gaps: 42/1128 ( 3.7%)
# Score: 2818.0
#
#
#=======================================
BSNT_03801___ 1 AT---GAAAAAGAGTGAGCTGGATGTGAATCAGTATTTGATACGTACCGA 47
|| |||||||| ||||.|||.|.|.|||.|||....|.||.||.||
BL02089___gpr 1 ATGGAGAAAAAGA---AGCTCGATTTAAGTCAATATGCAGTCCGGACAGA 47
BSNT_03801___ 48 TTTGGCAGTGGAAACGAAGGA---AGCAATGGCCAATCAGCAGGCTGTGC 94
.||.||.||||||.|||.||| .|||..|| |..||.|.|||...|
BL02089___gpr 48 CTTAGCCGTGGAAGCGAGGGATCTGGCAGAGG---AAAAGGAAGCTTCTC 94
BSNT_03801___ 95 CGACAAAAGAAA----TTAAAGGCTTTATTGAAAAAGAGCGTGATCATGG 140
| ||||||| |.|||||.||||..|..|||||....||..|.|.
BL02089___gpr 95 C----AAAGAAAGAGCTGAAAGGGTTTACAGTCAAAGAATACGAAAAAGA 140
BSNT_03801___ 141 CGGCATTAAAATCCGCACAGTTGATGTT-ACAAAGGAAGGCGCAGAGCTT 189
|||.||.|||||.|..||..|.|||.|| |..|| |||||.||..||||.
BL02089___gpr 141 CGGGATCAAAATTCAGACGATGGATATTGATGAA-GAAGGAGCGAAGCTG 189
BSNT_03801___ 190 TCGGGAAAAAAAGAAGGGCGCTATTTAACGCTTGAAGCACAGGGAATCAG 239
|||||.|||||||..||.|||||||||||..|||||.||||.||.|||||
BL02089___gpr 190 TCGGGGAAAAAAGCCGGCCGCTATTTAACCTTTGAAACACAAGGGATCAG 239
BSNT_03801___ 240 GGAGAATGATTCGGAAATGCAGGAGAAGGTC-TCTGCTGTCTTTGCGGAG 288
..||.|.|||||.|.|.|||||||.||.||| || |.||||||.||..||
BL02089___gpr 240 ACAGCAGGATTCCGTATTGCAGGAAAAAGTCGTC-GATGTCTTCGCAAAG 288
BSNT_03801___ 289 GAATTCTCAGCTTTTCTTGAAAACCTTAAT-----ATCTCAAAAGATGCG 333
|||||.||..|.|||||.|| |||.| ||..|....|||||.
BL02089___gpr 289 GAATTTTCCTCGTTTCTCGA-----TTATTTGGGCATTCCGCGGGATGCC 333
BSNT_03801___ 334 AGCTGTTTGATCGTTGGGCTCGGCAACTGGAACGTGACACCTGATGCGCT 383
|||||.||.||.||.|||||||||||||||||.||.||.||.||..||||
BL02089___gpr 334 AGCTGCTTAATAGTCGGGCTCGGCAACTGGAATGTCACGCCCGACTCGCT 383
BSNT_03801___ 384 TGGACCGATGGCAGT---AGAAAATCTGTTGGTAACAAGGCACTTGTTTA 430
.||.||..| ||| .||.||.||..|.||.||.||||||.|||||.
BL02089___gpr 384 CGGCCCCCT---AGTGACGGAGAACCTTCTCGTGACGAGGCACCTGTTTC 430
BSNT_03801___ 431 AGCTTCAGCCGGAAAACGTACAGGAGGGTTACAGGCCTGTCAGTGCTTTT 480
||||.|||||.|||||.|||.||||.||.|||.|.||.||.|||||..||
BL02089___gpr 431 AGCTGCAGCCCGAAAATGTAGAGGAAGGCTACCGTCCGGTGAGTGCGCTT 480
BSNT_03801___ 481 GCACCGGGTGTAATGGGGATAACAGGAATCGAAACAAGTGACATTATTAA 530
.|.|||||.||.|||||..|.||.|||||.|||||.||.||||||||..|
BL02089___gpr 481 TCCCCGGGAGTCATGGGCTTGACCGGAATTGAAACGAGCGACATTATCCA 530
BSNT_03801___ 531 AGGTGTGATTGAGCAATCGAAGCCTGATTTTGTCATCGCCATTGATGCGT 580
|||.|||||.||.|..||.|||||.|||||||||||.||||||||||||.
BL02089___gpr 531 AGGGGTGATCGATCGCTCAAAGCCCGATTTTGTCATTGCCATTGATGCGC 580
BSNT_03801___ 581 TGGCGGCGCGGGCGGTGGAAAGGGTCAACACAACCATTCAAATATCGGAT 630
||||..|..|.|.|.|.||..|.||.||..|.|||||||||||.||.||.
BL02089___gpr 581 TGGCATCAAGAGGGATCGAGCGTGTGAATTCTACCATTCAAATTTCAGAC 630
BSNT_03801___ 631 ACAGGCATTCACCCGGGATCTGGAGTGGGGAATAAACGAAAAGATTTAAG 680
|..||.||.|||||.||.|||||.||||||||||||.|||||||.|||||
BL02089___gpr 631 AGCGGGATACACCCCGGGTCTGGTGTGGGGAATAAAAGAAAAGAGTTAAG 680
BSNT_03801___ 681 CAAAGACACGCTTGGTGTTCCGGTGATTGCTATCGGTGTTCCGACAGTAG 730
|||.||.|||||.||..|||||||.||.||.|||||||||||||||||.|
BL02089___gpr 681 CAAGGATACGCTCGGCATTCCGGTCATCGCCATCGGTGTTCCGACAGTGG 730
BSNT_03801___ 731 TTGATGCCGTGACAATTGCCAGCGACACGGTGGACTACATATTAAAACAT 780
|.||||||||.||.||..|.|||||||||.|.||.|||||..|.||.|||
BL02089___gpr 731 TCGATGCCGTCACGATCACGAGCGACACGATTGATTACATGCTGAAGCAT 780
BSNT_03801___ 781 TTTGGCAGAGAAATGAAGGATAACAGGCCATCAAGATCGCTTGTTCCGGC 830
|||||.|||||.||||..||..||||.||.||.||.|||||.|||||.||
BL02089___gpr 781 TTTGGAAGAGAGATGAGAGACGACAGTCCGTCCAGGTCGCTCGTTCCCGC 830
BSNT_03801___ 831 AGGCATGACGTTTGGGAAAAAGAAA-GTGCTCACTGAAGAAGATCTTCCC 879
.||.||||..|||||| |||||||| ||.|||||.||||||||.||||||
BL02089___gpr 831 GGGGATGAGCTTTGGG-AAAAGAAAGGTCCTCACCGAAGAAGACCTTCCC 879
BSNT_03801___ 880 GATCAAAAGCAGCGCCAATCGTTCCTAGGGATTGTCGGAACCCTTCAAGA 929
|||.||.||||.|||.|||||||.||.||.||.||||||..|||...|||
BL02089___gpr 880 GATGAAGAGCACCGCAAATCGTTTCTCGGTATAGTCGGAGGCCTCGCAGA 929
BSNT_03801___ 930 AGATGAAAAACGGCAGCTCATTCACGAGGTGCTTTCGCCTTTAGGGCACA 979
.|||||||||.|||||||.||.||.||.||.||..|.||..|.||.||.|
BL02089___gpr 930 GGATGAAAAAAGGCAGCTGATCCATGAAGTCCTCGCTCCGCTCGGCCATA 979
BSNT_03801___ 980 ACTTAATGGTTACACCGAAGGAAGTCGATTCATTTATCGACGATATGGCA 1029
||||||||||.||.||.||.||.||||||.||||||||||.|||||||||
BL02089___gpr 980 ACTTAATGGTGACCCCTAAAGAGGTCGATACATTTATCGATGATATGGCA 1029
BSNT_03801___ 1030 AATGTTTTAGCGAACGGATTAAACACAGCGCTTCATGAAAAAGTGTCACA 1079
|||||..|.||.|||||..|.|||||||||||.||||||||.||.||.||
BL02089___gpr 1030 AATGTGATTGCAAACGGTCTGAACACAGCGCTCCATGAAAATGTATCGCA 1079
BSNT_03801___ 1080 AGAAAACAAAGGCTCCTACAATCACTAA 1107
|||.||.|||||....||.||.||||||
BL02089___gpr 1080 AGACAATAAAGGAATGTATAACCACTAA 1107
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