Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03810 and BL02086
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence dna-align/BSNT_03810___comEB.1.5803.seq
# -bsequence dna-align/BL02086___comEB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03810___comEB-BL02086___comEB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03810___comEB-BL02086___comEB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03810___comEB
# 2: BL02086___comEB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 583
# Identity: 433/583 (74.3%)
# Similarity: 433/583 (74.3%)
# Gaps: 26/583 ( 4.5%)
# Score: 1580.0
#
#
#=======================================
BSNT_03810___ 1 GTGGAACGAATTTCATGGAATCAATACTTTATGGCTCAAAGCCATTTATT 50
||||||||.|||||.|||.|||||||.||||||||.|||||||||||..|
BL02086___com 1 GTGGAACGGATTTCTTGGGATCAATATTTTATGGCGCAAAGCCATTTGCT 50
BSNT_03810___ 51 GGCGCTGCGCAGCACATGTCCGAGATTATCTGTCGGCGCTACTATAGTCA 100
||||||.||||||||.|||.|.||..|..||||.||.||.||.||.||||
BL02086___com 51 GGCGCTTCGCAGCACGTGTACAAGGCTTGCTGTAGGAGCGACGATTGTCA 100
BSNT_03810___ 101 GAGACAAACGCATGATAGCAGGAGGCTACAATGGGTCAATCGCGGGCGGC 150
|.||.|||||.||.|||||.|||||||||||.||.||.|||||.||.|||
BL02086___com 101 GGGATAAACGAATTATAGCGGGAGGCTACAACGGATCGATCGCCGGAGGC 150
BSNT_03810___ 151 GTACATTGTGCAGATGAAGGATGCTTAATGATAGATGATCATTGCGCAAG 200
||.||.|||||.||||||||.||||..|||.|.||.|..||.|||...||
BL02086___com 151 GTTCACTGTGCGGATGAAGGCTGCTATATGGTGGACGGGCACTGCATTAG 200
BSNT_03810___ 201 AACCATTCACGCTGAAATGAATGCGATTCTTCAATGCTCTAAGTTTGGGG 250
|||.||||||||.||.|||||.|||||||||||.||..|.||.||.||.|
BL02086___com 201 AACGATTCACGCCGAGATGAACGCGATTCTTCAGTGTGCAAAATTCGGTG 250
BSNT_03810___ 251 TGCCGACTGATGGAGCCGAGATTTATGTGACGCATTATCCGTGCATTCAA 300
|.|||||.||.||.||.||.||.|||||.||.||||.|||||||||||||
BL02086___com 251 TTCCGACCGAAGGCGCTGAAATATATGTCACACATTTTCCGTGCATTCAA 300
BSNT_03810___ 301 TGCTGCAAATCTATTATTCAAGCGGGTATCAAAACGGTTTATTATGCTGA 350
|||||.|||||.||.|||||.||.|||||.||||||.|.||.|||||..|
BL02086___com 301 TGCTGTAAATCGATCATTCAGGCAGGTATTAAAACGATATACTATGCGAA 350
BSNT_03810___ 351 GGATTACAAAACACATCCATATGCGCAGGAATTATTTGAACAGGCGGGTG 400
|||||||||||..|||||.||.|||...|||.|.||.||.|||||...||
BL02086___com 351 GGATTACAAAAACCATCCTTACGCGGTTGAACTTTTCGATCAGGCTTCTG 400
BSNT_03810___ 401 TAACAGTTGAACAGGTTGAACTCGATGAAATGATCGTTGATCTGAAAAAC 450
|.|.|||.||.|||||.||.||||||||.|||||..|.||..||||||||
BL02086___com 401 TTAAAGTGGAGCAGGTAGAGCTCGATGAGATGATTATCGACTTGAAAAAC 450
BSNT_03810___ 451 AGGGAAAAGCTTTCATTTGTAGCGGGTCTTATAGGGAAA---TTGGCTGA 497
..|||||||.|..|.||||||||.|.|||.|| .||| .|||||||
BL02086___com 451 CAGGAAAAGTTGGCGTTTGTAGCCGATCTGAT---CAAACAGCTGGCTGA 497
BSNT_03810___ 498 T----GCCGGTTTAGCGGAGGAAGA----AT--TGAAAAAGATACATGAA 537
| ||| || |||||||| || .|||| |||||.|||
BL02086___com 498 TAAAGGCC---TT----GAGGAAGAGGAGATCAGGAAA---ATACACGAA 537
BSNT_03810___ 538 CAGGCGAATACACTTTTCACGAGCTACGTGTGA 570
.||||.||.|.|||.||.||.||||||||||.|
BL02086___com 538 GAGGCCAACAAACTGTTTACAAGCTACGTGTAA 570
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