Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03815 and BL02082
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_03815___yqeK.1.5803.seq
# -bsequence dna-align/BL02082.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03815___yqeK-BL02082.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03815___yqeK-BL02082.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03815___yqeK
# 2: BL02082
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity: 400/606 (66.0%)
# Similarity: 400/606 (66.0%)
# Gaps: 87/606 (14.4%)
# Score: 1276.5
#
#
#=======================================
BSNT_03815___ 1 ATGAATCGTGAGGAGGCACTT-GCATGCGTGAAGCAGCAATTGACCGAAC 49
|||||.||||||||.|| ||| ||.||||||||..|.||..||||.||||
BL02082 1 ATGAAACGTGAGGAAGC-CTTAGCCTGCGTGAAAGAACAGCTGACAGAAC 49
BSNT_03815___ 50 ACCGATATATCCATACGGTTGGCGTGATGAACACGGCGATCGAACTTGCG 99
|.||.||.|||||||||||.|||||||||.|.|||||..||.|||||||.
BL02082 50 AGCGCTACATCCATACGGTCGGCGTGATGGAGACGGCTGTCAAACTTGCT 99
BSNT_03815___ 100 GAGCGTTTTGGAGCCGATTCT-AAAAAAGCGGAAACAGCGGCAATCTTTC 148
||.||.|||||.||.|| ||| ||||||||.||||..||.||.|||||||
BL02082 100 GAACGGTTTGGCGCAGA-TCTGAAAAAAGCCGAAATCGCCGCGATCTTTC 148
BSNT_03815___ 149 ATGATTACGCCAAATTCCGCCCGAAAGAAGAAATGAAACAAATTATTGCG 198
||||.|||||||||||.|||||.|||||.||.|||||||||||.| |.|.
BL02082 149 ATGACTACGCCAAATTTCGCCCAAAAGAGGAGATGAAACAAATCA-TCCT 197
BSNT_03815___ 199 CGA----------------GAAAAAATGCCTGCGC-ATTTATTGGATCAT 231
||| ||| .|||.| |||| ||||
BL02082 198 CGACGGAGGCGGGCCGCTTGAA-------GTGCTCAATTT------TCAT 234
BSNT_03815___ 232 AATCCGGAGCTCTGGCACGCTCCGG-----TCGGCGCTTATTTGGTCCAA 276
.|| ||.||.|||||.||.|||| .|.|||||| |||.||
BL02082 235 CAT---GAACTTTGGCATGCGCCGGCAGGAGCAGCGCTT-----GTCAAA 276
BSNT_03815___ 277 AGAGAGGCAGGGGTTCAAGATGAAGACATTCTTGAC-GCCATTAGGTATC 325
|.|||||..||..||...|||||||||| ||.||.| ||||||.|||..|
BL02082 277 ACAGAGGTCGGAATTACGGATGAAGACA-TCCTGTCAGCCATTCGGTTCC 325
BSNT_03815___ 326 ATACCTCAGGGCGCCCCGGCATGACACTTTTAGAAAAAGTCATTTACGTT 375
||||.||.||..|.|||...|||||.|||.|.||||||||..||||.||.
BL02082 326 ATACATCTGGAAGGCCCAATATGACTCTTCTTGAAAAAGTGGTTTATGTA 375
BSNT_03815___ 376 GCCGATTACATTGAGCCAAATCGGGC-----ATTTCCCGGTGTCGATGAG 420
||.|||||.||.|||| ||||| .|||||.||.||.||.|||
BL02082 376 GCGGATTATATCGAGC-----CGGGCCGCCGTTTTCCGGGGGTTGAAGAG 420
BSNT_03815___ 421 GTGCGTAAGCTTGCTGAGACAGATTTGAATCAAGCGCTGATTCAGTCCAT 470
||.||.|..||.||||||..|||||||.||...|||||.||.||| .|||
BL02082 421 GTTCGGACTCTCGCTGAGGAAGATTTGGATTCGGCGCTCATCCAG-GCAT 469
BSNT_03815___ 471 T-AAAAATACAATGGTTTTTCTTATGAA----AAAAAATCAACCGGTTTT 515
| |||||||| |.||..|||.|.|| |||||||||..|.||||.
BL02082 470 TGAAAAATAC----GATTACCTTTTTAATTTCAAAAAATCAGGCCGTTTA 515
BSNT_03815___ 516 TCCAGACACATTTTTAACATATAACTGGCTTGTGTCTGGCAGCTGA---- 561
|||.||.||..|....|||||||| .|||| |.|.|...||
BL02082 516 TCCGGAAACGGTCGCCACATATAA--TGCTT-----TAGTAAACGATAGA 558
BSNT_03815___ 561 ------ 561
BL02082 559 CATTAG 564
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