Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03817 and BL02080

See Amino acid alignment / Visit BSNT_03817 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:53
# Commandline: needle
#    -asequence dna-align/BSNT_03817___yqeI.1.5803.seq
#    -bsequence dna-align/BL02080.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03817___yqeI-BL02080.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03817___yqeI-BL02080.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03817___yqeI
# 2: BL02080
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     227/293 (77.5%)
# Similarity:   227/293 (77.5%)
# Gaps:           4/293 ( 1.4%)
# Score: 847.0
# 
#
#=======================================

BSNT_03817___      1 ATGTTAACAGGTAAACAAAAACGTTTTTTGCGTTCTAAAGCGCATCATTT     50
                     |||.|||||||.|||||||||||.|.||||||.....|||||||||||.|
BL02080            1 ATGCTAACAGGAAAACAAAAACGCTATTTGCGCCGGGAAGCGCATCATCT     50

BSNT_03817___     51 AACGCCGATTTTTCAAGTAGGTAAAGGCGGAGTAAACGACAACATGATTA    100
                     ..|.||||||||||||||.||.|||||||||||.|||||.||.|||.|.|
BL02080           51 GTCACCGATTTTTCAAGTCGGCAAAGGCGGAGTCAACGAAAATATGGTCA    100

BSNT_03817___    101 AACAAAT-TGCTGAGGCGCTTGAAGCGAGAGAGCTGATTAAAGTCAGCGT    149
                     ||||||| .|| ||.||.||||||||.|||||..||||.||.||.|||||
BL02080          101 AACAAATCAGC-GAAGCTCTTGAAGCAAGAGAATTGATCAAGGTGAGCGT    149

BSNT_03817___    150 GCTTCAGAATTGCGAAGAGGATAAAAACGATGTAGCGGAAGCTCTTGTAA    199
                     |||.||.||.|||||..||..||||.|.||.|||||.|||||.||.|...
BL02080          150 GCTGCAAAACTGCGAGCAGCCTAAAGAGGAAGTAGCCGAAGCGCTGGCGG    199

BSNT_03817___    200 AAGGAAGC-CGCTCTCAATTGGTGCAGACAATCGGCAATACGATTGTGTT    248
                     ..|| ||| |||.|..||.||||||||||.|||||.||.|..||||||.|
BL02080          200 GCGG-AGCGCGCGCCGAACTGGTGCAGACGATCGGAAACATTATTGTGCT    248

BSNT_03817___    249 ATATAAGGAATCAAAGGAAAATAAACAAATCGAGCTTCCTTAA    291
                     .||||||||.|||||.|||||||||.||||.||||||||||||
BL02080          249 GTATAAGGAGTCAAAAGAAAATAAAAAAATTGAGCTTCCTTAA    291


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