Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03819 and BL02078
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_03819___yqeH.1.5803.seq
# -bsequence dna-align/BL02078___yqeH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03819___yqeH-BL02078___yqeH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03819___yqeH-BL02078___yqeH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03819___yqeH
# 2: BL02078___yqeH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1114
# Identity: 839/1114 (75.3%)
# Similarity: 839/1114 (75.3%)
# Gaps: 26/1114 ( 2.3%)
# Score: 3091.0
#
#
#=======================================
BSNT_03819___ 1 ATGGAAAAGGTTGTTTGTATCGGGTGCGGAGTTACGATCCAAACCGAGGA 50
|||||||||||.|||||||||||.||||||||..|.||.||||||||.||
BL02078___yqe 1 ATGGAAAAGGTAGTTTGTATCGGATGCGGAGTCGCCATTCAAACCGAAGA 50
BSNT_03819___ 51 CA-----AAACAGGTTTGGGGTACGCGCCGCCTGCATCGC--TTACGAAA 93
.| |||| ||||.||.|||||....||||||| ||| |||
BL02078___yqe 51 TAAAAATAAAC-----TGGGCTATGCGCCTGAAGCATCGCTGTTA--AAA 93
BSNT_03819___ 94 GAAAATGTGATTTGCCAGCGTTGCTTCAGACTGAAAAACTATAATGAAAT 143
|||.|.||.||.||||||||.|||||||||.|||||||.|||||.|||||
BL02078___yqe 94 GAAGACGTCATCTGCCAGCGCTGCTTCAGATTGAAAAATTATAACGAAAT 143
BSNT_03819___ 144 ACAAGATGTCTCCTTAACTGATGATGATTTTTTGAACATTCTTCACGGTA 193
.||||||||.||..|.||.||.|||||.||||||||.|||||.|||||.|
BL02078___yqe 144 TCAAGATGTTTCACTGACGGACGATGACTTTTTGAAGATTCTGCACGGCA 193
BSNT_03819___ 194 TTGGAGAAACGGACTCTCTTGTCGTAAAAATTGTTGATATTTTTGATTTT 243
|.||.||||||||.||.||..||||.|||||.||.||.||.||||||||.
BL02078___yqe 194 TCGGGGAAACGGATTCACTCATCGTGAAAATCGTCGACATCTTTGATTTC 243
BSNT_03819___ 244 AACGGCAGCTGGATTAATGGGCTGCAGCGCTTGGTGGGGGGAAACCCTAT 293
|||||.||||||||.||.||.|||.|.|||||.||.||.||.||.||.||
BL02078___yqe 244 AACGGAAGCTGGATCAACGGACTGAACCGCTTTGTCGGAGGTAATCCGAT 293
BSNT_03819___ 294 CTTATTAGTTGGCAATAAAGCGGATATTTTGCCTAAGTCACTGAAAAGAG 343
|||||||.|.||.||.|||||.||||||.|.|||||.|||.|.||..|.|
BL02078___yqe 294 CTTATTAATAGGAAACAAAGCAGATATTCTCCCTAAATCAGTCAAGCGCG 343
BSNT_03819___ 344 AGCGTCTGATCCAATGGATGAAGCGTGAAGCGAAAGAGCTTGGCTTAAAA 393
||||.||..|..|.|||||||||||.||.|||||||||||||||||||..
BL02078___yqe 344 AGCGCCTTGTAAACTGGATGAAGCGCGAGGCGAAAGAGCTTGGCTTAAGG 393
BSNT_03819___ 394 CCGGTTGACGTATTTTTGGTCAGTGCGGGACGCGGCCAGGGAATAAGAGA 443
||.|||||.||..|..|.|||||.||.||.|||||.|||||.||.|.|||
BL02078___yqe 394 CCTGTTGATGTGCTGCTCGTCAGCGCCGGGCGCGGGCAGGGGATGAAAGA 443
BSNT_03819___ 444 AGTAATTGACGCGATTGAGCATTACCG-CAACGGAAAAGACGTCTATGTT 492
.|..||.||||||||.||.||||||.| ||| ||.||.|||||.|||||.
BL02078___yqe 444 TGCGATCGACGCGATCGAACATTACAGACAA-GGCAAGGACGTGTATGTC 492
BSNT_03819___ 493 GTCGGATGTACAAATGTAGGAAAGTCAACCTTTATTAACCGGATTATTAA 542
|||||||||||.||.||.||.||.|||||.||.||.||||||||||||||
BL02078___yqe 493 GTCGGATGTACGAACGTCGGGAAATCAACGTTCATCAACCGGATTATTAA 542
BSNT_03819___ 543 AGAAGTGTCAGGTGAAGAAGATATTATTACAACATCCCAATTTCCTGGCA 592
|||.||.||.||.|||||.||.|||||.||.||||||||||.|||.||.|
BL02078___yqe 543 AGAGGTTTCCGGAGAAGACGACATTATCACGACATCCCAATATCCGGGGA 592
BSNT_03819___ 593 CAACCCTTGATGCGATTGAAATCCCGCTGGATGACGGTTCATCGCTTTAT 642
|.||.||||||||||||||||||||.||||||||.||.||..||.|.|||
BL02078___yqe 593 CGACGCTTGATGCGATTGAAATCCCTCTGGATGATGGATCTGCGATGTAT 642
BSNT_03819___ 643 GATACACCGGGAATTATCAACAACCATCAAATGGCGCATTATGTCAATAA 692
|||||.||||||||.||||||.|.||||||||||||||.||||||...||
BL02078___yqe 643 GATACGCCGGGAATCATCAACCATCATCAAATGGCGCACTATGTCGCGAA 692
BSNT_03819___ 693 AAAGGATCTGAAAATATTATCTCCTAAAAAGGAGCTGAAGCCTCGCACAT 742
|...||||||||||||||..|.||.||.||||||||||||||.|||||.|
BL02078___yqe 693 ACGCGATCTGAAAATATTGACGCCGAAGAAGGAGCTGAAGCCGCGCACCT 742
BSNT_03819___ 743 TCCAGCTTAATGATCAGCAAACACTGTATTTTGGCGGACTTGCAAGGTTT 792
|.|||||.||.||..|.||.||.||||.|||.||||||.|..|..|||||
BL02078___yqe 743 TTCAGCTGAACGAGGAACAGACGCTGTTTTTCGGCGGATTATCGCGGTTT 792
BSNT_03819___ 793 GATTATGTGTCTGGGGAAAGATCTCCTTTTATTTGCTATATGCCGAATGA 842
|||||||.....||.|..||.|||.|.|||.|.|||||||||||||||||
BL02078___yqe 793 GATTATGCAAGCGGAGGCAGGTCTTCGTTTGTATGCTATATGCCGAATGA 842
BSNT_03819___ 843 GCTGATGATTCATAGAACAAAACTTGAAAATGCAGACGCGCTTTATGAAA 892
.||.|.|||.|||||||||||.||||||||.||.||...|||.|||||||
BL02078___yqe 843 ACTCAAGATCCATAGAACAAAGCTTGAAAACGCGGATCAGCTGTATGAAA 892
BSNT_03819___ 893 AGCATGCAGGGGAATTGCTCACACCTCCGGGTAAAGATGAAATGGATGAG 942
||||.||.||||||.||||..|.||.||.|..|||||.||..|.||...|
BL02078___yqe 893 AGCACGCTGGGGAAATGCTTGCTCCCCCTGCAAAAGAAGATCTTGACTCG 942
BSNT_03819___ 943 TTTCCGGAATTGGTCGCCCATACGTTTACGATAAAAGA--CAAAAAGACA 990
|||||||...|.|||...||||||||||||||.||||| |.||| ||.
BL02078___yqe 943 TTTCCGGCGCTTGTCAAACATACGTTTACGATTAAAGAGCCGAAA--ACG 990
BSNT_03819___ 991 GATATCGTTTTCTCTGGGTTAGGCTGGGTTACTGTCCATGACGC---CGA 1037
||..|.||.|||||.||..|.||||||||.||.|||||.|..|| |.|
BL02078___yqe 991 GACGTTGTGTTCTCGGGCCTTGGCTGGGTAACGGTCCAGGGGGCAAACCA 1040
BSNT_03819___ 1038 TAAAAAGGTAACTGCATACGCGCCAAAAGGCGTTCATGTATTTGTTCGGC 1087
.||||..|| .||..||||.||.|||||||||||.||.|||.|.||..
BL02078___yqe 1041 AAAAATTGT---CGCCCACGCCCCTAAAGGCGTTCACGTGTTTTTGCGCA 1087
BSNT_03819___ 1088 GTTCATTAATTTAA 1101
|.||..||||.|||
BL02078___yqe 1088 GATCTCTAATATAA 1101
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