Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03822 and BL02075
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_03822___yqeF.1.5803.seq
# -bsequence dna-align/BL02075.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03822___yqeF-BL02075.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03822___yqeF-BL02075.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03822___yqeF
# 2: BL02075
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 778
# Identity: 514/778 (66.1%)
# Similarity: 514/778 (66.1%)
# Gaps: 92/778 (11.8%)
# Score: 1522.5
#
#
#=======================================
BSNT_03822___ 1 ATGAAACA----TT--------TTATCATCCTTTTC--CTTCTGCTGTTC 36
||||||.| || ||.||.| ||||| ||||||||.|
BL02075 1 ATGAAAAAAAGCTTGGTGATGGTTCTCGT--TTTTCTGCTTCTGCTTT-- 46
BSNT_03822___ 37 GTTACAGCAGGATGCGAGGGAAGGGGATAC--GAAGACGTTGTAGCATTT 84
||||.|||| |.||.|..|||.| ||| |.||.|||||||||
BL02075 47 -------CAGGCTGCG-GAGAGGACGATCCCAGAA-AAGTCGTAGCATTT 87
BSNT_03822___ 85 GGTGACAGTAATACGCGTGGCTCAAATTGGGATTATCGCGATTATCCAAA 134
||.|||||.|||||.||.||||||||||||.|.|.|||||||||||||||
BL02075 88 GGAGACAGCAATACACGCGGCTCAAATTGGCAATTTCGCGATTATCCAAA 137
BSNT_03822___ 135 AGCACAGCAGTGGGTCAATATA-TTAAAAACAG------CT--GAGCGCG 175
|||..|..|||||||||||.|| || ||| || .||.||.
BL02075 138 AGCGGAAAAGTGGGTCAATTTACTT-----CAGACTTCCCTTCAAGGGCA 182
BSNT_03822___ 176 GTA-ACCTTGATATACTCAATGCGGGAATCGGCGGACAGACGACAGAGGA 224
||| | |.|||...|||||.|||||.||||||.|.|||||.||.||
BL02075 183 GTACA-----AAATAAATAATGCAGGAATAGGCGGAGAAACGACGGAAGA 227
BSNT_03822___ 225 TGCC-CGTCTCCGATTTCA-GACAGATGTGCTGGATCAA-AAACCGAAGT 271
.||| .||.||.| |||| ||..||||||||||| ||| .|.|||...|
BL02075 228 CGCCAGGTTTCGG--TTCAGGAAGGATGTGCTGGA-CAAGCAGCCGGCAT 274
BSNT_03822___ 272 ATTTGTTTATTATGTTCGGCACCAATGACGCTGCCATACTGACTGAAGGG 321
||.|.|||||.||||||||.||.|||||.||.||.||.||.||..|||||
BL02075 275 ATCTTTTTATCATGTTCGGAACAAATGATGCAGCAATTCTTACGAAAGGG 324
BSNT_03822___ 322 AAACCGAGAGTGTCGAAGCAGCGTTTTAGAGAAAATCTGGTTTATTTTAT 371
...|||.|.||.||.||..|..|.||||.||||||.||...|||||||.|
BL02075 325 CTGCCGCGCGTATCCAAAAAAAGGTTTAAAGAAAACCTTTATTATTTTGT 374
BSNT_03822___ 372 TGAAGAAAGCAGAAAACACGGGATCAAGCCTATCTTAATGACGTGTATCC 421
|.||||||||.|....|.||||||..||||..|.|||||||||||..|.|
BL02075 375 TAAAGAAAGCCGCCGCCGCGGGATAGAGCCGGTTTTAATGACGTGCCTGC 424
BSNT_03822___ 422 CAATTATAGAAGGTAATGGGAAGCATCATCTGTTTTACTATTCCAGATAC 471
|.||..|.|||||.|..|||.| ||.|||| |||||.|||.|.||||||
BL02075 425 CGATCGTCGAAGGAAGCGGGGA-CAACATC--TTTTATTATGCAAGATAC 471
BSNT_03822___ 472 CAAGCAGCTGCTTTTGAACCAAAAGGCGGAGCAAGGAAATGGCACAACTC 521
|..||..||.|.||||||..|.|.||.|||||..|.|||||||||.|.||
BL02075 472 CGGGCTTCTTCGTTTGAAAAATACGGTGGAGCGCGTAAATGGCACGATTC 521
BSNT_03822___ 522 ATATAACGATATTACAAGAGATGTGTCGAA--GCGC-----CTGGATGTC 564
.|||||.||..|.|||||.|| || |||| ||.|||||.
BL02075 522 CTATAATGACGTCACAAGGGA-------AACGGCGCGGGAACTTGATGTT 564
BSNT_03822___ 565 CCTCTTGTAGATAACTGG--AAGCAT-TTTATAGAAGCAGACGGCGGAAA 611
||.|||.|.||.|||||| ||.||| .|.|.|.||||.|.|||
BL02075 565 CCGCTTATCGACAACTGGAAAAACATCGTGAAAAAAGCGGGCGG------ 608
BSNT_03822___ 612 AGCAACTGATGAAGCGCTTATCCAATC-TGGTTTAATAGATCCTTCTGGA 660
|||.||.|||||...|||.|||||.|| .||||| ||.||.||.||.|||
BL02075 609 AGCTACAGATGAGAAGCTGATCCATTCGAGGTTT-ATCGACCCATCGGGA 657
BSNT_03822___ 661 AATCATATGACACCTAAAGGGGCAAGGATCGTATATGAAGGAAT--ACAA 708
|||||..|.||.||.|||||.||..|.||..|.|.||||||||| ||||
BL02075 658 AATCACTTAACCCCAAAAGGCGCGCGAATTATTTTTGAAGGAATTAACAA 707
BSNT_03822___ 709 GATGGGC-AGATCCTGCA---GCGTTGA 732
.| || |.|||.|..| |..||||
BL02075 708 AA---GCAAAATCATAAAAACGTCTTGA 732
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