Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00613 and BL02046
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:14
# Commandline: needle
# -asequence dna-align/BSNT_00613___hxlB.1.5803.seq
# -bsequence dna-align/BL02046___hxlB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00613___hxlB-BL02046___hxlB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00613___hxlB-BL02046___hxlB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00613___hxlB
# 2: BL02046___hxlB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 578
# Identity: 265/578 (45.8%)
# Similarity: 265/578 (45.8%)
# Gaps: 205/578 (35.5%)
# Score: 702.0
#
#
#=======================================
BSNT_00613___ 1 ATGAAAACGACTGAATACGTAGCGGAAATTCTCAATGAGTTACACAATTC 50
BL02046___hxl 0 -------------------------------------------------- 0
BSNT_00613___ 51 AGCAGCTTATATTTCTAATGAAGAGGCTGACCAGCTTGCCGATCACATTC 100
BL02046___hxl 0 -------------------------------------------------- 0
BSNT_00613___ 101 TGTCATCCCACCAAATTTTCACCGCGGGTGCGGGTCGGTCTGGCCTGATG 150
BL02046___hxl 0 -------------------------------------------------- 0
BSNT_00613___ 151 GCAAAATCCTTCGCGATGAGACTGATGCACATGGGCTTCAACGCCCATAT 200
||||||.|.||||||.||||..||||.||...|.|
BL02046___hxl 1 ---------------ATGAGATTAATGCACCTGGGTATCAATGCATTTGT 35
BSNT_00613___ 201 AGTAGGTGAGATTCTCACTCCGCCGCTCGCCGAAGGAGATCTAG-TTATT 249
|..|||.||.|...|.||.||..|..|..|||||...|| ||.| ||||.
BL02046___hxl 36 AACAGGAGAAACCGTAACACCTGCATTTACCGAAAACGA-CTTGCTTATC 84
BSNT_00613___ 250 ATCGGCTCAGGATCAGGCGAGACAAAGAGCTTGATTCATACCGCAGCAAA 299
.|.|||.||||||||||..|.|||.|.||.|||.||||||..||.|.|||
BL02046___hxl 85 GTGGGCACAGGATCAGGGAAAACAGAAAGTTTGCTTCATATGGCGGAAAA 134
BSNT_00613___ 300 AGCAAAAAGCTTACA-CGGA---ATTGTTGCCGCTTTAACCATCAATCCG 345
.|||||| .|.| |||| |.|||.||.||..|.||.|.|..|.|.
BL02046___hxl 135 GGCAAAA----GATATCGGAGGCACTGTAGCGGCAGTTACGACCTCTTCA 180
BSNT_00613___ 346 GAAT---CAAGCGTCGGAAAACAAGCGGACCTCATCAT-CAGAATGCCTG 391
||.| |||.|| |.|||| .|||.||.||.|||.| ||| .||||.|
BL02046___hxl 181 GATTCGCCAATCG-CTGAAA--TAGCTGATCTGATCCTGCAG-CTGCCGG 226
BSNT_00613___ 392 GTTCTCCTAAAGACCCGTCAAAC----GGAAGCTATAAA---ACCATTCA 434
||||.||.||.|| |||||| ||.|| |||| ||.||.||
BL02046___hxl 227 GTTCACCCAAGGA----TCAAACGACGGGCAG---TAAACAGACTATACA 269
BSNT_00613___ 435 GCCAATGGGATCATTATTTGAACAAACTTTGCTGCTAT---TCTATGATG 481
.||.||||||||..|.||||||||.||| ||..||| |.|||||||
BL02046___hxl 270 ACCGATGGGATCGCTTTTTGAACAGACT---CTTTTATTGATTTATGATG 316
BSNT_00613___ 482 CAGTGATTTTAAAACTCATGGAGAAAAAAGGACTCGATTCTGA-AACTAT 530
|..|.||.||...|.|.|||||.|.||||||.||..||.||.| ||| ||
BL02046___hxl 317 CTATCATATTGCGAATAATGGAAATAAAAGGGCTGAATACTCATAAC-AT 365
BSNT_00613___ 531 GTTCACTCACCACGCAAACCTTGAATAG 558
||.|.|..|.||.|||||.||||||||.
BL02046___hxl 366 GTACGCAAATCATGCAAATCTTGAATAA 393
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