Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00615 and BL02045
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:14
# Commandline: needle
# -asequence dna-align/BSNT_00615___hxlA.1.5803.seq
# -bsequence dna-align/BL02045___hxlA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00615___hxlA-BL02045___hxlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00615___hxlA-BL02045___hxlA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00615___hxlA
# 2: BL02045___hxlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 646
# Identity: 469/646 (72.6%)
# Similarity: 469/646 (72.6%)
# Gaps: 26/646 ( 4.0%)
# Score: 1634.5
#
#
#=======================================
BSNT_00615___ 1 ATGGAATTACAGCTTGCATTAGACCTCGTCAACATCCCGGAAGCCATTGA 50
.|||||||||||.|.||||||||..|.|||||.||.||||||||.||..|
BL02045___hxl 1 GTGGAATTACAGTTAGCATTAGATTTAGTCAATATACCGGAAGCAATCAA 50
BSNT_00615___ 51 GCTCGTCAAAGAGGTAGAACAATACATCGACGTAGTTGAAATCGGAACAC 100
..|.||.|||||.||||||.|||||||.|||.|.||.||||||||.||.|
BL02045___hxl 51 AGTGGTAAAAGAAGTAGAAGAATACATTGACATTGTAGAAATCGGTACGC 100
BSNT_00615___ 101 CGGTCGTCATCAATGAAGGCCTAAGAGCCGTTAAAGAAATAAAAGAAGCA 150
||||.||.||.|||||||||||..|.||.||.|||||.||.|||||.||
BL02045___hxl 101 CGGTTGTGATAAATGAAGGCCTTCGTGCAGTAAAAGAGATGAAAGATGC- 149
BSNT_00615___ 151 TTTCCTCAA-TTGAAGGTTCTTGCAGACCTGAAAATCATGGATGCCGGAG 199
|||||..|| |||||.||.||.||||||||.|||||.||||||||.|..|
BL02045___hxl 150 TTTCCCGAATTTGAAAGTGCTGGCAGACCTTAAAATTATGGATGCGGCCG 199
BSNT_00615___ 200 GCTACGAAATTATGAAAGCGTCGGAAGCAGGCGCTGACATCATCATCGTT 249
|.||.|||.|.||||||||.||.||||||||.||.||.|||||||.|.||
BL02045___hxl 200 GGTATGAAGTAATGAAAGCCTCAGAAGCAGGAGCCGATATCATCACCATT 249
BSNT_00615___ 250 TTAGGGGCTACAGACGATGCAACGATTAAAGGCGCAGTAGAAGAAGCCAA 299
|||||.||..|.||.|||....|.|||||||||||.||||||||.|| |
BL02045___hxl 250 TTAGGAGCCGCTGAAGATATGTCTATTAAAGGCGCTGTAGAAGAGGC--A 297
BSNT_00615___ 300 AAAACAAAAG--AAGAAAATCTTAGTGGACATGATT--AACGTGAAGGAT 345
|||.|..||| ||.||||||.|.|||||.|||||| || |.|||||.
BL02045___hxl 298 AAAGCTCAAGGAAAAAAAATCCTGGTGGATATGATTGGAA--TTAAGGAC 345
BSNT_00615___ 346 ATCGAATCCCGTGCGAAAGAAATTGACGCACTCGGTGTTGACTACATCTG 395
||||||||.||.||....||..|.||.|.|||.|||||.||.||.||.||
BL02045___hxl 346 ATCGAATCACGCGCTGCCGAGTTGGATGTACTTGGTGTGGATTATATTTG 395
BSNT_00615___ 396 CGTCCACACTGGCTATGATCTTCAAGCAGAGGGCAAAAACTCTTTCGAAG 445
.||.||.||.||.||||||||||||||....|||.||||.||.||.|.||
BL02045___hxl 396 TGTGCATACGGGTTATGATCTTCAAGCCATTGGCCAAAATTCATTTGCAG 445
BSNT_00615___ 446 AATTAACGACAATCAAAAATACCGTAAAAAACGCAAAAACCGCAATCGCG 495
|.||||.|||.||.||.|||...|||||||||||.|||||.||.||.||.
BL02045___hxl 446 ACTTAATGACCATTAAGAATGTAGTAAAAAACGCTAAAACGGCTATTGCA 495
BSNT_00615___ 496 GGCGGCATCAAACTTGATACACTGCCAGAAGT-GATCAAGCAAAACCC-- 542
|||||.||.|||.|.||.|||.||||.||||| |.|.||..|||.|||
BL02045___hxl 496 GGCGGAATTAAATTGGACACATTGCCCGAAGTCGTTAAATTAAAGCCCGA 545
BSNT_00615___ 543 --TGACCTTGTCATTGTTGGGGGCGGAATTACAAGCGCAGCTGATAAGGC 590
||| |.||||||||||||||.|||.|||....||.||||||.||
BL02045___hxl 546 TTTGA-----TTATTGTTGGGGGCGGTATTGCAAATCAAGATGATAAAGC 590
BSNT_00615___ 591 GGAAACAGCTTCAAAAATGAAGCAGCTGATTGTCCAAGGATAA--- 633
.|...||||..||||||||||||||.||| ||||...||.|
BL02045___hxl 591 TGCGGCAGCCGCAAAAATGAAGCAGATGA---TCCAGCAATCATGA 633
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