Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03994 and BL02041
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence dna-align/BSNT_03994.1.5803.seq
# -bsequence dna-align/BL02041___cymR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03994-BL02041___cymR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03994-BL02041___cymR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03994
# 2: BL02041___cymR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity: 323/423 (76.4%)
# Similarity: 323/423 (76.4%)
# Gaps: 9/423 ( 2.1%)
# Score: 1200.5
#
#
#=======================================
BSNT_03994 1 ATGTTGAAAATATCAACTAAGGGAAGATACGGGCTCACCATTATGATCGA 50
|||||||||||||||||.||.|||||||||||.||.||||||||.||
BL02041___cym 1 ---TTGAAAATATCAACTAAAGGCAGATACGGGCTGACGATTATGATTGA 47
BSNT_03994 51 GCTTGCAAAAAAGCACGGTGAAGGCCCGACTTCATTAAAAAGCATCGCAC 100
||||||.||||||||.||.||||||||||||||.||.|||||.||.||.|
BL02041___cym 48 GCTTGCGAAAAAGCATGGGGAAGGCCCGACTTCTTTGAAAAGTATTGCTC 97
BSNT_03994 101 AGACGAATAATTTGTCCGAGCATTATTTGGAGCAGCTGGTATCGCCGCTC 150
||||.||..||||.||.||.|||||||||||.|||||.||.||.||..|.
BL02041___cym 98 AGACAAACGATTTATCGGAACATTATTTGGAACAGCTTGTTTCACCTTTG 147
BSNT_03994 151 AGAAATGCCGGTTTAGTGAAAAGCATCAGAGGCGCATATGGCGG--ATAT 198
.|.||.|||||..|.|||||||||||..|.||.||.||.||||| |.||
BL02041___cym 148 CGGAACGCCGGGCTTGTGAAAAGCATTCGCGGGGCCTACGGCGGCTACAT 197
BSNT_03994 199 GTATTAGGCAGTGAGCCGGATGCCATTACCGCGGGAGATATTATCCGTGT 248
|.||.|..|| |||||.|..||.|||||.|||||.|||||.||.||.||
BL02041___cym 198 -TCTTGGTGAG-GAGCCTGCGGCGATTACGGCGGGCGATATCATTCGCGT 245
BSNT_03994 249 GCTTGAGGGGCCGATCAGCCCTGTTGAAGTGCTGGAAGATGAGGAGCCTG 298
.||.||.||||||||||||||.||.||||||||.|||.||||||||||.|
BL02041___cym 246 CCTGGAAGGGCCGATCAGCCCGGTGGAAGTGCTTGAAAATGAGGAGCCGG 295
BSNT_03994 299 CCAAGCGTGAGCTCTGGATTCGCATCCGGGATGCTGTAAAAGAGGTTTTA 348
|.|||||.||.||.|||||....||.||.||||||||.||.||.||..|.
BL02041___cym 296 CAAAGCGCGAACTGTGGATCAAGATTCGCGATGCTGTCAAGGAAGTGCTG 345
BSNT_03994 349 GACAGTACAACATTAGAGGATCTT-GCCAGCTATACAGACGGAGAGCAAG 397
|||...||.||..|.||.|| ||| ||||||||||||||.||.|||||.|
BL02041___cym 346 GACTCCACGACGCTTGAAGA-CTTGGCCAGCTATACAGAGGGCGAGCAGG 394
BSNT_03994 398 AAGCTTATATGTTCTATATTTAG 420
||||.||||||||.||.|||||.
BL02041___cym 395 AAGCGTATATGTTTTACATTTAA 417
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