Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03994 and BL02041

See Amino acid alignment / Visit BSNT_03994 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence dna-align/BSNT_03994.1.5803.seq
#    -bsequence dna-align/BL02041___cymR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03994-BL02041___cymR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03994-BL02041___cymR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03994
# 2: BL02041___cymR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity:     323/423 (76.4%)
# Similarity:   323/423 (76.4%)
# Gaps:           9/423 ( 2.1%)
# Score: 1200.5
# 
#
#=======================================

BSNT_03994         1 ATGTTGAAAATATCAACTAAGGGAAGATACGGGCTCACCATTATGATCGA     50
                        |||||||||||||||||.||.|||||||||||.||.||||||||.||
BL02041___cym      1 ---TTGAAAATATCAACTAAAGGCAGATACGGGCTGACGATTATGATTGA     47

BSNT_03994        51 GCTTGCAAAAAAGCACGGTGAAGGCCCGACTTCATTAAAAAGCATCGCAC    100
                     ||||||.||||||||.||.||||||||||||||.||.|||||.||.||.|
BL02041___cym     48 GCTTGCGAAAAAGCATGGGGAAGGCCCGACTTCTTTGAAAAGTATTGCTC     97

BSNT_03994       101 AGACGAATAATTTGTCCGAGCATTATTTGGAGCAGCTGGTATCGCCGCTC    150
                     ||||.||..||||.||.||.|||||||||||.|||||.||.||.||..|.
BL02041___cym     98 AGACAAACGATTTATCGGAACATTATTTGGAACAGCTTGTTTCACCTTTG    147

BSNT_03994       151 AGAAATGCCGGTTTAGTGAAAAGCATCAGAGGCGCATATGGCGG--ATAT    198
                     .|.||.|||||..|.|||||||||||..|.||.||.||.|||||  |.||
BL02041___cym    148 CGGAACGCCGGGCTTGTGAAAAGCATTCGCGGGGCCTACGGCGGCTACAT    197

BSNT_03994       199 GTATTAGGCAGTGAGCCGGATGCCATTACCGCGGGAGATATTATCCGTGT    248
                      |.||.|..|| |||||.|..||.|||||.|||||.|||||.||.||.||
BL02041___cym    198 -TCTTGGTGAG-GAGCCTGCGGCGATTACGGCGGGCGATATCATTCGCGT    245

BSNT_03994       249 GCTTGAGGGGCCGATCAGCCCTGTTGAAGTGCTGGAAGATGAGGAGCCTG    298
                     .||.||.||||||||||||||.||.||||||||.|||.||||||||||.|
BL02041___cym    246 CCTGGAAGGGCCGATCAGCCCGGTGGAAGTGCTTGAAAATGAGGAGCCGG    295

BSNT_03994       299 CCAAGCGTGAGCTCTGGATTCGCATCCGGGATGCTGTAAAAGAGGTTTTA    348
                     |.|||||.||.||.|||||....||.||.||||||||.||.||.||..|.
BL02041___cym    296 CAAAGCGCGAACTGTGGATCAAGATTCGCGATGCTGTCAAGGAAGTGCTG    345

BSNT_03994       349 GACAGTACAACATTAGAGGATCTT-GCCAGCTATACAGACGGAGAGCAAG    397
                     |||...||.||..|.||.|| ||| ||||||||||||||.||.|||||.|
BL02041___cym    346 GACTCCACGACGCTTGAAGA-CTTGGCCAGCTATACAGAGGGCGAGCAGG    394

BSNT_03994       398 AAGCTTATATGTTCTATATTTAG    420
                     ||||.||||||||.||.|||||.
BL02041___cym    395 AAGCGTATATGTTTTACATTTAA    417


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