Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03992 and BL02039
See
Amino acid alignment /
Visit
BSNT_03992 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence dna-align/BSNT_03992___trmU.1.5803.seq
# -bsequence dna-align/BL02039___mnmA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03992___trmU-BL02039___mnmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03992___trmU-BL02039___mnmA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03992___trmU
# 2: BL02039___mnmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1138
# Identity: 899/1138 (79.0%)
# Similarity: 899/1138 (79.0%)
# Gaps: 41/1138 ( 3.6%)
# Score: 3568.5
#
#
#=======================================
BSNT_03992___ 1 ATGGAAAAACGGCCGGAGGATACAAGAGTCGTCGTCGGCATGTCCGGCGG 50
||||..||.|||||.||.||||||.|.||.||||||||.||||||||.||
BL02039___mnm 1 ATGGCGAAGCGGCCTGAAGATACACGGGTGGTCGTCGGAATGTCCGGAGG 50
BSNT_03992___ 51 AGTAGACTCATCTGTGGCGGCCCTGCTGTTAAAAGAACAGGGCTATGATG 100
.||.||.||.|||||||||||..||||.||.|||||.|||||||||||||
BL02039___mnm 51 CGTTGATTCCTCTGTGGCGGCTTTGCTTTTGAAAGAGCAGGGCTATGATG 100
BSNT_03992___ 101 TAATCGGAATCTTTATGAAAAACTGGGATGATACGGACGAAAACGGTTTT 150
|.||||||||.||||||||||||||||||||.||.||.||.|||||||||
BL02039___mnm 101 TCATCGGAATTTTTATGAAAAACTGGGATGACACAGATGAGAACGGTTTT 150
BSNT_03992___ 151 TGCACGGCGACAGAGGATTATGAAGATGTGATCCGCGTCTGCAACCAAAT 200
|||||.|||||.||.|||||.||||||||.||....||.||.||.|||||
BL02039___mnm 151 TGCACAGCGACGGAAGATTACGAAGATGTCATAAAGGTATGTAATCAAAT 200
BSNT_03992___ 201 CGGAATTCCGTATTATGCCGTAAACTTTGAAAAGCAATATTATGAGAAGG 250
|||.||.|||||||||||.||.||.|||||||||||.||||..||.||||
BL02039___mnm 201 CGGCATACCGTATTATGCGGTGAATTTTGAAAAGCAGTATTGGGAAAAGG 250
BSNT_03992___ 251 TATTTCAATACTTCCTTGATGAATATAAAGCAGGCAGAACACCAAACCCG 300
|.||||||||.||||||||||||||||||||.||||||||.||.||.||.
BL02039___mnm 251 TTTTTCAATATTTCCTTGATGAATATAAAGCGGGCAGAACGCCGAATCCA 300
BSNT_03992___ 301 GATGTATTGTGCAACAAAGAAATTAAATTCAAGGCCTTTTTGGAGCATGC 350
|||||..|||||||.|||||||||||||||||.|||||||||||||||||
BL02039___mnm 301 GATGTCATGTGCAATAAAGAAATTAAATTCAAAGCCTTTTTGGAGCATGC 350
BSNT_03992___ 351 ATTGTCACTTGGCGCCGACTATTTAGCGACTGGCCACTATGCAAGAGTAG 400
.|||||.|||||.|||||.|||||.||.||.|||||||||||..|.||.|
BL02039___mnm 351 TTTGTCGCTTGGAGCCGATTATTTGGCCACCGGCCACTATGCGCGGGTCG 400
BSNT_03992___ 401 ACAGAAGC-----GGCGAAAAAGTCAGAATGCTGCGCGGCATTGATGAAA 445
||.|.| | |||| .||.|.||||||..|.||..|||||||||
BL02039___mnm 401 ACCGTA-CGGACGGGCG----TGTTAAAATGCTCAGAGGGCTTGATGAAA 445
BSNT_03992___ 446 ACAAGGATCAAACGTACTTCTTGAATCAGCTGACAGAAGATACGCTGAGC 495
|.||.||||||||.||.||..|.||.||||||||||||||....||||||
BL02039___mnm 446 ATAAAGATCAAACCTATTTTCTAAACCAGCTGACAGAAGAGCAACTGAGC 495
BSNT_03992___ 496 AAAGTCATGTTCCCGATCGGCGAACTTCAAAAAAGCCGTGTGCGTGAAAT 545
|||||..||||.||||||||..|.||||||||||||||.||..|.|||||
BL02039___mnm 496 AAAGTGCTGTTTCCGATCGGGCAGCTTCAAAAAAGCCGCGTCAGGGAAAT 545
BSNT_03992___ 546 CGCCAAAGAAGCAGAACTTGCAACGGCGACGAAAAAAGACAGTACAGGCA 595
.||.||||||||.|..|||||.||.||..|.|||||||||||.|||||||
BL02039___mnm 546 TGCAAAAGAAGCGGGGCTTGCGACAGCTGCCAAAAAAGACAGCACAGGCA 595
BSNT_03992___ 596 TCTGCTTTATCGGCGAACGCAACTTCAAAACGTTTCTCAGCCAATATCTC 645
|||||||||||||.|||||.||.||||||||||||||||||||.||.||.
BL02039___mnm 596 TCTGCTTTATCGGGGAACGGAATTTCAAAACGTTTCTCAGCCAGTACCTT 645
BSNT_03992___ 646 CCTGCACAGCCGGGCGATATGATGACGATGGACGGCGAAGTAAAAGGCCG 695
||.|||||||||||.||||||..|||||||||.||||||.|.||||||||
BL02039___mnm 646 CCAGCACAGCCGGGAGATATGCGGACGATGGAAGGCGAATTTAAAGGCCG 695
BSNT_03992___ 696 CCACGACGGGTTGATGTACTATACGATCGGACAGCGTCACGGCCTTGGCA 745
|||||||||.||.||||||||||||||.|||||..|.||||||||.||||
BL02039___mnm 696 CCACGACGGTTTAATGTACTATACGATTGGACAAAGGCACGGCCTCGGCA 745
BSNT_03992___ 746 TCGGCGGAAGCGGCGAGCCGTGGTTTGCGGTAGGGAAAGATCTTGAAAAG 795
|||||||||||||.|||||||||||.|..||.||.|||||.||||||||.
BL02039___mnm 746 TCGGCGGAAGCGGAGAGCCGTGGTTCGTCGTCGGAAAAGACCTTGAAAAA 795
BSNT_03992___ 796 AACATCCTCTACGTAGATCAAGGGTTCCATAACCCTCTTTTATATTCCGA 845
||||||.|.||.|||||||||||.|||.|.||.||.||..|.|..|||||
BL02039___mnm 796 AACATCTTGTATGTAGATCAAGGTTTCGACAATCCGCTGCTTTTCTCCGA 845
BSNT_03992___ 846 CAAAATCACAGCAACAAATATCAGCT----------GGGTACG--TTCGG 883
.||.||.||.||.|||||..|.|||| ||| || |||||
BL02039___mnm 846 TAAGATTACGGCGACAAACGTAAGCTTTGTGCATAAGGG--CGTCTTCGG 893
BSNT_03992___ 884 ATATCATGAAGGGCGAA---GAGATTTCCTGCACGGCTAAATTCCGTTAC 930
.|||||| |||.|..||||||||||.||||||||.|||
BL02039___mnm 894 ----------CGGCGAAGAGGAGCTCGCCTGCACGGCCAAATTCCGCTAC 933
BSNT_03992___ 931 CGCCAAGAGGATCATAAAGTAACAGTGCGCATGACTGGCGAAGG-TGAAG 979
|||||||..||||||.||||.||.||..|.|||||.|| ||.|| |||||
BL02039___mnm 934 CGCCAAGCCGATCATGAAGTCACTGTCAGAATGACCGG-GACGGATGAAG 982
BSNT_03992___ 980 CGGAAGTCATCTTTGATGAACAAGTCCGCGCTGTAACGCCGGGACAAGCC 1029
||||.|||.|||||.|.||.|..||||||||.||.||||||||||||||.
BL02039___mnm 983 CGGAGGTCGTCTTTAAAGAGCCGGTCCGCGCCGTGACGCCGGGACAAGCG 1032
BSNT_03992___ 1030 GTTGTCTTCTATGACGGCGAAGAATGCCTTGGCGGCGGGACAATTGATGA 1079
||||||||.||..|.||||||||||||||.||||||||.||.||||||||
BL02039___mnm 1033 GTTGTCTTTTACAAAGGCGAAGAATGCCTCGGCGGCGGAACGATTGATGA 1082
BSNT_03992___ 1080 TGTGTACAAAGACGGAACAA-AATTGTGGTACGTATAA 1116
|||||..|||||||| |||| ||.|.|||||.||||||
BL02039___mnm 1083 TGTGTTTAAAGACGG-ACAACAACTTTGGTATGTATAA 1119
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.