Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03987 and BL02035

See Amino acid alignment / Visit BSNT_03987 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence dna-align/BSNT_03987.1.5803.seq
#    -bsequence dna-align/BL02035.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03987-BL02035.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03987-BL02035.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03987
# 2: BL02035
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity:     149/192 (77.6%)
# Similarity:   149/192 (77.6%)
# Gaps:           0/192 ( 0.0%)
# Score: 573.0
# 
#
#=======================================

BSNT_03987         1 ATGCTTATATGCCCGAATTGCAAAAGTAAGGATATCGGCAAAATCGGCGT     50
                     |||||..|.|||||||||||||||||.||..|.||||||||||||||.||
BL02035            1 ATGCTCGTTTGCCCGAATTGCAAAAGCAAAAACATCGGCAAAATCGGTGT     50

BSNT_03987        51 GAACCAATATTATTGTTGGGGCTGTTTTATTGAACTGACAGTGGCGAAAG    100
                     .||.||||||||.||.|||||.||.||||||||.|||||..|..|.||||
BL02035           51 AAATCAATATTACTGCTGGGGATGCTTTATTGAGCTGACCCTATCAAAAG    100

BSNT_03987       101 GGAAGATTGCAACTCATCAGGTGGAAGAAGACGGAACGTTAAGCAGCTTG    150
                     |.||.|||.|.||.|||||.||.|||||.||||||||.||.||||||.||
BL02035          101 GAAAAATTTCGACCCATCAAGTCGAAGAGGACGGAACATTGAGCAGCCTG    150

BSNT_03987       151 GATGATTTGTTTTCTGAGGATGAACGCAGCATCAATTTTTAA    192
                     ||.|||.|||||.|.||.||.|||||.|..|||||..|||.|
BL02035          151 GACGATCTGTTTACAGATGACGAACGAACGATCAACCTTTGA    192


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.