Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03976 and BL02032
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_03976___yrzL.1.5803.seq
# -bsequence dna-align/BL02032___yrzL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03976___yrzL-BL02032___yrzL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03976___yrzL-BL02032___yrzL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03976___yrzL
# 2: BL02032___yrzL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity: 226/269 (84.0%)
# Similarity: 226/269 (84.0%)
# Gaps: 4/269 ( 1.5%)
# Score: 953.0
#
#
#=======================================
BSNT_03976___ 1 GTGAGCTCGTTTGATAAAACGATGAAATTTAATTTCTCCGATGATTC--T 48
||||||||.||||||||.|||||||||||.||.||.|||||.||||| |
BL02032___yrz 1 GTGAGCTCATTTGATAAGACGATGAAATTCAACTTTTCCGACGATTCGAT 50
BSNT_03976___ 49 GCTGAGACTAACGTAAATGAGGTGCTGATTACAGTGTATGACGCGCTTCA 98
| ||.||.||.||||||||.||||||||.||.||..|||||||||||||
BL02032___yrz 51 G--GAAACCAATGTAAATGAAGTGCTGATAACCGTCCATGACGCGCTTCA 98
BSNT_03976___ 99 GGAAAAGGGCTACAATCCAATCAACCAAATTGTCGGGTACTTGCTGTCAG 148
||||||.||||||||.||.|||||||||||||||||.||..|||||||||
BL02032___yrz 99 GGAAAAAGGCTACAACCCGATCAACCAAATTGTCGGATATCTGCTGTCAG 148
BSNT_03976___ 149 GTGATCCCGCTTATATTCCTAGGCATCGTGACGCTCGCAATTTAATTCGC 198
|.|||||||||||.|||||.||||||||.||.||.|||||..|.|||||.
BL02032___yrz 149 GAGATCCCGCTTACATTCCAAGGCATCGAGATGCACGCAACCTGATTCGG 198
BSNT_03976___ 199 AAACTTGAAAGAGACGAATTAATCGAGGAATTGGTAAAGTCTTATTTAGA 248
|||.|.|||||||||||..|||||||.||||||||.||.||.||.|||||
BL02032___yrz 199 AAAATAGAAAGAGACGAGATAATCGAAGAATTGGTTAAATCGTACTTAGA 248
BSNT_03976___ 249 ACAGCATAAAGAGGCGTAA 267
|||||||||||||||||||
BL02032___yrz 249 ACAGCATAAAGAGGCGTAA 267
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