Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03975 and BL02031
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_03975___yrrK.1.5803.seq
# -bsequence dna-align/BL02031___yrrK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03975___yrrK-BL02031___yrrK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03975___yrrK-BL02031___yrrK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03975___yrrK
# 2: BL02031___yrrK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 421
# Identity: 328/421 (77.9%)
# Similarity: 328/421 (77.9%)
# Gaps: 5/421 ( 1.2%)
# Score: 1268.0
#
#
#=======================================
BSNT_03975___ 1 ATGAGAATATTAGGGCTCGATTTAGGAACCAAAACACTCGGTGTTGCTCT 50
|||.||||||||||.||.||||||||..|.|||||.|||||.||.||.||
BL02031___yrr 1 ATGCGAATATTAGGTCTGGATTTAGGTTCGAAAACGCTCGGCGTAGCGCT 50
BSNT_03975___ 51 GAGCGATGAAATGGGCTGGACTGCTCAAGGCATTGAGACCATAAAGATAA 100
|||||||||||||||||||||.||||||||.||.||.||.||.||.||..
BL02031___yrr 51 GAGCGATGAAATGGGCTGGACGGCTCAAGGGATAGAAACGATTAAAATCG 100
BSNT_03975___ 101 ATGAAGCAGAGGGCGATTATGGTTTATCCCGTTTATCTGAACTGATAAAG 150
|.||.||.|..||.||.||.||.||...|||..|..|.|||.|||..||.
BL02031___yrr 101 ACGAGGCGGGCGGTGACTACGGCTTGAACCGCCTTGCCGAATTGACGAAA 150
BSNT_03975___ 151 GACTATACTATAGATAAAATCGTGCTCGGCTTTCCTAAGAACATGAACGG 200
||||||...|||||.||.||.||.|||||.|||||.||.|||||||||||
BL02031___yrr 151 GACTATGTAATAGACAAGATTGTACTCGGTTTTCCCAAAAACATGAACGG 200
BSNT_03975___ 201 AACAGTCGGCCCAAGAGGCGAAGCCAGCCAAACATTTGCGAAAGTGCTTG 250
|||.||||||||.||.||.|||||.|||||.|..||.|||.|||||||||
BL02031___yrr 201 AACCGTCGGCCCGAGGGGGGAAGCGAGCCAGAAGTTCGCGGAAGTGCTTG 250
BSNT_03975___ 251 AAACAACG-TACAATGTTCCTGTTGTGCTGTGGGACGAGCGTCTTACCAC 299
||..|||| |.||| |||||.||.|||||.|||||||||||.||..|.||
BL02031___yrr 251 AAGAAACGTTTCAA-GTTCCCGTCGTGCTTTGGGACGAGCGCCTCTCGAC 299
BSNT_03975___ 300 AATGGCGGCTGAAAAAATGCTGATTGCAGCTGACGTCAGCAGGCAAAAAC 349
|||||||||.||||.||||||||||.||||.||.||.|||||||||||..
BL02031___yrr 300 AATGGCGGCCGAAAGAATGCTGATTTCAGCAGATGTAAGCAGGCAAAAGA 349
BSNT_03975___ 350 GAAAAAAAGTCATTGATAAAATGGCGGCTGTTATGATTTTACAAGGATAT 399
||||||||||.|||||||||||||||||.||.|||||..|.|||||||||
BL02031___yrr 350 GAAAAAAAGTAATTGATAAAATGGCGGCCGTGATGATCCTTCAAGGATAT 399
BSNT_03975___ 400 CTTGACAGCTTAAATTAA--- 417
||.||||||.||||.|.|
BL02031___yrr 400 CTCGACAGCCTAAACTCATGA 420
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