Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03969 and BL02026
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_03969___yrrO.1.5803.seq
# -bsequence dna-align/BL02026___yrrO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03969___yrrO-BL02026___yrrO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03969___yrrO-BL02026___yrrO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03969___yrrO
# 2: BL02026___yrrO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1286
# Identity: 1039/1286 (80.8%)
# Similarity: 1039/1286 (80.8%)
# Gaps: 34/1286 ( 2.6%)
# Score: 4174.0
#
#
#=======================================
BSNT_03969___ 1 ATGACTGCCGTAAATGATAAAATATCCACAATCGTTAATGGAAAGCGTGT 50
|||.||||.|||||.||||||||.||||.|||||||||||||||.||.||
BL02026___yrr 1 ATGTCTGCAGTAAAAGATAAAATTTCCAAAATCGTTAATGGAAAACGCGT 50
BSNT_03969___ 51 GATTACGAAAAAGCCGGAACTTCTCGCACCTGCGGGTAATCTTGAAAAGC 100
.||||||||||||||.||||||||.||.||.|||||.|||.|.|||||.|
BL02026___yrr 51 CATTACGAAAAAGCCAGAACTTCTTGCTCCGGCGGGGAATTTGGAAAAAC 100
BSNT_03969___ 101 TGAAAATCGCTGTTCATTACGGAGCGGACGCGGTCTTTATCGGGGGACAG 150
|||||||||||||.||.||.|||||.|||||.||.||||||||.||||..
BL02026___yrr 101 TGAAAATCGCTGTCCACTATGGAGCAGACGCTGTATTTATCGGCGGACGT 150
BSNT_03969___ 151 GAATACGGGCTTCGCTCGAATGCCGATAACTTTACGATCGAAGAAATTGC 200
|||||.||.||.|||||.||.||.|||||||||.|.||.||||||||.||
BL02026___yrr 151 GAATATGGACTCCGCTCAAACGCAGATAACTTTTCAATTGAAGAAATGGC 200
BSNT_03969___ 201 AGAAGGCGTTGAATTCGCAAAGAAATATGGCGCGAAG-ATCTACGTAACA 249
.|||||.||.||||||||.||.|||||.||||| ||| ||.||.||.||.
BL02026___yrr 201 TGAAGGTGTCGAATTCGCGAAAAAATACGGCGC-AAGAATTTATGTCACG 249
BSNT_03969___ 250 ACGAATATTTTCGCTCATAATGAAAACATGGACGGGCTTGAAGACTATTT 299
||.||.|||||.||.|||.|.|||||.||.|||||.||.|||||||||||
BL02026___yrr 250 ACAAACATTTTTGCGCATGAAGAAAATATCGACGGACTGGAAGACTATTT 299
BSNT_03969___ 300 AAAAGCG----CTTG-GAGACGCCAACGTTGCCGGTATTATTGTGGCAGA 344
||| ||.| |.|| ||...|||..|.||.|||||.||.||.||
BL02026___yrr 300 ----GCGCGATCTCGAGGGA-GCAGGCGTGTCAGGCATTATCGTCGCTGA 344
BSNT_03969___ 345 TCCGCTTATTATTGAAACATGCCGCAGAGTGGCGCCGAATGTTGAGGTTC 394
|||.||.||.||||||||.||||||||.||.||||||||..|.||.||.|
BL02026___yrr 345 TCCCCTGATCATTGAAACGTGCCGCAGGGTTGCGCCGAAGCTGGAAGTGC 394
BSNT_03969___ 395 ACTTGAGCACACAGCAGTCTCTTTCAAACTGGAAGGCTGTCCAGTTCTGG 444
|.|||||||||||||||||.||||||||||||||.||.||.|||||||||
BL02026___yrr 395 ATTTGAGCACACAGCAGTCCCTTTCAAACTGGAAAGCCGTTCAGTTCTGG 444
BSNT_03969___ 445 AAGGAAGAAGGTCTCGACCGCGTCGTGCTGGCACGTGAAACTAGCGCTCT 494
|||||||||||.||.||.||.||.|||||.|||||||||||.|||||.||
BL02026___yrr 445 AAGGAAGAAGGCCTTGAGCGGGTTGTGCTCGCACGTGAAACGAGCGCACT 494
BSNT_03969___ 495 TGAAATCAGAGAAATGAAAGAAAAGGTAGATATCGAAATCGAATCCTTCA 544
|||||||||.||||||||||||||.||.|||||.|||||||||.|.||.|
BL02026___yrr 495 TGAAATCAGGGAAATGAAAGAAAAAGTGGATATTGAAATCGAAACGTTTA 544
BSNT_03969___ 545 TTCATGGCGCAATGTGTATCGCATATTCCGGCCGCTGCGTGCTGAGCAAT 594
||||.||.||.|||||||||||.||||||||||||||||||||.|||||.
BL02026___yrr 545 TTCACGGTGCGATGTGTATCGCTTATTCCGGCCGCTGCGTGCTCAGCAAC 594
BSNT_03969___ 595 CACATGACAGCGCGGGATTCCAACCGCGGAGGCTGCTGCCAGTCATGCCG 644
||.|||||.||..||||.||||||||||||||||||||||||||||||||
BL02026___yrr 595 CATATGACGGCAAGGGACTCCAACCGCGGAGGCTGCTGCCAGTCATGCCG 644
BSNT_03969___ 645 CTGGGATTATGATCTCTATCAAACAGACGG------TGCCAAC-GCCGTT 687
||||||.||||||.|.|||||.||.||||| ||| || ||||
BL02026___yrr 645 CTGGGACTATGATTTGTATCAGACGGACGGGACGAATGC--ACTGCCG-- 690
BSNT_03969___ 688 GCTTTGTATGGTGAAGAAGATGCACCATTTGCGATGAGCCCGAAAGATTT 737
.|.||||..||||..|||||.||||||||||||||||||||||||.|
BL02026___yrr 691 ---CTATATGAAGAAGGCGATGCTCCATTTGCGATGAGCCCGAAAGATCT 737
BSNT_03969___ 738 GAAGCTGATTGAATCCATTCCGAAAATGATCGAAATGGGAATAGACAGCT 787
|||||||.|.|||||.||.|||.|||||||.||||||||.||.||||||.
BL02026___yrr 738 GAAGCTGGTCGAATCGATACCGCAAATGATTGAAATGGGCATCGACAGCC 787
BSNT_03969___ 788 TAAAGATTGAAGGCCGCATGAAATCCATTCACTATGTAGCAACTGTTGTC 837
|.||.||.||||||||.||||||||.||.|||||..|.||.||.||.|||
BL02026___yrr 788 TGAAAATCGAAGGCCGGATGAAATCGATCCACTACATTGCGACAGTCGTC 837
BSNT_03969___ 838 AGCGTATACCGCAAAGTAATCGATGCTTATTGCGCTGATCCAGAGAACTT 887
||.||.|||.|.|||||.|||||||||||||||||||||||.||.|||||
BL02026___yrr 838 AGTGTGTACAGAAAAGTGATCGATGCTTATTGCGCTGATCCTGAAAACTT 887
BSNT_03969___ 888 TGTGATTCAAA-AAGAATGGCTTGAAGAGCTCGATAAGTGCGCCAACCGG 936
.||.| ||||| ||||||||||..||||.||.||.||.||||||||..|.
BL02026___yrr 888 CGTCA-TCAAAGAAGAATGGCTGAAAGAACTGGACAAATGCGCCAATAGA 936
BSNT_03969___ 937 GACACTGCGACAGCTTTCTTTGAAGGAACGCCAGGCTATGAAGAGCAAAT 986
|||||.|||.|.|||||||||||||||||||||||.|||||||||||.||
BL02026___yrr 937 GACACGGCGCCTGCTTTCTTTGAAGGAACGCCAGGATATGAAGAGCAGAT 986
BSNT_03969___ 987 GTTCGGCGAACACGCCAAGAAAACGACATATGATTTTGTCGG-CTTAGTG 1035
||||||||..||||.|||.||.||.|||||.||.|||||||| ||| ||.
BL02026___yrr 987 GTTCGGCGTCCACGGCAAAAAGACAACATACGACTTTGTCGGACTT-GTC 1035
BSNT_03969___ 1036 CTGAATTATGATGAAGATACACAAATGGTCACGCTTCAGCAACGCAATTT 1085
||..|.|||||||||||.|||.|||||||||||||.|||||.||.||.||
BL02026___yrr 1036 CTTGACTATGATGAAGAGACAAAAATGGTCACGCTCCAGCAGCGGAACTT 1085
BSNT_03969___ 1086 CTTCAAAAAAGGCGACGAAGTGGAATTTTTCGGTCCAGAAATCGAAAACT 1135
|||.|||...||.||.|||||.||||||||||||||.|||||||||||
BL02026___yrr 1086 CTTTAAATCCGGAGATGAAGTCGAATTTTTCGGTCCGGAAATCGAAAA-- 1133
BSNT_03969___ 1136 TTACACAT--ACGATTGAAACCATTTGGGACGAAGACGGAAATGAGCTAG 1183
||.||||| |..|||||.||.||||||||||||.|.||.||||.|||.|
BL02026___yrr 1134 TTTCACATGCAAAATTGACACGATTTGGGACGAAAAAGGCAATGTGCTTG 1183
BSNT_03969___ 1184 ATGCTGCCCGCCATCCCCTGCAAATTGTCAAATTCAAACTAGACAAAAAG 1233
|.||.|||||||||||||||||.||.||||||||.|.|.|.|||||.|||
BL02026___yrr 1184 ACGCAGCCCGCCATCCCCTGCAGATCGTCAAATTTAGAGTGGACAACAAG 1233
BSNT_03969___ 1234 ATTTATCCGAGCAACATGATGAGAAAGGGGAAGTAA 1269
||||||||.|||||||||||||||||||||.|||||
BL02026___yrr 1234 ATTTATCCTAGCAACATGATGAGAAAGGGGCAGTAA 1269
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