Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03959 and BL02020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_03959___mtn.1.5803.seq
# -bsequence dna-align/BL02020___mtn.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03959___mtn-BL02020___mtn.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03959___mtn-BL02020___mtn.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03959___mtn
# 2: BL02020___mtn
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 730
# Identity: 503/730 (68.9%)
# Similarity: 503/730 (68.9%)
# Gaps: 92/730 (12.6%)
# Score: 1779.5
#
#
#=======================================
BSNT_03959___ 1 ------------------------ATGGAAGAGGAAGTTACCATCTTAAG 26
||||||||.|||||.||.||.||..|
BL02020___mtn 1 ATGAAAATCGCAGTTATCGGAGCAATGGAAGAAGAAGTCACGATTTTGCG 50
BSNT_03959___ 27 AGACAAACTTGAAAATGCAAAAACAGAAACG-------ATCGCACACTGT 69
|..||||||.|||.|..| |||.|| ||||||.|||||
BL02020___mtn 51 AAGCAAACTCGAACAGAC-------GAACCGGGAAGTCATCGCAAACTGT 93
BSNT_03959___ 70 GAATTTACAACAGGCGAATATGAAGGAACTGAAGTGATTCTTTTAAAATC 119
||||||||.|..||....||||||||||..||.||..|.||||||||.||
BL02020___mtn 94 GAATTTACCAGCGGGTTTTATGAAGGAAAAGAGGTCGTGCTTTTAAAGTC 143
BSNT_03959___ 120 AGGAATTGGAAAAGTAAATGCTGCTATCAGCACGACGCTTCTGCTTGACC 169
.||.||.||.|||||.|||||.||.||.|||||||||.||||||||||||
BL02020___mtn 144 CGGCATCGGCAAAGTCAATGCAGCCATGAGCACGACGATTCTGCTTGACC 193
BSNT_03959___ 170 GTTACAAGCCTGATTATGTCATTAACACAGGCTCAGCCGGCGGATTTCAT 219
|.|..||.||.||...||||||.|||||.||.|||||||||||.||||||
BL02020___mtn 194 GCTTTAAACCGGACGTTGTCATCAACACCGGATCAGCCGGCGGCTTTCAT 243
BSNT_03959___ 220 CATACATTGAATGTAGGGGATGTCGTCATTTCCACTGACGTTCGCCACCA 269
|||.|..|.|||||.||.|||.|||||||.||.||.||.||.|||||.||
BL02020___mtn 244 CATTCGCTTAATGTCGGAGATATCGTCATCTCGACCGAAGTCCGCCATCA 293
BSNT_03959___ 270 TGATGTAGACGTAACGGCTTTTGACTATGAATACGGCCAAGTGCCGGGTC 319
.|||||.||.||.|||||.|||||.||||||||.||.||.||.|||..||
BL02020___mtn 294 CGATGTCGATGTCACGGCATTTGATTATGAATATGGACAGGTTCCGAATC 343
BSNT_03959___ 320 TTCCGGCTGCTTATGCGGCGGATGAAAAGCTGATCA--GCAT-----CA- 361
|.|||||||| ||..|||||.|| || |||| ||
BL02020___mtn 344 TGCCGGCTGC-----------ATACAAAGCCGA-CAATGCATTGATCCAA 381
BSNT_03959___ 362 ----CTGAA---GAAGCGGTATCTGAACTCGACGG--CATTCAGGTTGCA 402
|.||| |||||| ||||||||.| || |||||||||||..
BL02020___mtn 382 GCGGCGGAAGACGAAGCG---TCTGAACTGG--GGCACATTCAGGTTGTC 426
BSNT_03959___ 403 AAAGGAACGATTGCAACAGGCGATTCTTTCATGAACGATCCGAAGCGGGT 452
|||||||||||.||||||||||||||.||.||||.||||||..|.||.||
BL02020___mtn 427 AAAGGAACGATAGCAACAGGCGATTCCTTTATGAGCGATCCTGACCGCGT 476
BSNT_03959___ 453 TGAAGAGGT------GCGTGCGAGATTTTCTGATCTGTACGCGGTTGAAA 496
.|.| | ||| ||.|| |||...||.||.|||||||||||||
BL02020___mtn 477 CGCA----TTCATCCGCG-GCAAG-TTTGAAGACCTTTACGCGGTTGAAA 520
BSNT_03959___ 497 TGGAGGCTGCGGCAGTGGCTCAAGTGTGCCATCAATTTAAAACGCCGTTT 546
||||.||||||||.||.||.||.||.|...||||||||||.|||||||||
BL02020___mtn 521 TGGAAGCTGCGGCTGTCGCGCAGGTTTCTTATCAATTTAATACGCCGTTT 570
BSNT_03959___ 547 GTCGTCATCAGAGCATTATCTGATATTGCAGGAAAAGAATCACATGTTTC 596
||.||||||||.||..|.||.||.||.||.|||||||||||..|..||||
BL02020___mtn 571 GTTGTCATCAGGGCGCTCTCAGACATCGCCGGAAAAGAATCTGAAATTTC 620
BSNT_03959___ 597 ATTTGACCAATTTTTAGAGCAGGCGGCTGTCCATTCAACAGAGCTTGTGT 646
|||||||||||||||.||.|||||.||....|||||.|||||.||||||.
BL02020___mtn 621 ATTTGACCAATTTTTGGAACAGGCTGCCAAGCATTCGACAGATCTTGTGC 670
BSNT_03959___ 647 T----AAAGGTGATCAAACGAATTCATTAA 672
| | ||||.|||.||||..|||||
BL02020___mtn 671 TTCGCA----TGATTAAAAGAATCAATTAA 696
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