Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03962 and BL02017
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_03962___yrzA.1.5803.seq
# -bsequence dna-align/BL02017___yrzA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03962___yrzA-BL02017___yrzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03962___yrzA-BL02017___yrzA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03962___yrzA
# 2: BL02017___yrzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 214
# Identity: 144/214 (67.3%)
# Similarity: 144/214 (67.3%)
# Gaps: 20/214 ( 9.3%)
# Score: 453.0
#
#
#=======================================
BSNT_03962___ 1 ATGAATTT-----TCAATTAGATCTGATTAAAGACAAAGTGGAATTTTTT 45
|||||.|| || ||||||||.|||||.|||.|.||.||||||
BL02017___yrz 1 ATGAACTTCGGCCTC-----GATCTGATCAAAGATAAAATTGAGTTTTTT 45
BSNT_03962___ 46 GAAGC----GGCTTCATTGCAAGAGCTTGAAAAGAAAATCAATACA-CAA 90
||.|| .|| ||..|.|||||||||||.||.||||.| || ||.
BL02017___yrz 46 GAGGCACTGAGC----TTAGAGGAGCTTGAAAAAAAGATCAGT-CAGCAG 90
BSNT_03962___ 91 ATTGAAAACAATAAAGCCATCATGCTCCGGGTGAAATCTGTTTCACACCA 140
|||||||||||..|.||.||..||||..||||..|.||.|||||.|||||
BL02017___yrz 91 ATTGAAAACAACCAGGCGATTTTGCTGAGGGTCCATTCGGTTTCCCACCA 140
BSNT_03962___ 141 AACTGCTGTGGCAGAAGGAAGAATATTGTACAGCGCGGTGGTTCATTTCG 190
.||.||.||....||.|||.|.||....||||||||.||.||||||||..
BL02017___yrz 141 TACGGCGGTTATTGACGGACGGATCCACTACAGCGCAGTCGTTCATTTTA 190
BSNT_03962___ 191 CAGCTGAAGCCTAA 204
.|||.|||.|.|||
BL02017___yrz 191 AAGCCGAATCATAA 204
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