Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00912 and BL02008
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence dna-align/BSNT_00912___ydeO.1.5803.seq
# -bsequence dna-align/BL02008___ydeO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00912___ydeO-BL02008___ydeO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00912___ydeO-BL02008___ydeO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00912___ydeO
# 2: BL02008___ydeO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity: 750/873 (85.9%)
# Similarity: 750/873 (85.9%)
# Gaps: 0/873 ( 0.0%)
# Score: 3258.0
#
#
#=======================================
BSNT_00912___ 1 ATGAATACAACCAAAAAACATAAGAAATTTAAAGCGAAAATGATTTTCCA 50
|||||||.||.|.|||||||||.||||||||.||||||.|||||||||.|
BL02008___yde 1 ATGAATAAAATCGAAAAACATAGGAAATTTAGAGCGAAGATGATTTTCAA 50
BSNT_00912___ 51 AATCATCATGGTTATCATTGGAGGAATCATAGCGGCGTATGGACTAGAAA 100
|.||||.|||||.||.||.|||||||||||||||||.||||||.|.||||
BL02008___yde 51 AGTCATAATGGTCATGATCGGAGGAATCATAGCGGCATATGGATTGGAAA 100
BSNT_00912___ 101 CAGTGCTCATTCCAAACAGTGTATCTGATGGAGGGGTGACGGGTCTGAGC 150
|||||||.|||||||||||||||||||||||.||.|||||.||.||.|||
BL02008___yde 101 CAGTGCTGATTCCAAACAGTGTATCTGATGGCGGAGTGACAGGACTTAGC 150
BSNT_00912___ 151 ATCGTTGGTTCACAGCTATTCAACTTGCCGCTGGGGATTTTGATTGCTGT 200
||.|||||||||||.||.||..|.||||||||.||||||.|.||.||.||
BL02008___yde 151 ATTGTTGGTTCACAACTGTTTGATTTGCCGCTTGGGATTCTTATCGCGGT 200
BSNT_00912___ 201 GATCAACATTCCATTTGTCTGGTTAGGATATAAGCAAATTGGGAAAAGCT 250
..|.|||||.||.|||||||||.|.||||||||||||||.||||||||||
BL02008___yde 201 TTTAAACATACCGTTTGTCTGGCTGGGATATAAGCAAATCGGGAAAAGCT 250
BSNT_00912___ 251 TTGCATTATTATCAATTATCGGAATCGTATCGCTTGCCGCGGGGACAAGC 300
||||..||||.||.|||||||||||||.|||.|||||.||.||||||||.
BL02008___yde 251 TTGCGCTATTGTCCATTATCGGAATCGCATCACTTGCAGCAGGGACAAGT 300
BSNT_00912___ 301 TTTTTTCACCACACACCCGCTATCATAGAAGGAGATACCCTGTTAATTAC 350
|||.|.||||||||.||.|||||.||.|||||.||||||.||.||.|.||
BL02008___yde 301 TTTATGCACCACACTCCAGCTATAATCGAAGGGGATACCTTGCTAGTCAC 350
BSNT_00912___ 351 CGTTGTCGGCGGGATTATCCTTGGATTCGGAATGGGGCTGGCGCTGCGTA 400
.||||||||.|||||.|||||||||||.|||||||||||||||||.||.|
BL02008___yde 351 TGTTGTCGGGGGGATCATCCTTGGATTTGGAATGGGGCTGGCGCTCCGCA 400
BSNT_00912___ 401 ATGGCGGCGCATTAGATGGAATTGACATGCTTGCTGTGCTGCTATCCCGA 450
|||||||.|||||.||.||||||||.|||||||||||..||.||||.|||
BL02008___yde 401 ATGGCGGAGCATTGGACGGAATTGATATGCTTGCTGTTTTGTTATCGCGA 450
BSNT_00912___ 451 AAACTGCCATTCGGAACGAGCGATCTCATTCTATTCTTAAACCTATTTGT 500
|||.|||||||.||||||||||||||.|||||||||||.|||||.|||||
BL02008___yde 451 AAATTGCCATTTGGAACGAGCGATCTTATTCTATTCTTTAACCTTTTTGT 500
BSNT_00912___ 501 GTTTATTTTTGTTTCCACAGTATTTGGCTTACAAGGGGCATTGCTTTCAG 550
||||||||||||||||.|.|||||||||||.||.|||||||||||.||||
BL02008___yde 501 GTTTATTTTTGTTTCCGCTGTATTTGGCTTGCAGGGGGCATTGCTGTCAG 550
BSNT_00912___ 551 TCATTGCTTACTACATTGCATCCAAAGTGATTCATGTTGTGGAGGAAGGC 600
|||||||.||||||||.||.||||||||.|||||||||||.||||||||.
BL02008___yde 551 TCATTGCCTACTACATCGCGTCCAAAGTCATTCATGTTGTCGAGGAAGGG 600
BSNT_00912___ 601 TTAAGCGGCTCTAAAACCTTTCAAATTATTACAACCCAACCTGAATTAAT 650
||||||||.||||||||.||||||||.|||||||.|.|||||||||||||
BL02008___yde 601 TTAAGCGGATCTAAAACTTTTCAAATCATTACAAGCGAACCTGAATTAAT 650
BSNT_00912___ 651 GGTAGAGACAATACGTGATCAATTAGGCCGAAGCGCCACATATAAAGAAG 700
|||.||||||||.|||||||||||.||||||||.||.|||||||||||||
BL02008___yde 651 GGTTGAGACAATTCGTGATCAATTGGGCCGAAGTGCTACATATAAAGAAG 700
BSNT_00912___ 701 CTTACGGGGGTTTTTCCCACGAGAAATTTAAAGAAATCACATGTGTCATC 750
||||||||||||||||||||||||||||||||||||||||.|||||||||
BL02008___yde 701 CTTACGGGGGTTTTTCCCACGAGAAATTTAAAGAAATCACCTGTGTCATC 750
BSNT_00912___ 751 AATCGTTTAGAAGAAACCAAACTAAAGGAAATTATTAATGATATTGATAA 800
||.||.||||||||.||||||.||||.|||||.||||||||..|||||||
BL02008___yde 751 AACCGCTTAGAAGACACCAAATTAAAAGAAATCATTAATGAAGTTGATAA 800
BSNT_00912___ 801 ATCCGCCTTTGTCACCGTATATGACGTAGCTGAAGTGAAGGGCAGCAATT 850
|...||.|||||.||.||||||||||||||||||||.||||||||.||||
BL02008___yde 801 AAATGCTTTTGTTACTGTATATGACGTAGCTGAAGTTAAGGGCAGTAATT 850
BSNT_00912___ 851 TTAGAAGTCTTAATCATCATTAA 873
||||||..|.||||..||||||.
BL02008___yde 851 TTAGAAAACCTAATATTCATTAG 873
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