Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03038 and BL01997
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_03038___dacC.1.5803.seq
# -bsequence dna-align/BL01997___dacC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03038___dacC-BL01997___dacC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03038___dacC-BL01997___dacC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03038___dacC
# 2: BL01997___dacC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1642
# Identity: 973/1642 (59.3%)
# Similarity: 973/1642 (59.3%)
# Gaps: 308/1642 (18.8%)
# Score: 2699.0
#
#
#=======================================
BSNT_03038___ 1 ATGATGAAGCGCAGAGAGGCGGGGAAATTAATGAAAAAAAGCATA--AAG 48
|||||.||| |||| |||
BL01997___dac 1 ------------------------------ATGAAGAAA--CATATGAAG 18
BSNT_03038___ 49 CTT--------TATGTTGCTGTTTTACTGCTTTTCGTCATTG-CTTCGGT 89
||| ||||.||.||.| |||| || |||| |||.||
BL01997___dac 19 CTTTGTCTGTGTATGATGATGAT------CTTT--GT-ATTGACTTTGG- 58
BSNT_03038___ 90 GCCTTATATGCATCAGGCTGC-------GCTT-GCCGCTGAAAAACAAGA 131
|.|||.|| |||| |.||||||..||.|||.
BL01997___dac 59 -------------CCGGCAGCATGGACGGCTTGGGCGCTGAGGAAAAAGG 95
BSNT_03038___ 132 TGCACTTTCCGGGCAGATCGATAAGATTTTAGCTGATC-ATCCTGCCCTC 180
.|..||....|.|||.||||||.||.|.||| ..||.| |.||||...|.
BL01997___dac 96 CGGGCTCAAAGAGCAAATCGATCAGCTGTTA-AAGACCGAACCTGATTTA 144
BSNT_03038___ 181 GAAGGCGCAATGGCCGGCATCACCGTTCGCTCTGCGGAAACAGGTGCTG- 229
.||||.||..|.||.|||||||.|||..|.|||||||||| ||.|
BL01997___dac 145 AAAGGAGCGCTCGCAGGCATCAGCGTCAGGTCTGCGGAAA-----GCGGG 189
BSNT_03038___ 230 ----TTCTATATGAACATTCAGGAGACACCCGAATGAGGCCTGCCTCTTC 275
|..||||.|.||||...||.||.||.||.|||||.|||||.||...
BL01997___dac 190 AAAATGATATACGGACATATGGGCGATACACGGATGAGACCTGCGTCCAA 239
BSNT_03038___ 276 TCTAAAGCTTTTGACAGCGGCCGCGGCACT-TTCTGTCCTTGGCGAGAAC 324
|||.||||||||.||.||.||.||.|| || |||.|||||.||||||.||
BL01997___dac 240 TCTGAAGCTTTTAACGGCAGCAGCTGC-CTATTCCGTCCTGGGCGAGGAC 288
BSNT_03038___ 325 TATTCTTTTACAACCGAGGTCCGGACGGAT---------------GGAAC 359
|||.|.|||.|.||.|||||...|.|.||| ||.||
BL01997___dac 289 TATACCTTTCCCACAGAGGTAATGGCTGATGGGGCGCGAGCCGCGGGCAC 338
BSNT_03038___ 360 ACTGAAAGGGAAAAAGCTGAATGGTAACCTTTATTTGAAAGGGAAAGGCG 409
|||.||| ||.|.|||||||.|.|||||.|||||||
BL01997___dac 339 ACTCAAA---------------GGCAGCCTTTATATAAAAGGAAAAGGCG 373
BSNT_03038___ 410 ATCCGACACTTTTACCATCTGATTTTGACAAAATGGCTGAGAAATTGAAA 459
|||||||.|||||..||.|.||.|||.|..||||||| .||
BL01997___dac 374 ATCCGACGCTTTTGACAGCGGACTTTCAGCAAATGGC----------CAA 413
BSNT_03038___ 460 A--ATTCCGGCGTAAAAGTAATTAAAGGCA--------ATC--------- 490
| |.|||| |||| .||||.| |||
BL01997___dac 414 AGCACTCCG----AAAA------CAAGGGATCACAGTTATCCGGGGAGAC 453
BSNT_03038___ 491 -TGATCGGTGATGATACGTGGCATGATGACAT--GCGATTATC---ACCT 534
||.||||.||||||.|.|||.|.|||||.|| ||.|||.|| ||||
BL01997___dac 454 TTGGTCGGCGATGATTCCTGGTACGATGAAATCCGCTATTCTCAAGACCT 503
BSNT_03038___ 535 GATATGCCTTGGAGCGATGAATACACATATTATGGCGCGCCAATCTCCGC 584
|.|| ||||.|||||||.||.||||.|||||.||||..||.||.||
BL01997___dac 504 ----TTCC-TGGACCGATGAAGACGCATACTATGGAGCGCAGATTTCAGC 548
BSNT_03038___ 585 TCTAACAGCGTCTCCGAATGAAGACTATGATGCAGGCACTGTGATTGTTG 634
|.||||.|..||.||.|||||||||||||||||.||.||.||.||..|.|
BL01997___dac 549 TTTAACTGTTTCGCCAAATGAAGACTATGATGCCGGAACGGTCATAATCG 598
BSNT_03038___ 635 AGGTCACCCC--------AAATC--AAAAAGAAGGGGAAGAGCCTGCCGT 674
|.||.|.||| |||.| ||||| |.|||||.||
BL01997___dac 599 ACGTGAACCCTGCCGGAAAAACCGGAAAAA----------AACCTGCTGT 638
BSNT_03038___ 675 GTCTG-TCTCTCCGAAAACCGATTATATAACGATAAAGAACGATGCTGAA 723
.| || ||.|.|||.||||..|..||.|.|..||.||.||||||||..|.
BL01997___dac 639 AT-TGCTCACCCCGCAAACAAACCATGTCAAAATCAAAAACGATGCCAAG 687
BSNT_03038___ 724 ACGACTGCTGCCGGTTCAGAGAAAGACCTCACAATCGAAAGAGAGCATGG 773
||...||||||||....|.|.|||||..||||.||..||||..|.||.||
BL01997___dac 688 ACTGTTGCTGCCGACGGAAAAAAAGATATCACGATTAAAAGGAAACACGG 737
BSNT_03038___ 774 AACAAACACGATTACAATTGAAGGGAGCG-TACCGGTTGACTCAAACAAG 822
|..|||.||.||...|||..|||||| || |.|| |||||
BL01997___dac 738 AGGAAATACCATCCAAATCAAAGGGA-CGATTCC-----------ACAAG 775
BSNT_03038___ 823 -----ACAAAGG------AATGGATTTCTGTCTGGGAGCCTGCCGGATAT 861
.|||.|| |||||.||.|.||.||||||||..|.|.||||
BL01997___dac 776 GCGCTTCAAGGGTCAGACAATGGGTTGCGGTTTGGGAGCCGTCAGAATAT 825
BSNT_03038___ 862 GCCTTAGATTTATTTAAGCAGTCACTAAAAAAACAAGGTAT-----TACT 906
||..|.|||||||||||.|||.|..||.|..|||||||.|| |.||
BL01997___dac 826 GCACTCGATTTATTTAAACAGGCTTTACATCAACAAGGCATTCGAATCCT 875
BSNT_03038___ 907 GTGAAAG---------GGGACATC----AAGACGGGTGAAGCACCTAGTT 943
|.||||| ||.|.|.| ||.||.| .||||| .
BL01997___dac 876 GGGAAAGACTAAAATCGGCAAAGCGCCAAAAACAG----CGCACC----G 917
BSNT_03038___ 944 CTTCAGATGTGCTGCTCTCTCATCGCTCAATGCCTTTATCGAAACTTTTT 993
|.||| .|.|.||||..||.|||||..|.||..|.||..|.
BL01997___dac 918 CATCA----------CCACACATCAATCCATGCCGCTGTCAGAGCTGATG 957
BSNT_03038___ 994 GTGCCGTTCATGAAATTAAGTAATAACGGACATGCCGAAGTGCTCGTAAA 1043
.|.||.||.|||||..|.||.||.|||||.||||.||||..|||..|.||
BL01997___dac 958 ATTCCCTTTATGAAGCTCAGCAACAACGGCCATGGCGAAACGCTGATCAA 1007
BSNT_03038___ 1044 AGAGATGGGGAAAGTG--AAAAAAGGAGAAGGGAGCTGGGAAAAGGGGCT 1091
.||.||||| |||.| ...|.|.|.|||||.||||||||..|.|||||
BL01997___dac 1008 GGAAATGGG--AAGGGCCGCGAGACGTGAAGGAAGCTGGGATCAAGGGCT 1055
BSNT_03038___ 1092 CGAAGTGTTAAACAGTAC---ACTTCCAAAATTTGGTGTTGATTCTAAAT 1138
.||.|||||||| ||| |||.|..|.||||||..|.||..|..||.
BL01997___dac 1056 AGAGGTGTTAAA---TACGGAACTGCAGAGATTTGGACTGGACACGGAAA 1102
BSNT_03038___ 1139 CACTCGTCTTAAGGGACGGATCAGGAATCTCACATA-----TTGA-TGCT 1182
.|.||||..|.||.|||||.|||||.|||||.|||| |||| |.||
BL01997___dac 1103 AAATCGTTCTCAGAGACGGCTCAGGCATCTCGCATATCAATTTGATTTCT 1152
BSNT_03038___ 1183 GTATCCTCAGATCAACTTTCACAGCTGTTATATGACATTCAGGATCAGAG 1232
|.| |.|||||||| ||.||||.||.|||..|.||||.||..|||.
BL01997___dac 1153 GCA-CATCAGATCA-----CAAAGCTATTGTATTCCGTTCAAGACGAGAA 1196
BSNT_03038___ 1233 TTGGTTCTCGGCTTATCTAAATTCATTACCTGTTGC--GGGCAACCCTGA 1280
.|||||..||.|.|.|.....||||.|.||.||||| |.|.||.| ||
BL01997___dac 1197 ATGGTTTCCGTCGTTTGCCCGTTCACTCCCAGTTGCAGGTGAAAGC--GA 1244
BSNT_03038___ 1281 CAGAATGGTGGGCGGAACGCTGAGAAACCGCATGAAAGACACTCCTGCAC 1330
|||||||||.|||||.||..|.||||||||..||||||||.|..||..|.
BL01997___dac 1245 CAGAATGGTCGGCGGCACATTAAGAAACCGGCTGAAAGACCCGGCTCTAA 1294
BSNT_03038___ 1331 AAGGAAAAGTAAGAGCAAAAACCGGATCGC--TCAGTACGGTAAGCTCTC 1378
||||||||||.||.||.|||||.||.||.| ||| ||.||.||.||..
BL01997___dac 1295 AAGGAAAAGTCAGGGCGAAAACTGGCTCTCTTTCA--ACCGTCAGTTCCT 1342
BSNT_03038___ 1379 TATCGGGGTACGCAGAAACAAAGAGCGGAAAAAAACTTG-TTTTCTCTAT 1427
|.|||||.||.|..||.||....||||||||.|.| ||| |||||||.||
BL01997___dac 1343 TGTCGGGCTATGTCGATACTGCAAGCGGAAAGACA-TTGATTTTCTCCAT 1391
BSNT_03038___ 1428 TCTTCTAAAT-GGATTGATTGATGAAGAGGATGGAAAAGATATTGAGGAT 1476
|||.||.||| .|.|.| |.|||||.|||.|.|||||.||||||||.||.
BL01997___dac 1392 TCTCCTCAATCAGCTCG-TGGATGATGAGAAAGGAAAGGATATTGAAGAC 1440
BSNT_03038___ 1477 CAAATCGCTGTCATTTTGGCAAATCAATAA------------ 1506
.||||||.| ||||| ||.|
BL01997___dac 1441 AAAATCGTT----------CAAAT--ATTAGCTTCTTCATGA 1470
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