Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02085 and BL01996
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence dna-align/BSNT_02085___yjlD.1.5803.seq
# -bsequence dna-align/BL01996___yjlD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02085___yjlD-BL01996___yjlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02085___yjlD-BL01996___yjlD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02085___yjlD
# 2: BL01996___yjlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1179
# Identity: 969/1179 (82.2%)
# Similarity: 969/1179 (82.2%)
# Gaps: 0/1179 ( 0.0%)
# Score: 4005.0
#
#
#=======================================
BSNT_02085___ 1 ATGTCAAAACATATTGTCATTCTAGGCGCTGGTTATGGCGGAGTTCTTTC 50
||||||||||||||.||||||.|||||||||||||.||||||.|.||.||
BL01996___yjl 1 ATGTCAAAACATATCGTCATTTTAGGCGCTGGTTACGGCGGATTACTGTC 50
BSNT_02085___ 51 TGCTCTAACAGTTCGCAAACATTACACAAAAGAACAAGCACGCGTGACAG 100
|||||||||||||||||||||.||||||||||||.|||||...||.||||
BL01996___yjl 51 TGCTCTAACAGTTCGCAAACACTACACAAAAGAAGAAGCAAAAGTCACAG 100
BSNT_02085___ 101 TGGTAAACAAATACCCTACTCACCAAATCATTACGGAATTACACCGCCTT 150
||||.|||.||||.||.||.||.||||||||.||||||||.|||||||||
BL01996___yjl 101 TGGTTAACCAATATCCGACACATCAAATCATCACGGAATTGCACCGCCTT 150
BSNT_02085___ 151 GCTGCAGGCAACGTGTCTGAAAAAGCGGTTGCAATGCCATTAGAAAAACT 200
|||||.|||||||||||.|||.|.||.|||||.|||||..|.|.|||.||
BL01996___yjl 151 GCTGCGGGCAACGTGTCAGAACAGGCAGTTGCGATGCCGCTTGCAAAGCT 200
BSNT_02085___ 201 TTTCAAAGGCAAAGACATTGATCTTAAAATTGCGGAAGTAAGTTCTTTCT 250
|||||||||.||||||||.|||||||||||.||..||||.|..|||||||
BL01996___yjl 201 TTTCAAAGGAAAAGACATCGATCTTAAAATCGCCAAAGTCAACTCTTTCT 250
BSNT_02085___ 251 CTGTTGATAAAAAAGAAGTTGCGCTTGCTGACGGTTCTACATTAACTTAC 300
|.|||||.|||||||||||.||.|||.|||||||.|||||..|.||.||.
BL01996___yjl 251 CAGTTGACAAAAAAGAAGTCGCTCTTTCTGACGGCTCTACCCTGACATAT 300
BSNT_02085___ 301 GATGCGCTTGTTGTAGGTCTTGGTTCGGTAACGGCTTACTTCGGCATCCC 350
||.||.|||||.||.|||||||||||.||.||.||||||||||||||.||
BL01996___yjl 301 GACGCACTTGTCGTCGGTCTTGGTTCTGTCACTGCTTACTTCGGCATTCC 350
BSNT_02085___ 351 AGGTCTTGAAGAAAACAGCATGGTATTGAAATCTGCTGCTGATGCGAACA 400
.||.||||||||||||||||||||..|.||||||||....|||||.||||
BL01996___yjl 351 GGGACTTGAAGAAAACAGCATGGTGCTCAAATCTGCAAACGATGCAAACA 400
BSNT_02085___ 401 AAGTCTTCCAGCATGTTGAAGATCGTGTGCGCGAGTACTCTAAAACGAAA 450
||.|||||.|||||||||||||.||.||||||||.|||.|.|||||||||
BL01996___yjl 401 AAATCTTCAAGCATGTTGAAGAGCGCGTGCGCGAATACGCGAAAACGAAA 450
BSNT_02085___ 451 AATGAAGCAGATGCAACAATCCTTATCGGCGGCGGCGGCTTAACAGGCGT 500
||.|||||.|||||.||.|||.|.||||||||||||||..||||||||||
BL01996___yjl 451 AACGAAGCTGATGCTACGATCTTAATCGGCGGCGGCGGACTAACAGGCGT 500
BSNT_02085___ 501 TGAGCTTGTTGGTGAGCTTGCTGACATCATGCCGAACCTTGCGAAAAAAT 550
.||||||||.|||||.||.||.||.||||||||||.||||||||.||..|
BL01996___yjl 501 CGAGCTTGTCGGTGAACTCGCCGATATCATGCCGAGCCTTGCGAGAAGCT 550
BSNT_02085___ 551 ACGGCGTAGACCATAAAGAAATCAAATTGAAACTTGTTGAAGCAGGTCCG 600
||||.||.||.|..|.|||||||||..||||.|||||||||||.||||||
BL01996___yjl 551 ACGGTGTCGATCCGACAGAAATCAAGCTGAAGCTTGTTGAAGCCGGTCCG 600
BSNT_02085___ 601 AAAATCCTTCCTGTTCTTCCGGATGATCTTATCGAACGTGCGACTGCAAG 650
||||||||.||.||||||||||||||.||.||||||||||||||....||
BL01996___yjl 601 AAAATCCTGCCGGTTCTTCCGGATGAGCTGATCGAACGTGCGACAAAGAG 650
BSNT_02085___ 651 CCTTGAAAAACGCGGCGTTGAGTTCTTAACAGGTCTTCCTGTTACAAATG 700
|||||||||||||||||||||.|||||.|||||.||.|||||.|||||||
BL01996___yjl 651 CCTTGAAAAACGCGGCGTTGAATTCTTGACAGGACTGCCTGTCACAAATG 700
BSNT_02085___ 701 TAGAAGGAAACGTAATTGATCTGAAAGACGGATCTAAAGTTGTTGCCAAC 750
|||||||||||||..|||||.|||||||||||...|||.|||||.|.||.
BL01996___yjl 701 TAGAAGGAAACGTTGTTGATTTGAAAGACGGACAAAAAATTGTTACAAAT 750
BSNT_02085___ 751 ACATTTGTTTGGACTGGCGGCGTACAAGGTAACCCATTAGTCGGTGAATC 800
||||||||.|||||.|||||.||.|||||.||.||..|..||||.|||||
BL01996___yjl 751 ACATTTGTCTGGACCGGCGGTGTTCAAGGCAATCCGCTGATCGGCGAATC 800
BSNT_02085___ 801 AGGCCTAGAAGTGAACCGCGGACGCGCGACTGTAAATGACTTCCTGCAAT 850
|||.||.|||||.||||||||||||||.||||||||.||||||||.||||
BL01996___yjl 801 AGGTCTTGAAGTCAACCGCGGACGCGCAACTGTAAACGACTTCCTTCAAT 850
BSNT_02085___ 851 CTACATCTCATGAAGATGTATTCGTTGCTGGAGACAGCGCAGTTTACTTC 900
|||||||.||||||||.||.||.|||||.||.||||||||.|||..||||
BL01996___yjl 851 CTACATCACATGAAGACGTGTTTGTTGCAGGGGACAGCGCCGTTGTCTTC 900
BSNT_02085___ 901 GGTCCAGACGGCCGTCCATACCCGCCAACTGCACAAATCGCATGGCAAAT 950
|||||.||.||||||||.|||||.||.||.||.|||||||||||||||||
BL01996___yjl 901 GGTCCGGATGGCCGTCCGTACCCTCCGACAGCTCAAATCGCATGGCAAAT 950
BSNT_02085___ 951 GGGTGAGCTGATCGGTTACAACCTATTTGCTTACCTGGAAGGCAAAACGC 1000
|||.|||||||||||.||||||||.|.|||.|||.|.|||..||||.|..
BL01996___yjl 951 GGGCGAGCTGATCGGCTACAACCTGTATGCATACTTAGAAAACAAATCAA 1000
BSNT_02085___ 1001 TTGAAACATTCAAGCCAGTAAACTCTGGTACACTTGCAAGCCTTGGACGC 1050
|.|..||.||||..||.||.|||||.|||||.|||||||||||.||.|||
BL01996___yjl 1001 TGGCGACGTTCAGCCCTGTCAACTCAGGTACGCTTGCAAGCCTGGGCCGC 1050
BSNT_02085___ 1051 AAAGACGCGGTTGCCATCATTGGTGCTAATTCTACACCGCTTAAAGGTCT 1100
||||||||.||||||.|.||.||.||.||....|||.|.||||||||.||
BL01996___yjl 1051 AAAGACGCAGTTGCCGTTATCGGCGCGAACAGCACATCTCTTAAAGGCCT 1100
BSNT_02085___ 1101 TCCTGCTTCCTTGATGAAAGAAGCAAGTAACGTACGCTATTTAACACACA 1150
.||||||||.||||||||||||||.||.|||||.|||||..|.|..||||
BL01996___yjl 1101 GCCTGCTTCATTGATGAAAGAAGCGAGCAACGTCCGCTACCTGAGCCACA 1150
BSNT_02085___ 1151 TTAAAGGACTTTTCAGCCTGGCTTACTAA 1179
|.|||||.||.||||||||||||||.|||
BL01996___yjl 1151 TAAAAGGTCTGTTCAGCCTGGCTTATTAA 1179
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