Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02084 and BL01995
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_02084___yjlC.1.5803.seq
# -bsequence dna-align/BL01995___yjlC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02084___yjlC-BL01995___yjlC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02084___yjlC-BL01995___yjlC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02084___yjlC
# 2: BL01995___yjlC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 440
# Identity: 337/440 (76.6%)
# Similarity: 337/440 (76.6%)
# Gaps: 22/440 ( 5.0%)
# Score: 1321.5
#
#
#=======================================
BSNT_02084___ 1 ATGCCAGAAACAATC------------GATCAAACAAATGCGTCTGTCAG 38
|||||.||||||||| |||||||||||.|..|||||.||
BL01995___yjl 1 ATGCCGGAAACAATCGATCAAACAGCTGATCAAACAAACGAATCTGTAAG 50
BSNT_02084___ 39 CCAAAGCCAGCAAGATCTTATTGATCAGCTATTAAAGCCAGAAGTTCAAG 88
|||||||||.|..||||||||.|||||.||..||||.||.|||||.||.|
BL01995___yjl 51 CCAAAGCCAACGCGATCTTATCGATCAACTGCTAAAACCTGAAGTACAGG 100
BSNT_02084___ 89 AATCATTGACTGTTTTAGTTGACCAGCTTCCGAAGCTGACTGAGTTAGTG 138
|.||.||||||||||||||.|||||||||||.||||||||.||..|.||.
BL01995___yjl 101 AGTCTTTGACTGTTTTAGTCGACCAGCTTCCAAAGCTGACAGAACTGGTC 150
BSNT_02084___ 139 AATATTTTAACGAAGTCTTATGATTTCGCTCAGTCTGTAGCGACTGACGA 188
||.|||||.||.||||||||.||.|||||.||.||.||.||.|||||.||
BL01995___yjl 151 AACATTTTGACAAAGTCTTACGACTTCGCACAATCCGTTGCAACTGATGA 200
BSNT_02084___ 189 AGTGTTAAAGAGCGACACAGTCGGTGCGATCACTGAAATTCTCGAGCCTG 238
|||.|||||.|..||.||.||||||||.||.||.||||||||.|||||||
BL01995___yjl 201 AGTATTAAAAAATGATACGGTCGGTGCCATTACAGAAATTCTTGAGCCTG 250
BSNT_02084___ 239 TAAAAGAAACAGCGAAAGAAGTAGCTGCGACTGCGATCGAAGCAAAAGAC 288
|.|||||.||.||.||||||.|.||.||.||.||.||.||||||||||||
BL01995___yjl 251 TCAAAGATACGGCAAAAGAAATCGCGGCTACCGCCATTGAAGCAAAAGAC 300
BSNT_02084___ 289 CGCGCGGAAGCAAGCAACGAAACAATTGGACTTTTCGGCCTTCTTCGC-- 336
|||||.||.|.||||||.|||...||.||||||||||| ||.||
BL01995___yjl 301 CGCGCTGACGAAAGCAATGAAGTCATCGGACTTTTCGG-----TTTGCTG 345
BSNT_02084___ 337 ---ATGCTGAAAGATCCTCAAGCTCAAAAGCTGTTCCGTTTTGCTAACAG 383
|||||.||||||||.||.||.||||||||||||||.||||.|.|.||
BL01995___yjl 346 AAAATGCTTAAAGATCCGCAGGCCCAAAAGCTGTTCCGATTTGTTCAAAG 395
BSNT_02084___ 384 CTACCTTGAAGTCATGAACGAACGCGAAAACCAAAAATAA 423
||||||..||.|||||...|||||||||||.|||||||||
BL01995___yjl 396 CTACCTGCAAATCATGTCAGAACGCGAAAAACAAAAATAA 435
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