Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03049 and BL01994
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_03049___yoeD.1.5803.seq
# -bsequence dna-align/BL01994.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03049___yoeD-BL01994.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03049___yoeD-BL01994.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03049___yoeD
# 2: BL01994
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity: 164/238 (68.9%)
# Similarity: 164/238 (68.9%)
# Gaps: 14/238 ( 5.9%)
# Score: 506.5
#
#
#=======================================
BSNT_03049___ 1 ATGTATTTAACGATTGAAGAAACAGCAGAATATACAAATCTTTCAGAGGA 50
|||||.||.|||||..|.|||||.|||||||||..||..||||||||.|.
BL01994 1 ATGTACTTGACGATAAAGGAAACCGCAGAATATTTAACGCTTTCAGAAGC 50
BSNT_03049___ 51 TTATATT-AAAAGCTTGGTGCTC---GAAGGGAAAATCAGAGCCGTTCAT 96
.|||.|| ||.|||||| || |||..|||||||.|..||||...|
BL01994 51 ATATGTTGAACAGCTTG----TCAGAGAAAAGAAAATCCGCACCGTCTTT 96
BSNT_03049___ 97 GACGGGGAGCAATTTTTGATTTATAAGGAACAGTTCAAAACGCATCTCGA 146
|||||..||||...|||.||..|.||.||.||.|||||.|||||..|.||
BL01994 97 GACGGACAGCAGCATTTAATCAACAAAGAGCAATTCAATACGCACATGGA 146
BSNT_03049___ 147 ACAGCTGGAGAATTACAAAGCACTGGTGCAGGAA---ATATTAAATGAAC 193
||||.||||.||.||.|||| |.||| || |||| .|..|.||.||.|
BL01994 147 ACAGATGGAAAAGTATAAAG-AGTGG-GC-GGAATCCGTTCTGAACGAGC 193
BSNT_03049___ 194 CGATCCCGGAAGATATTGATGTAAAGGATGAGGATTAG 231
|.|||||.||||||...||.||.||.|||||.|||||.
BL01994 194 CCATCCCCGAAGATCCGGACGTCAAAGATGAAGATTAA 231
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