Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03014 and BL01992
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:42
# Commandline: needle
# -asequence dna-align/BSNT_03014.1.5803.seq
# -bsequence dna-align/BL01992___yngE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03014-BL01992___yngE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03014-BL01992___yngE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03014
# 2: BL01992___yngE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1571
# Identity: 1165/1571 (74.2%)
# Similarity: 1165/1571 (74.2%)
# Gaps: 82/1571 ( 5.2%)
# Score: 4282.5
#
#
#=======================================
BSNT_03014 1 ATGGATTAT-------GAAAAGGA-----ACGAACAGAACGGGCTGAACG 38
|| |||||||| |.||||..|.|.| .||
BL01992___yng 1 -------ATGCCGGCCGAAAAGGAATTGTATGAACGCATCCG-----CCG 38
BSNT_03014 39 GATTCGAAAAGGCGGAGCGGAAAAGTATCATCAAGGCAATCGGGAAAAAG 88
|||||...|.|||||.|||||.||.||.|||.|||..|||..|.||||||
BL01992___yng 39 GATTCAGGAGGGCGGCGCGGAGAAATACCATGAAGCTAATAAGAAAAAAG 88
BSNT_03014 89 GCAAGCTCTTTGTCAGAGAGCGGCTTTCCCTTCTCTTTGACG-ATGACAT 137
|.||..|.|||||||||||.||..|....||.||..|||||| |.||| |
BL01992___yng 89 GGAAATTATTTGTCAGAGACCGATTAAAGCTGCTGCTTGACGAAGGAC-T 137
BSNT_03014 138 TGAGCTAGAAGACGCTTTTTTTGCGGAATGTATGTCAGACGGGCTTCCCG 187
.||.|||||.|||||.||||||||..|.||.|||.|.||||||||.||.|
BL01992___yng 138 CGACCTAGAGGACGCGTTTTTTGCCAATTGCATGGCTGACGGGCTACCGG 187
BSNT_03014 188 CTGACGGAGTTGTAACCGGTATCGGCAAAATCGGCGGCCAAACTGTTTGC 237
|.||.|||||.||.||.||.|||||.|||||||||||.|.|||.||||||
BL01992___yng 188 CAGATGGAGTCGTCACTGGAATCGGAAAAATCGGCGGGCGAACCGTTTGC 237
BSNT_03014 238 GTCATGGCGAATGATTCAACAGTGAAAGCGGGGTCATGGGGAGCTAAAAC 287
||||||||.|||||||||||.||.|||||.||.|||||||||||.|.|||
BL01992___yng 238 GTCATGGCCAATGATTCAACTGTCAAAGCAGGATCATGGGGAGCGAGAAC 287
BSNT_03014 288 AGTTGAAAAAATCATCAGAATTCAAGAAACCGCGGAAAAATTAAACTGTC 337
.|||||||||||||||.|.||.||.|||||.||.||||||.|.||.||.|
BL01992___yng 288 CGTTGAAAAAATCATCCGCATCCAGGAAACAGCCGAAAAACTGAATTGCC 337
BSNT_03014 338 CGCTCATTTATTTAGTCGATTCGGCAGGCGCCCGAATTACCGACCAAATC 387
||||..|||||||.|||||||||||||||||..|.|||||.||.|||.|.
BL01992___yng 338 CGCTTCTTTATTTGGTCGATTCGGCAGGCGCAAGGATTACGGATCAAGTT 387
BSNT_03014 388 AATGTCTTTCCAGGGAGACGCGGTGCAGGAAGAATTTTTTACAATCAAGT 437
.|..|.|||||.|||.||.|.||.||.||..|.||||||||..|.|||||
BL01992___yng 388 GACATGTTTCCGGGGCGAAGAGGAGCGGGGCGGATTTTTTATCAGCAAGT 437
BSNT_03014 438 CAAATTATCGGGACGCATTCCGCAAATCTGTCTGCTT-TTCGGACCATCT 486
|||||||||.||.|||||.|||||||||||||| ||| |||||.||.||.
BL01992___yng 438 CAAATTATCCGGGCGCATCCCGCAAATCTGTCT-CTTGTTCGGGCCTTCA 486
BSNT_03014 487 GCGGCAGGTGGCGCTTATATTCCGGCCTTCTGTGATATCGTCGTTATGGT 536
||||||||.|||||.||.||.|||||.||.||.||.||||||.|||||||
BL01992___yng 487 GCGGCAGGAGGCGCCTACATACCGGCTTTTTGCGACATCGTCATTATGGT 536
BSNT_03014 537 AGACGGTAACGCCTCCATGTATTTAGGCTCGCCAAGGATGGCGGAAATGG 586
.||.|||||||||||.|||||||||||||||||..|.|||||||||||||
BL01992___yng 537 CGAAGGTAACGCCTCGATGTATTTAGGCTCGCCGCGCATGGCGGAAATGG 586
BSNT_03014 587 TTATTGGAGAAAAAGTGTCTCTTGAAGAAATGGGTGGCGCCCGTATGCAT 636
|.||.||.||||||||.||.||||||||||||||.|||||..|.|||||.
BL01992___yng 587 TGATCGGCGAAAAAGTATCGCTTGAAGAAATGGGCGGCGCGAGAATGCAC 636
BSNT_03014 637 TGCTCAATCTCCGGCTGCGGAGATATTCTTGCAGAAACTGAAGAAGAAGC 686
||.||..|.||.|||||||||||.||||||||.||.||.||||||||.||
BL01992___yng 637 TGTTCTGTTTCAGGCTGCGGAGACATTCTTGCCGACACGGAAGAAGATGC 686
BSNT_03014 687 CATACAGCTGGCGCG--GGCTTATTTGTCTTACTTTCCGGCAAATTTTCA 734
.||..||..|||||| || |||.|.||.|||||||||.|.|| .|.||
BL01992___yng 687 GATCAAGTCGGCGCGCCGG--TATCTTTCCTACTTTCCGTCGAA-CTACA 733
BSNT_03014 735 -AGAAAAAGCGCC---CATTCATGAGAAA--CGCCCGCCAAAACACTTCA 778
.||||||||||| ||||.|.|..||| ||||||
BL01992___yng 734 CCGAAAAAGCGCCTGTCATTGAAGCAAAATCCGCCCG------------- 770
BSNT_03014 779 AAACTCCGCTTGCC------------GACGTCATTCCGCAAAATCAAAAC 816
||||.|||.| |||.||||||||.||||.||||||
BL01992___yng 771 ----TCCGTTTGACCGGTCATTGGAGGACATCATTCCGAAAAACCAAAAC 816
BSNT_03014 817 GCACCTTTTGATATGCATGAGCTGATT-----GAGCGGGTCATAGATGAA 861
||.||.|||.|.||| ||| |||| ||.|||.||||.||||||
BL01992___yng 817 GCTCCGTTTCAGATG-ATG----GATTTAATCGATCGGATCATTGATGAA 861
BSNT_03014 862 GACTCATTTTTTGAGATCAAAGCCTTATTTGCACCGGA-ATTATTGACGG 910
|..||.||||.||||||||||...||.||.||.||.|| .|.||| ||.|
BL01992___yng 862 GCGTCTTTTTATGAGATCAAAAAATTGTTCGCGCCAGAGCTGATT-ACCG 910
BSNT_03014 911 GCCTCGCACGAATCCACGGACAGCCTGTCGGCATTGTTGCAAACCAGCCG 960
|..|.|||.|.||.|||||.||||||||||||||..||||.||.||||||
BL01992___yng 911 GTTTGGCAAGGATTCACGGGCAGCCTGTCGGCATCATTGCCAATCAGCCG 960
BSNT_03014 961 AAGGTAAAAGGAGGCGTCTTATTCCACGATTCAGCAGACAAAGCGGCTAA 1010
..|||.|||||.||.||.||.|||||||||||.||||||||.||.||.||
BL01992___yng 961 CGGGTCAAAGGCGGTGTTTTGTTCCACGATTCGGCAGACAAGGCCGCAAA 1010
BSNT_03014 1011 GTTTATTACCTTATGTGACGCTTTTCATATCCCATTGCTGTTCTTAGCCG 1060
||||||.|..||.|||||.||.|.|||||||||..|||||||..|.||.|
BL01992___yng 1011 GTTTATCAATTTGTGTGATGCCTATCATATCCCGCTGCTGTTTCTGGCTG 1060
BSNT_03014 1061 ATATCCCCGGTTTTATGATTGGCACAAAAGTAGAACAGGCTGGGATTATC 1110
|.|||||||||||||||||.||.||.|||||.||...|||.||.||.|||
BL01992___yng 1061 ACATCCCCGGTTTTATGATCGGAACGAAAGTCGAGAGGGCGGGTATCATC 1110
BSNT_03014 1111 AGACACGGAGCGAAAATGATTTCTGCGATGTCAGAGGCAACTGTTCCAAA 1160
||||||||.||||||||||||||.||||||.|.||.|||||.||.||.||
BL01992___yng 1111 AGACACGGTGCGAAAATGATTTCAGCGATGGCCGAAGCAACCGTACCGAA 1160
BSNT_03014 1161 ACTCTCTGTCATTGTCCGAAAAGCTTACGGGGCGGGGTTGTATGCAATGG 1210
|.|.||.|||||.|||.|.||||||||.||.||.||.||||||||.||||
BL01992___yng 1161 AATATCCGTCATCGTCAGGAAAGCTTATGGTGCAGGCTTGTATGCGATGG 1210
BSNT_03014 1211 CAGGGCCGGCATTTGAACCGGATTGCTGTCTAGCGCTCCCAACCGCCCAA 1260
|.||.|||||.||||||||.||.||||||||.|||||.||.||.||.|||
BL01992___yng 1211 CCGGTCCGGCCTTTGAACCTGACTGCTGTCTGGCGCTGCCGACGGCGCAA 1260
BSNT_03014 1261 ATCGCCGTCATGGGCCCTGAGGCAGCTGTAAACGCTGTCTACGCTAAAAA 1310
||.||||||||||||||.||.|||||.|||||.||.||.|||||||||||
BL01992___yng 1261 ATTGCCGTCATGGGCCCGGAAGCAGCGGTAAATGCCGTTTACGCTAAAAA 1310
BSNT_03014 1311 AATCGCCGAGCTGCCAGAAGAAGAGAGAGCCGCATTTATCAGCAG-CAAA 1359
||||||.||..||||.||||||||..|..|||||||.||| ||.| .|||
BL01992___yng 1311 AATCGCAGAATTGCCTGAAGAAGAACGGTCCGCATTCATC-GCCGAAAAA 1359
BSNT_03014 1360 CGGGAGGAATACAAAGAGGACATCAATATCTACCGTCTGGCTTCAGAAAT 1409
|||.|.||.|||.||.|.|||||..|.||.|||||.||.|||||||||||
BL01992___yng 1360 CGGAAAGAGTACCAAAAAGACATAGACATTTACCGGCTTGCTTCAGAAAT 1409
BSNT_03014 1410 GATCATTGATGCTGTTATCCCAGCCAATTCGCTGCGTGATGAGCTGGCCA 1459
|||..|.||.|...|.||.||.|||.|.||||||||....||.||...||
BL01992___yng 1410 GATTGTCGACGGGATCATTCCGGCCGACTCGCTGCGAACGGAACTCATCA 1459
BSNT_03014 1460 AACGGCTCAAGGCATACATGACAAAGGAAATGACATTTACCAATCGAAAG 1509
|||||||.||.|||||.|||||.||..|.|||||||||||..|.||.|||
BL01992___yng 1460 AACGGCTGAATGCATATATGACCAAATACATGACATTTACGGAACGGAAG 1509
BSNT_03014 1510 CATCCGGTTTATCCGGTGTAA 1530
|||||.||||||||.||.|||
BL01992___yng 1510 CATCCTGTTTATCCCGTCTAA 1530
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