Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03058 and BL01983
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence dna-align/BSNT_03058.1.5803.seq
# -bsequence dna-align/BL01983___proJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03058-BL01983___proJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03058-BL01983___proJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03058
# 2: BL01983___proJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1184
# Identity: 503/1184 (42.5%)
# Similarity: 503/1184 (42.5%)
# Gaps: 499/1184 (42.1%)
# Score: 1424.5
#
#
#=======================================
BSNT_03058 0 -------------------------------------------------- 0
BL01983___pro 1 ATGACCTCTAATCAACAGAGGGTAGTTGTCAAAGTGGGAAGCAGTTCTTT 50
BSNT_03058 0 -------------------------------------------------- 0
BL01983___pro 51 AACAAGTCTTCACGGCGAAATCAGCAGCAAAAAGCTCGAAAAGCTCGTTG 100
BSNT_03058 0 -------------------------------------------------- 0
BL01983___pro 101 AGCAGATTGTCCGCCTCAAAGATGAAGGACACGAAGTCCTCCTTGTTTCA 150
BSNT_03058 0 -------------------------------------------------- 0
BL01983___pro 151 TCTGGCGCTGTAGCAGCCGGTTACCGGAAGCTCGGCTTTATCAACAGGCC 200
BSNT_03058 0 -------------------------------------------------- 0
BL01983___pro 201 GGATACATTGCCTGAAAAACAAGCATCCGCTTCTGTCGGCCAAGGCTTAT 250
BSNT_03058 0 -------------------------------------------------- 0
BL01983___pro 251 TAATCGAAGCGTATTCCAAGCTTTTTTTATCCCACGGCTATATCGCTTCA 300
BSNT_03058 0 -------------------------------------------------- 0
BL01983___pro 301 CAAATTTTAATCACAAAAAGCGATTTTTCAGATGAAAAACGGTACAACAA 350
BSNT_03058 1 -------------ATGAATGTACTGCTCGAGCGCGGCATCATCCCGATCA 37
|||||.||.|||||..|.||||||||.||.|||||||
BL01983___pro 351 TGTGAGAAATACGATGAACGTGCTGCTGAAACGCGGCATTATTCCGATCA 400
BSNT_03058 38 TAAACGAAAATGACACAGTTACCGTCAATCGGCTCAAGTTTGGCGACAAT 87
|.|||||||||||.||.||||||||||||||||||||.||.||.||||||
BL01983___pro 401 TCAACGAAAATGATACGGTTACCGTCAATCGGCTCAAATTCGGAGACAAT 450
BSNT_03058 88 GATACACTCGCGGCAAAAGTCGCAGGATTGATTGATGCAGATATGCTTGT 137
||.||.||..|.||.|||||.||.||..||||.||.||.||..||||...
BL01983___pro 451 GACACGCTTTCTGCTAAAGTGGCGGGTCTGATCGACGCCGACCTGCTGAC 500
BSNT_03058 138 GATTTTATCAGATATAGACGGATTATATGACGGCAATCCGCGCACAAATC 187
.||..|.||.|||||||||||..|.|||||||..||||||||.|.||..|
BL01983___pro 501 CATCCTCTCTGATATAGACGGCCTTTATGACGCGAATCCGCGAAAAACGC 550
BSNT_03058 188 CAGAAGCGAAAAGGA----TACAGCGGGTGAGTGAAATAACACCTGACAT 233
|.||.|| .|.| |.|||...||.|.||||||.||.||.||.||
BL01983___pro 551 CGGACGC----CGCACTCGTCCAGGAAGTAACTGAAATCACGCCGGAAAT 596
BSNT_03058 234 CGAAGCATGCGCAGGTGACACTGGAAGCATCGTTGGCACCGGCGGCATGC 283
.|||||.|..|||||.||..|.||||||...||.||.||||||||||||.
BL01983___pro 597 AGAAGCTTCAGCAGGGGATGCAGGAAGCGAAGTCGGAACCGGCGGCATGA 646
BSNT_03058 284 GCTCTAAGCTTGATGCGTTTAAAATCGTAATGGCGTCTGGCATTAAAGGT 333
..||.||.||.||.||.||||||||...||||||.||.|||||.|||||.
BL01983___pro 647 AGTCCAAACTGGACGCTTTTAAAATTACAATGGCTTCAGGCATCAAAGGG 696
BSNT_03058 334 TTCCTTGGTCAGGCAGATGCCGGCGATATTTTATATCACG--CCGTTCAT 381
||..|.||.|..||.||..||..||..||||| .|||| .||.||
BL01983___pro 697 TTTTTAGGGCGCGCGGACACCCCCGGCATTTT---GCACGAAGCGATC-- 741
BSNT_03058 382 GAACAGGCGGAA--------GGCACCTATTTTGAAGCAGAA---GGA--- 417
.||||.| ||.||.|||||| |..|.||| |||
BL01983___pro 742 -----TGCGGGACTGCGAGGGGAACGTATTTT-ATACCGAATGCGGATTC 785
BSNT_03058 418 --ACGCTTCCGTTGAATCAAAAGGAGAAATGGATCGCTTTTAATTCCGGC 465
|||| || |.||.||.||..||.|||||||.||.|||||.||.||.
BL01983___pro 786 ACACGC--CC--TCAACCATAAAAAGCAATGGATAGCATTTAACTCTGGA 831
BSNT_03058 466 CCGGAAGGTGAAAT------------------------GTTT-TTATCAG 490
||.|||||.||.|| |||| |||||
BL01983___pro 832 CCTGAAGGAGACATCGTCGTCCACAACGAAAGCAAAGAGTTTATTATC-- 879
BSNT_03058 491 ATGATTGTTCACGAAAAATAACAAACGGC------CAATCGAGTTTATAC 534
|| .||.||||.|| || |..||.|||.|.|||
BL01983___pro 880 --GA------CCGTAAAAAAA------GCCTGTATCCTTCTAGTATTTAC 915
BSNT_03058 535 CTGGACGGTGTACAGAAGATTAAGGGGAAATTCAAAAGTGGTTCAGTTGT 584
||| ||.||.||....||||..|..||.||.||.||
BL01983___pro 916 ---GAC------------ATCAACGGCCGTTTCAGCAACGGATCCGTCGT 950
BSNT_03058 585 TCGGCTGATGGATTCA--AAAGGGACGGAAATCGGCCTTGGAATCGTCAA 632
|||..|..|.|| ||| ||.|.|| ||||||||||||.||..|||||||
BL01983___pro 951 TCGAATCCTTGA-TCAGGAAGGAGA-GGAAATCGGCCTCGGCGTCGTCAA 998
BSNT_03058 633 ---TTACTCTTCTGTACAGCTTC--------AAGAACCGGAAAAGAAAAA 671
||.|||.|| .||||||| ||||| |||.|.|||..|
BL01983___pro 999 CTTTTCCTCATC---CCAGCTTCGTAAATGGAAGAA--GGATACGAATCA 1043
BSNT_03058 672 GGAA-------CTGACAAACAGAGCTCTAATTGATCA-AGAAGCATTTGT 713
|||| ||..|..|||| |||.|..|||| || ||||||.|||||
BL01983___pro 1044 GGAAACAGCCGCTTCCTCACAG-GCTGTCGTTGA-CAGAGAAGCGTTTGT 1091
BSNT_03058 714 TTGCCATGTGGATTTTTCTTTACCTGTAAATTAA 747
.||.|||.|.||..|.||..|.||..| ||||
BL01983___pro 1092 CTGTCATTTAGAGCTATCCGTTCCGCT---TTAA 1122
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