Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03054 and BL01973
See
Amino acid alignment /
Visit
BSNT_03054 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_03054___gltD.1.5803.seq
# -bsequence dna-align/BL01973___gltD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03054___gltD-BL01973___gltD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03054___gltD-BL01973___gltD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03054___gltD
# 2: BL01973___gltD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1499
# Identity: 1144/1499 (76.3%)
# Similarity: 1144/1499 (76.3%)
# Gaps: 34/1499 ( 2.3%)
# Score: 4295.5
#
#
#=======================================
BSNT_03054___ 1 ATGGGGAAACCAACTGGATTTATGGAGATCAAACGAGAAAAACCTGCGGA 50
|||||.|||.||||.|||||||||||..||||.||.|||||.|||||.||
BL01973___glt 1 ATGGGCAAAGCAACAGGATTTATGGAATTCAAGCGGGAAAAGCCTGCTGA 50
BSNT_03054___ 51 GCGGGACCCTCTCACTCGCTTAAAGGATTGGAAAGAATATTCTGCTCCTT 100
.||.||.||||||||.||..||||.||.|||||.||||||||..||||.|
BL01973___glt 51 ACGCGATCCTCTCACACGGATAAACGACTGGAACGAATATTCGTCTCCAT 100
BSNT_03054___ 101 TTTCAGAAGAAGCATCGAAACGGCAAGGGGCGCGGTGCATGGATTGCGGT 150
||||.||.||||||||.|||.|.||.||.|||||.||||||||.|||||.
BL01973___glt 101 TTTCTGAGGAAGCATCAAAAAGACAGGGAGCGCGCTGCATGGACTGCGGC 150
BSNT_03054___ 151 ACACCGTTTTGCCAGATCGGTGCGGACATTAACGGATTTACATCCGGCTG 200
||.||.||||||||.|||||...|||.||...|||.|.|||.||.||.||
BL01973___glt 151 ACCCCCTTTTGCCAAATCGGCATGGATATAGGCGGTTATACGTCAGGATG 200
BSNT_03054___ 201 TCCGATTTACAACTTAATTCCTGAATGGAATGATCTTGTCTACCGGGGCA 250
|||||||.||||.|||||.|||||||||||.||.||.||.|||..|||.|
BL01973___glt 201 TCCGATTCACAATTTAATCCCTGAATGGAACGACCTCGTTTACAAGGGAA 250
BSNT_03054___ 251 GATGGAAGGAAGCATTGGAACGCCTGTTGAAAACAAACAACTTTCCTGAA 300
|.|||||.|||||..|.||.|||||..|.||.||||||||.||.||||||
BL01973___glt 251 GGTGGAAAGAAGCGCTTGACCGCCTTCTAAAGACAAACAATTTCCCTGAA 300
BSNT_03054___ 301 TTCACAGGGCGGGTATGTCCCGCTCCTTGTGAAGGATCATGCACTTTAGC 350
|||||.||||||||.|||||.||.||||||||.||.||.||.||..|.||
BL01973___glt 301 TTCACTGGGCGGGTCTGTCCGGCGCCTTGTGAGGGCTCTTGTACGGTGGC 350
BSNT_03054___ 351 GATTTCAGACCCGGCCGTATCAATTAAAAACATCGAGCGGACCATTATCG 400
||||||.||.|||||||||||.||.|||...|||||.|||||.|||||.|
BL01973___glt 351 GATTTCCGATCCGGCCGTATCCATCAAAGGGATCGAACGGACGATTATTG 400
BSNT_03054___ 401 ATAAAGGATTTGAGAACGGCTGGATTCAACCTAGAATTCCAAAAAAACGA 450
|.|||||||||||.|||||.||||||||.||..|||||||.||||||||.
BL01973___glt 401 ACAAAGGATTTGAAAACGGATGGATTCAGCCGCGAATTCCGAAAAAACGG 450
BSNT_03054___ 451 ACAGGCAAAAAAGTTGCTATCGTCGGGTCGGGCCCAGCCGGACTGGCGAG 500
|..|||||.|||.|.||.||.|||||.||.||.||.|||||.||.||.||
BL01973___glt 451 AGCGGCAAGAAAATCGCGATAGTCGGCTCAGGGCCTGCCGGTCTTGCAAG 500
BSNT_03054___ 501 TGCTGACCAGCTGAATCAAGCGGGGCATTCTGTCACTGTTTTTGAGCGCT 550
.||.||.||..||||.||.|||||||||||.||||||||||.|||||||.
BL01973___glt 501 CGCCGATCAATTGAACCAGGCGGGGCATTCGGTCACTGTTTATGAGCGCA 550
BSNT_03054___ 551 CAGACAGAGCGGGCGGCCTTTTAACATACGGCATTCCAAACATGAAGCTT 600
..|||.|..||||.|||||.||||..||||||||.||.|.|||||||||.
BL01973___glt 551 GCGACCGCCCGGGAGGCCTGTTAATGTACGGCATCCCGAGCATGAAGCTC 600
BSNT_03054___ 601 GAGAAGGGCATTGTAGAACGCCGAATTAAATTGCTGACGCAAGAGGGAAT 650
||.||..||.||||.||||||||.||.|||.||.||||.||.||.||..|
BL01973___glt 601 GAAAAAAGCGTTGTCGAACGCCGCATCAAACTGTTGACACAGGAAGGCGT 650
BSNT_03054___ 651 TGATTTTGTCACGAACACAGAAATCGGTGTTGACATTACAGCTGATGAGC 700
.||.||||||||.||.||.||||||||....||.||||||||.||.||.|
BL01973___glt 651 CGACTTTGTCACCAATACGGAAATCGGCAAAGATATTACAGCCGACGAAC 700
BSNT_03054___ 701 TAAAGGAGCAATTTGATGCTGTGATCTTATGCACAGGCGCTCAAAAACAG 750
||||.||.||.|..|||||..|.|||.|.||||||||.||.|||||||||
BL01973___glt 701 TAAAAGAACAGTACGATGCGATTATCCTTTGCACAGGGGCCCAAAAACAG 750
BSNT_03054___ 751 CGGGACCTCTTAATTGAAGGACGCGACTCAAAAGGAGTCCATTACGCAAT 800
||.||.|||||.||||||||.||.||..|||||||.|||||.|..||.||
BL01973___glt 751 CGCGATCTCTTGATTGAAGGCCGTGAAGCAAAAGGTGTCCACTTTGCCAT 800
BSNT_03054___ 801 GGACTACCTCACACTTGCAACA--AAAAGCTAT-TTAGATTCTAATTTTA 847
||||||..|.||| .|||.|| |||||| || .|.|||||.|||||||
BL01973___glt 801 GGACTATTTAACA--GGCACCATTAAAAGC-ATGCTCGATTCGAATTTTA 847
BSNT_03054___ 848 AAGACAAGCAATTCATTGATGCCAAAGGGAAAGATGTCATCGTAATCGGA 897
||||.|||||.||.||..||.|.|||...|||||.||||||||.|||||.
BL01973___glt 848 AAGATAAGCAGTTTATCAATACGAAAAATAAAGACGTCATCGTCATCGGC 897
BSNT_03054___ 898 GGCGGAGATACAGGAGCTGACTGTGTGGCTACCGCTCTGCGTCAAAAAGC 947
|||||.||.||.||.||.|||||.||.||.||.||.|||||.||||||||
BL01973___glt 898 GGCGGTGACACGGGGGCAGACTGCGTTGCAACGGCCCTGCGCCAAAAAGC 947
BSNT_03054___ 948 CAAAAGCGTGCACCAATTCGGCAAACACCCGAAACTTCCGCCA------G 991
...||||||...||||||||||||.||.|||||.||.|| |.| |
BL01973___glt 948 GCGAAGCGTCGTCCAATTCGGCAAGCATCCGAAGCTGCC-CGATACAAGG 996
BSNT_03054___ 992 CCCGCACGAATGACAATATGTGGCCTGAACAGCCACACGTCTTTACGCTT 1041
.|||| |||| |||||||||||.||||||||.||.|||..||||||.
BL01973___glt 997 ACCGC-CGAA----AATATGTGGCCGGAACAGCCGCATGTCCATACGCTG 1041
BSNT_03054___ 1042 GAATATGCATACGAGGAAGCAGAAGCAAAATTCGGAAGAGATCCGAGAGA 1091
||.|||||.||.||.||.||..|||||..||||||||..|||||||||.|
BL01973___glt 1042 GACTATGCCTATGAAGAGGCGCAAGCAGTATTCGGAAACGATCCGAGACA 1091
BSNT_03054___ 1092 ATACTCCATTCAAACGACAAAAATGGTCGCGGATAAAAACGGAAAGCTGA 1141
|||.||.||.|||||.|.|||..|.|||||.|||||||||||..|..|||
BL01973___glt 1092 ATATTCGATCCAAACAAAAAAGCTTGTCGCAGATAAAAACGGCCATTTGA 1141
BSNT_03054___ 1142 AAGAGCTTCATACCATCCAAATGGAAAAAGTGAAAAATGAGCATGGAAAA 1191
||||.||.|||||.||.||||||.|||||||.||.|||||.||.||.|||
BL01973___glt 1142 AAGAACTGCATACGATTCAAATGAAAAAAGTAAAGAATGATCAAGGGAAA 1191
BSNT_03054___ 1192 TACGAGTTCCGCGAGCTGCCTGGAACGGAAAAAGTATGGCCTGCTCAGCT 1241
|..|||||||.|||..|.||.||||||||||||||||||||||||||...
BL01973___glt 1192 TTTGAGTTCCACGAAATTCCGGGAACGGAAAAAGTATGGCCTGCTCAATA 1241
BSNT_03054___ 1242 TGTCTTTATCGCTATCGGCTTTGAAGGCACAGAACAGCCGCTG-TTGAAA 1290
.|||||||||||.||||||||||||||.||.|||||||||||| ||| |.
BL01973___glt 1242 CGTCTTTATCGCCATCGGCTTTGAAGGAACGGAACAGCCGCTGCTTG-AG 1290
BSNT_03054___ 1291 CAGTTTGGTGTTGATTCTGT---AAATAACAAAATCAGT----GCAGCAT 1333
|||||.||.||..||.|.|| |||||| ||| |||||||
BL01973___glt 1291 CAGTTCGGGGTAAATACGGTGAGAAATAA-------AGTTGACGCAGCAT 1333
BSNT_03054___ 1334 ATGGGGATTATCAAACAAATATCGATGGTGTATTCGCCGCAGGGGATGCA 1383
|.|||||.|.|.||||||||.|||||||.||.|||||.|||||||||||.
BL01973___glt 1334 ACGGGGAATTTAAAACAAATGTCGATGGAGTCTTCGCAGCAGGGGATGCG 1383
BSNT_03054___ 1384 AGAAGAGGCCAAAGCTTAATCGTATGGGCGATTAATGAAGGCCGTGAAGT 1433
||||||||.||||||.|.|||||.|||||||||.|.||.||.||.|||||
BL01973___glt 1384 AGAAGAGGACAAAGCCTGATCGTTTGGGCGATTCACGAGGGACGCGAAGT 1433
BSNT_03054___ 1434 GGCGCGTGAAGTGGATCGATATTTGATGGGGAGTTCAGTTCTTCCGTAA 1482
.||.||||||||.||...||||||.||||||||.||.||.||.||.|||
BL01973___glt 1434 CGCCCGTGAAGTTGACAAATATTTAATGGGGAGCTCTGTACTGCCTTAA 1482
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.