Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03549 and BL01964
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence dna-align/BSNT_03549___zwf.1.5803.seq
# -bsequence dna-align/BL01964___zwf.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03549___zwf-BL01964___zwf.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03549___zwf-BL01964___zwf.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03549___zwf
# 2: BL01964___zwf
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1496
# Identity: 1127/1496 (75.3%)
# Similarity: 1127/1496 (75.3%)
# Gaps: 43/1496 ( 2.9%)
# Score: 4176.5
#
#
#=======================================
BSNT_03549___ 1 GTGAAAACAAACCAA---CAACCAAAAGCAGTAATTGTCATATTCGGTGC 47
.||||||.|.|.||| .|||||||||||||.||.||.|||||.||.||
BL01964___zwf 1 TTGAAAAAAGATCAAATGGAACCAAAAGCAGTTATCGTAATATTTGGCGC 50
BSNT_03549___ 48 AACTGGAGATTTAGCAAAACGAAAATTGTATCCGTCTATTCACCGTTTAT 97
|||.||.|||||.||||||||||||.|.|||||.|||||.|||.|..|.|
BL01964___zwf 51 AACAGGGGATTTGGCAAAACGAAAACTATATCCTTCTATCCACAGGCTCT 100
BSNT_03549___ 98 ATCAAAACGGACAAATCGGAGAA-GAGTTTGCAGTGGTAGGAGTTGGAAG 146
|..|||||||||||||||| ||| ||.||.||.||.||.|||||.||.||
BL01964___zwf 101 ACGAAAACGGACAAATCGG-GAATGAATTCGCGGTTGTCGGAGTCGGCAG 149
BSNT_03549___ 147 AAGACCTTGGTCTAATGAGGATCTTCGC------------CAAACTGTTA 184
|.|.||||||.|.|||||.||..||||| |||.|.|||
BL01964___zwf 150 ACGCCCTTGGACAAATGAAGACTTTCGCAGTACCGTACAGCAATCGGTT- 198
BSNT_03549___ 185 AAACATCCA--TTTCC--TCATCTGCAGATAAGCATATAGATGATTTCAC 230
||.| ||||| |.|.| ||.|||.||.|.||.||.||.||
BL01964___zwf 199 -----TCGAAGTTTCCGTTAAAC----GAAAAGGATGTGGACGAGTTTAC 239
BSNT_03549___ 231 GTCTCATTTTTACTATCACCCGTTTGACGTGACAAACCCTGGTTCTTATC 280
.|||||.||.||||||||.||.|||||.||.|||||..|.||.||.||.|
BL01964___zwf 240 ATCTCACTTCTACTATCATCCTTTTGATGTTACAAATTCCGGCTCATACC 289
BSNT_03549___ 281 AAGAGCTAAACGTATTGCTTA---ACCAGCTGGAAGATACATATCAAATT 327
..||..||||||.| |||| |..||||||||..|||||||.|.|||
BL01964___zwf 290 GGGAATTAAACGAA---CTTATAGAGAAGCTGGAAAGTACATATGATATT 336
BSNT_03549___ 328 CCTAACAACAGAATGTTCTACTTGGCAATGGCTCCTGAATTCTTCGGAAC 377
||.||.|||.|.|||||.|||||.||.||||||||||||||.||||||||
BL01964___zwf 337 CCGAATAACCGGATGTTTTACTTAGCGATGGCTCCTGAATTTTTCGGAAC 386
BSNT_03549___ 378 GATTGCAAAAACATTAAAATCAGAGGGTGTAACAGCTACAACCGGCTGGT 427
|||||||||.....||||||||||||||||.||..|.|||||.|||||||
BL01964___zwf 387 GATTGCAAAGTTCCTAAAATCAGAGGGTGTCACTTCAACAACAGGCTGGT 436
BSNT_03549___ 428 CCCGCCTTGTCATCGAAAAACCATTCGGCCATGATCTGCCAAGCGCACAG 477
|..|.||.||.||||||||.||.|||||.|||||||||||.||||||.|.
BL01964___zwf 437 CAAGGCTCGTTATCGAAAAGCCTTTCGGGCATGATCTGCCGAGCGCAAAA 486
BSNT_03549___ 478 GCATTAAATAAAGAAATCCGCGAAGCATTTACGGAAGATCAAATTTACAG 527
||.||.||..|.||||||||.|||||.|||||.||||||||||||||..|
BL01964___zwf 487 GCCTTGAACCAGGAAATCCGTGAAGCTTTTACAGAAGATCAAATTTATCG 536
BSNT_03549___ 528 AATCGACCATTATCTAGGCAAACAAATGGTTCAGAACATTGAAGTGATTC 577
.||.||||||||||||||.||.||||||||.||||||||.|||||.||.|
BL01964___zwf 537 GATTGACCATTATCTAGGAAAGCAAATGGTGCAGAACATCGAAGTCATCC 586
BSNT_03549___ 578 GATTTGCCAATGCGATTTTCGAACCGCTTTGGACAAACCGCTACATTTCA 627
|.||||||||.||||||||.||.|||||||||||||||.|.|||||.||.
BL01964___zwf 587 GCTTTGCCAACGCGATTTTTGAGCCGCTTTGGACAAACAGATACATCTCG 636
BSNT_03549___ 628 AACATTCAAATCACATCTAGCGAATCACTAGGCGTTGAAGACCGCGCAAG 677
|||||||||||.||.||.||.|||....|.||.||.||||||.|.||.||
BL01964___zwf 637 AACATTCAAATTACGTCAAGTGAAGATTTGGGTGTGGAAGACAGAGCGAG 686
BSNT_03549___ 678 ATATTACGAAAAATCAGGCGCCCTTCGCGACATGGTGCAAAACCATATTA 727
||||||.||||||||.||.||.|||.|.|||||||||||||||||.|||.
BL01964___zwf 687 ATATTATGAAAAATCGGGTGCGCTTAGAGACATGGTGCAAAACCACATTC 736
BSNT_03549___ 728 TGCAGATGGTTGCCCTTCTTGCAATGGAGCCGCCTATCAAATTGAACACA 777
|.||.|||||.||.||.|||||.|||||.|||||.|||||..|||||||.
BL01964___zwf 737 TTCAAATGGTGGCGCTGCTTGCGATGGAACCGCCGATCAAGCTGAACACG 786
BSNT_03549___ 778 GAAGAAATCCGCAGCGAAAAAGTGAAGGTGCTGAGAGCACTGCGTCCTAT 827
|||||.|||||||||||||||||||||||.||.|||||.||.|||||.||
BL01964___zwf 787 GAAGAGATCCGCAGCGAAAAAGTGAAGGTTCTCAGAGCCCTTCGTCCGAT 836
BSNT_03549___ 828 TGCAAAAGACGAAGTGGATGAATACTTTGTGCGCGGACAATATCAAGCTG 877
|..|||||||||.||.||..|||..|||||||||||.||.|||.|.||.|
BL01964___zwf 837 TCAAAAAGACGATGTCGACCAATTTTTTGTGCGCGGCCAGTATGACGCAG 886
BSNT_03549___ 878 GTGAAATTGACGGTGTACCGGTTCCTGCTTATACAGATGAAGATAATGTC 927
|.|...|.||||....||..|||||.||||||...|||||..|.||.||.
BL01964___zwf 887 GAGTCGTCGACGAAAAACATGTTCCGGCTTATCGCGATGAGCAAAACGTA 936
BSNT_03549___ 928 GCTCCTGACTCCAATACAGAAACCTTTGTTGCCGGCAAGCTCCTGATCGA 977
||....||.||.|||||.|||||.||.|||||||||||.||.||||||||
BL01964___zwf 937 GCAAAAGATTCGAATACGGAAACGTTCGTTGCCGGCAAACTGCTGATCGA 986
BSNT_03549___ 978 CAACTTCAGATGGGCTGGTGTTCCATTCTACATCAGAACCGGAAAACGAA 1027
|||||||||||||||.|||||.||.|||||||||.|.||.||.|||||.|
BL01964___zwf 987 CAACTTCAGATGGGCCGGTGTGCCGTTCTACATCCGGACAGGCAAACGGA 1036
BSNT_03549___ 1028 TGAAAGAAAAGTCCACAAAAATTGTCGTTCAATTTAAGGACATTCCGATG 1077
||.|..||||.||.||..|.||||||||.||||||||.||||||||||||
BL01964___zwf 1037 TGCAGAAAAAATCAACGCAGATTGTCGTCCAATTTAAAGACATTCCGATG 1086
BSNT_03549___ 1078 AACCTGTACTACGGTAATGAAAACAACATGAATCCGAACTTGCTTGTCAT 1127
||.||.||.|||||.||.|..||||..|||.|.||.||..||||.||.||
BL01964___zwf 1087 AATCTTTATTACGGAAACGGCAACACGATGCACCCTAATCTGCTGGTGAT 1136
BSNT_03549___ 1128 TCATATTCAGCCTGACGAAGGCATTACGCTTTACTTAAATGCTAAAAAGC 1177
||||||||||||.||.||||||||.||.|||.|.|||||.||.|..||||
BL01964___zwf 1137 TCATATTCAGCCGGATGAAGGCATCACCCTTCATTTAAACGCAAGGAAGC 1186
BSNT_03549___ 1178 TTGGCGGAGCAGCAC--ACGCACAGCCAATCAAACTCGATTATTGCAGCA 1225
||||.| ||.|||| ..||.|||||.|||||.|||||.||.|||...|
BL01964___zwf 1187 TTGGAG--GCGGCACTTTTGCCCAGCCGATCAAGCTCGACTACTGCCATA 1234
BSNT_03549___ 1226 ATTGCAATGACGAGTTGAACACCCCTGAAGCATATGAAAAACTCATTCAC 1275
|.|||...||||...|.|||||.||||||||.||||||||.||.|||...
BL01964___zwf 1235 ACTGCGGGGACGGCATCAACACGCCTGAAGCTTATGAAAAGCTGATTTTG 1284
BSNT_03549___ 1276 GACTGTCTT-CTTGGCGATGCAACAAACTTTGCACACTGGGATGAAGTTG 1324
||||| ||| |..||.||.||.|||||||||||.||||||||||||||||
BL01964___zwf 1285 GACTG-CTTGCACGGAGACGCGACAAACTTTGCCCACTGGGATGAAGTTG 1333
BSNT_03549___ 1325 CCCTTTCTTGGAGCTTTGTCGACTCTATTTCTGAAACATGGGCAGCAAAC 1374
|.|||||.|||||.|||||.||..|.||||||.|||..||||..|.||||
BL01964___zwf 1334 CGCTTTCCTGGAGTTTTGTTGATGCGATTTCTCAAAACTGGGAGGAAAAC 1383
BSNT_03549___ 1375 AAAACCTTATCTCCTAACTACGAATCAGGCTCAATGGGACCGAAAGTATC 1424
||||||.|.||.||||||||..|..|.|||||.|||||.|||||||..||
BL01964___zwf 1384 AAAACCCTTTCCCCTAACTATAAGGCGGGCTCCATGGGGCCGAAAGCTTC 1433
BSNT_03549___ 1425 TGATGATCTTTTGGCGAAAGACGGCTTACACTGGTGGAATATATAA 1470
|||.||.||..|.||.|||||||||||.||.||||||....|.|||
BL01964___zwf 1434 TGACGACCTGCTCGCAAAAGACGGCTTTCATTGGTGGCCGCTTTAA 1479
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