Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03042 and BL01957
See
Amino acid alignment /
Visit
BSNT_03042 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_03042___yoeB.1.5803.seq
# -bsequence dna-align/BL01957___yoeB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03042___yoeB-BL01957___yoeB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03042___yoeB-BL01957___yoeB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03042___yoeB
# 2: BL01957___yoeB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 601
# Identity: 385/601 (64.1%)
# Similarity: 385/601 (64.1%)
# Gaps: 107/601 (17.8%)
# Score: 1141.0
#
#
#=======================================
BSNT_03042___ 1 ATGAAAAAAT--GTCTTCTATTTCTAACAACCATT-GCACTTATTCTG-T 46
.|||||||.| .||.|.|.||| ||| ||..||.|.||| |
BL01957___yoe 1 TTGAAAAAGTTAATCGTTTGTTT---------ATTAGCTGTTTTACTGAT 41
BSNT_03042___ 47 CATT--------AAGCACAAAT-----GCATTTGCGAAAAAT---ACATC 80
| || .||| .| ||| ||||||||| |||||
BL01957___yoe 42 C-TTGCCTGCCGGAGC----GTCCCTCGCA---GCGAAAAATCAAACATC 83
BSNT_03042___ 81 AGGCGATTTATCACAAAAACAAGCATTACAGT--TGGCATTATCC----- 123
|||..||||| |.|||.||||| ||| ||..||||.||
BL01957___yoe 84 AGGGAATTTA----ACAAATAAGCA----AGTCATGCAATTAACCTTGCA 125
BSNT_03042___ 124 -GCTAGAGAACATTTTTGGAACACCATGAGCGGCCACAATCCGAAGGTGA 172
||..|.||.||.||||||||.||.|||||||||||||||||.||.|.||
BL01957___yoe 126 GGCACGGGAGCACTTTTGGAATACGATGAGCGGCCACAATCCAAAAGCGA 175
BSNT_03042___ 173 AAAAAGCAGTTTGCCCATCAGGCACATTCGAGTATCAAAATCTTCAATAT 222
||||..||..|||||||||....|||||.||.||.|....|||||.||||
BL01957___yoe 176 AAAACTCAACTTGCCCATCCAAAACATTTGAATACCGCGGTCTTCCATAT 225
BSNT_03042___ 223 --GTATACATGTGCAGTGATCTAGGCACTAAAGCAAAAGCGGTGA----A 266
|||| |||||||||||..|..||||.||||||||| |.| |
BL01957___yoe 226 ACGTAT--ATGTGCAGTGAATTCAGCACAAAAGCAAAA----TTAACAGA 269
BSNT_03042___ 267 TTATTTAACTCCTATTTTTACAAAA-ACAGCAATCGAAAAAGGCTTTAAA 315
.||.||.||.||..||||.|||||| || ||.||..||||||||||..||
BL01957___yoe 270 CTACTTGACGCCGGTTTTCACAAAAGAC-GCCATTAAAAAAGGCTTGGAA 318
BSNT_03042___ 316 GATT-----ATCATTTCACTGTTTCAAAAGGAAAGCTTGCTGTTCCAATC 360
.|.| |||||||| ||..||||||||..|.||.||.||..||
BL01957___yoe 319 AAATACAACATCATTTC-----TTATAAAGGAAAAATGGCCGTGCCTGTC 363
BSNT_03042___ 361 GGTGACGGAGACAATCT-TTTGAATTGGA------AAAAATCAACTGCTA 403
||.||.||.|||||.|| ||.|.||.||| ||||||| |
BL01957___yoe 364 GGCGATGGGGACAACCTCTTAGGATGGGACAAGGCAAAAATC-------A 406
BSNT_03042___ 404 AACTGGTCTCT-AAAAAAGGCGGCACAAT-----CACATACGAATTTACC 447
|||||.||||| |||||| ||||| |||.||.||||||.||
BL01957___yoe 407 AACTGATCTCTCAAAAAA------ACAATACCCGCACTTATGAATTTTCC 450
BSNT_03042___ 448 GTCCCTACATTAGACGGATCCCCTTCTGC-AAAACGGAAAG-TGACATTC 495
||.||..||||.||.|||||.....|||| |||| ||||| |.||.||.
BL01957___yoe 451 GTACCGGCATTGGATGGATCGGTGACTGCGAAAA--GAAAGATCACGTTT 498
BSNT_03042___ 496 GTGAAAGAAAATAAAAAATGGAAAGTCAATCAATTTGACGCAGTTATATA 545
|||||||||||.||.|||||||||.|||||||..|.||.||.|..||.||
BL01957___yoe 499 GTGAAAGAAAACAACAAATGGAAAATCAATCAGCTCGATGCTGCCATCTA 548
BSNT_03042___ 546 A 546
|
BL01957___yoe 549 A 549
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.