Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04987 and BL01950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:10
# Commandline: needle
# -asequence dna-align/BSNT_04987___yvgQ.1.5803.seq
# -bsequence dna-align/BL01950___cysJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04987___yvgQ-BL01950___cysJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04987___yvgQ-BL01950___cysJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04987___yvgQ
# 2: BL01950___cysJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1729
# Identity: 1399/1729 (80.9%)
# Similarity: 1399/1729 (80.9%)
# Gaps: 23/1729 ( 1.3%)
# Score: 5641.5
#
#
#=======================================
BSNT_04987___ 1 ATGGTGACCAAAATTCTAAAAGCACCGGACGGCTCTCCAAGTGATGTTGA 50
||||.||.|.||||..|||||||.||.||.|||.|.||.||.|||||.||
BL01950___cys 1 ATGGGGAACGAAATATTAAAAGCGCCTGAAGGCCCGCCGAGCGATGTAGA 50
BSNT_04987___ 51 ACGCATTAAAAAAGAAAGTGATTATTTGCGCGGCACGCTGAAAGAAGTGA 100
|||.|||||.||||||||.|||||||||||||||||.|||||.|||..||
BL01950___cys 51 ACGTATTAAGAAAGAAAGCGATTATTTGCGCGGCACCCTGAAGGAATCGA 100
BSNT_04987___ 101 TGCTCGA------TCGAATCAGTGCGGGAATTCCGGATGATGATAACCGC 144
||||||| | ||| ||.||.|||.|.|||||.||.|||||.
BL01950___cys 101 TGCTCGAGCCGCTT----TCA--GCCGGGATTTCAGATGACGACAACCGT 144
BSNT_04987___ 145 CTGATGAAACACCACGGCAGTTATTTGCAGGATGACCGCGACCTCCGAAA 194
||||||||.|||||||||||.||||||||||||||||||||.|||||.||
BL01950___cys 145 CTGATGAAGCACCACGGCAGCTATTTGCAGGATGACCGCGATCTCCGCAA 194
BSNT_04987___ 195 TGAACGCCAAAAGCAGAAGCTTGAGCCCGCATATCAGTTCATGCTGCGCG 244
|||.||.||||||||||||||||||||.||.|||||||||||||||||||
BL01950___cys 195 TGAGCGGCAAAAGCAGAAGCTTGAGCCTGCGTATCAGTTCATGCTGCGCG 244
BSNT_04987___ 245 TGCGTATGCCAGGGGGCGTCTCGACGCCTGAACAATGGCTTGTCATGGAT 294
|.||.|||||.||.||.||..||||||||||.||.|||||||||||||||
BL01950___cys 245 TCCGGATGCCGGGCGGTGTGGCGACGCCTGAGCAGTGGCTTGTCATGGAT 294
BSNT_04987___ 295 GACCTGTCCCAGAAATACGGGAACGGCACATTAAAATTGACGACACGTGA 344
||.||..|||.|||||||||.|||||.|||||.||..||||.||.||.||
BL01950___cys 295 GAGCTTGCCCGGAAATACGGAAACGGAACATTGAAGCTGACAACTCGGGA 344
BSNT_04987___ 345 AACATTCCAAATGCACGGAATTCTGAAATGGAACATGAAGAAAACCATTC 394
||||||||||||||||||.|||.|.||||||||||||||.|||||.||||
BL01950___cys 345 AACATTCCAAATGCACGGCATTTTAAAATGGAACATGAAAAAAACGATTC 394
BSNT_04987___ 395 AGACGATCCACTCAGCACTTTTGGATACGATCGCAGCCTGCGGAGACGTA 444
||.|||||||.|||||..|..|.|||||.||.|||||.|||||.||.||.
BL01950___cys 395 AGTCGATCCATTCAGCCATGCTAGATACCATTGCAGCATGCGGCGATGTT 444
BSNT_04987___ 445 AACCGTAACGTCATGTGTGCATCAAACCCTTATCAATCTGAAATCCACTC 494
|||||.|||||||||||..|.||.||.||.|||||.||.|||||||| ||
BL01950___cys 445 AACCGGAACGTCATGTGCACTTCCAATCCGTATCAGTCAGAAATCCA-TC 493
BSNT_04987___ 495 -AGAGGTATACGAGTGGTCTAAAAAATTAAGTGATGATCTGCTGCCGCGG 543
|||.||.||.||.|||||.||||||.|.||||||||.|||||||||||.
BL01950___cys 494 GAGAAGTGTATGAATGGTCGAAAAAACTGAGTGATGACCTGCTGCCGCGC 543
BSNT_04987___ 544 ACGAGAGCATATCATGAAATTTGGCTTGATGAGGAAAGAGTTGCCGGCAC 593
||..|.||.|||||||||||.||||||||||||||||.|||.||||||||
BL01950___cys 544 ACACGTGCGTATCATGAAATCTGGCTTGATGAGGAAAAAGTGGCCGGCAC 593
BSNT_04987___ 594 GCCGGA---GGAAGAAGTCGAGCCAATGTACGGACCGCTCTATCTGCCGC 640
|||.|| |||.||||||||.||.||||||||||||||.||||||||||
BL01950___cys 594 GCCTGATGCGGATGAAGTCGAACCGATGTACGGACCGCTGTATCTGCCGC 643
BSNT_04987___ 641 GGAAGTTTAAAATCGGTATTGCCGTTCCGCCGTCTAATGATATTGACGTC 690
||||.||.||||||||.||.||||||||||||||.||||||||.||.||.
BL01950___cys 644 GGAAATTCAAAATCGGCATCGCCGTTCCGCCGTCAAATGATATCGATGTA 693
BSNT_04987___ 691 TTTTCACAAGATCTGGGATTCATTGCGATTGTCGAGGATGGCAAGCTGAT 740
|||||.||.|||||.||.||.||.||||||||.|||||||.||||||.||
BL01950___cys 694 TTTTCTCAGGATCTTGGTTTTATCGCGATTGTGGAGGATGACAAGCTCAT 743
BSNT_04987___ 741 CGGTTTTAACGTGGCAATCGGCGGCGGTATGGGAATGACGCATGGCGATA 790
|||.||.|||||.||.|||||||||||.|||||.|||||.||.||.||.|
BL01950___cys 744 CGGCTTCAACGTCGCGATCGGCGGCGGCATGGGCATGACCCACGGGGACA 793
BSNT_04987___ 791 CTGCGACATATCCGCAATTAGCCAAGGTGATCGGTTTCTGCCGGCCTGAG 840
..||.||.||||||||..|.|||||.||.||.||.||||||..||||||.
BL01950___cys 794 AAGCAACGTATCCGCAGCTTGCCAAAGTTATTGGCTTCTGCAAGCCTGAA 843
BSNT_04987___ 841 CAAATGTATGACGTTGCTGAAAAAACGATTACGATTCAGCGTGATTACGG 890
||..|.||.||.||.||||||||||||||||||||.|||||.||.|||||
BL01950___cys 844 CAGCTATACGATGTCGCTGAAAAAACGATTACGATCCAGCGGGACTACGG 893
BSNT_04987___ 891 CAACCGTTCTGTCCGTAAAAATGCGCGGTTCAAATACACAGTTGACCGCC 940
.||||||||.|||||.||||||||.||.|||||.||.||.||||||||||
BL01950___cys 894 AAACCGTTCGGTCCGCAAAAATGCCCGCTTCAAGTATACGGTTGACCGCC 943
BSNT_04987___ 941 TCGGTTTAGAAAACGTAAAAGAAGAATTGGAAAACCGTCTCGGCTGGAGC 990
||||.||.||||..||.|||.|.||..|||||||||||||||||||||||
BL01950___cys 944 TCGGCTTGGAAACGGTCAAAAACGAGCTGGAAAACCGTCTCGGCTGGAGC 993
BSNT_04987___ 991 CTGGAAGAAGCGAAGCCGTATCATTTCGATCATAACGGCGACCGCTATGG 1040
||.|..|||||.|||||.|||||||||||.|||||||||||||||||.||
BL01950___cys 994 CTCGCTGAAGCAAAGCCTTATCATTTCGAGCATAACGGCGACCGCTACGG 1043
BSNT_04987___ 1041 CTGGGTGGAAGGCAT-CGAGGATAAATGGCATTTCACGCTGTTTGTCGAA 1089
||||||..|.|||.| ..|||| |.||||||.||.||..|||||||.||.
BL01950___cys 1044 CTGGGTAAAGGGCGTAAAAGGA-AGATGGCACTTTACAATGTTTGTTGAG 1092
BSNT_04987___ 1090 GGCGGCCGTATAACGGATTACGATGATTATAAGCTGATGACTGGCTTGCG 1139
|||||||||.|.||.|||||.||||||||.|||||||||||.|||||..|
BL01950___cys 1093 GGCGGCCGTGTCACTGATTATGATGATTACAAGCTGATGACCGGCTTAAG 1142
BSNT_04987___ 1140 GGAAATCGCCAAAGTTCATACAGGTGAGTTCCGGCTGACAGCCAATCAGA 1189
|||||||||||||||||||||.||.||..||||.||.||||||||.||.|
BL01950___cys 1143 GGAAATCGCCAAAGTTCATACCGGCGATATCCGCCTCACAGCCAACCAAA 1192
BSNT_04987___ 1190 ACTTAATGATTGCGAACGTTTCAAGCGATAAAAAAGAAGAA-ATCAGTGC 1238
||||.||.|||||.||.||..|||||.| |||||||||.|| |||||.|.
BL01950___cys 1193 ACTTGATCATTGCCAATGTCACAAGCCA-AAAAAAGAAAAAGATCAGCGA 1241
BSNT_04987___ 1239 TTTAATTGAACAATACGGACTAACTGACGGCAAGCACTATTCAGCGCTTC 1288
..|.||.|||||.|..||..|.||||||||||||||.|||.|||||||.|
BL01950___cys 1242 GCTGATCGAACAGTTTGGCTTGACTGACGGCAAGCATTATACAGCGCTCC 1291
BSNT_04987___ 1289 GCCGCAGCTCGATGGCGTGCGTCGCTCTTCCGACCTGCGGATTGGCAATG 1338
|||||||||||||.||.||||||||.||.|||||.|||||.|||||.|||
BL01950___cys 1292 GCCGCAGCTCGATCGCATGCGTCGCACTGCCGACGTGCGGGTTGGCGATG 1341
BSNT_04987___ 1339 GCTGAAGCAGAACGTTATTTGCCGACCCTGTTAGATAAGATTGAAGAGAT 1388
||.|||||.|||||.||||||||||..|||.|.||.||.|||||.||.||
BL01950___cys 1342 GCCGAAGCGGAACGGTATTTGCCGAAGCTGATTGACAAAATTGATGAAAT 1391
BSNT_04987___ 1389 TATTGACGAAAACGGCCTTCGTG-ATCAGGAAATCACCATTCGCATGACA 1437
|.||||.|||||||| |||...| ||.|.|||||.|||||.|||||||||
BL01950___cys 1392 TGTTGAAGAAAACGG-CTTGAAGAATGAAGAAATTACCATCCGCATGACA 1440
BSNT_04987___ 1438 GGATGCCCGAACGGCTGTGCACGTCATGCACTCGGTGAGATCGGATTTAT 1487
||.||||||||||||||.||.||.|||||.|||||.||.|||||.||.||
BL01950___cys 1441 GGGTGCCCGAACGGCTGCGCCCGCCATGCGCTCGGCGAAATCGGCTTCAT 1490
BSNT_04987___ 1488 CGGAAAGGCGCCGGGCAAATATAATATGTATCTTGGCGCTGCGTTTGACG 1537
||||||.||.||||||||.||.|||||||||||.|||||.||.|||||||
BL01950___cys 1491 CGGAAAAGCCCCGGGCAAGTACAATATGTATCTCGGCGCCGCTTTTGACG 1540
BSNT_04987___ 1538 GAAGCCGTTTAAGCAAAATGTACCGTGAAAACATCGGTGAAGCAGACATT 1587
|.||||||.|.||||||||||||||.|||||||||||.||||.|||.|||
BL01950___cys 1541 GCAGCCGTCTGAGCAAAATGTACCGGGAAAACATCGGCGAAGAAGAAATT 1590
BSNT_04987___ 1588 TTAAGCGAGCTGCGCATCCTTCTTTCCCGCTATGCGAAAGAACGTGAGGA 1637
||||..||.||.||||...|||||.|.|||||||||||||||||..|.||
BL01950___cys 1591 TTAAAAGAACTTCGCAATATTCTTCCGCGCTATGCGAAAGAACGCAATGA 1640
BSNT_04987___ 1638 AGGCGAGCATTTCGGTGACTTTGTCATCCGCGCGGGCATTATCAAAGCAA 1687
|||.||.|.||||||.||.||.|||||||||||.||.|||.|.||||.||
BL01950___cys 1641 AGGAGAACGTTTCGGAGATTTCGTCATCCGCGCCGGAATTGTTAAAGAAA 1690
BSNT_04987___ 1688 CAACTGACGGTACGAATTTTCATGATTGA 1716
|.||.|||||.||||||||||||||.|||
BL01950___cys 1691 CGACGGACGGAACGAATTTTCATGACTGA 1719
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