Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05955 and BL01918
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:02
# Commandline: needle
# -asequence dna-align/BSNT_05955___pepT.1.5803.seq
# -bsequence dna-align/BL01918___pepT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05955___pepT-BL01918___pepT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05955___pepT-BL01918___pepT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05955___pepT
# 2: BL01918___pepT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1285
# Identity: 921/1285 (71.7%)
# Similarity: 921/1285 (71.7%)
# Gaps: 104/1285 ( 8.1%)
# Score: 3218.5
#
#
#=======================================
BSNT_05955___ 1 ATGAAAGAAGAAA-TCATTGAACGGTTTACTACATATGTAAAAGTCGACA 49
||| |||||.||| |.||||||||..|.|.|.|.||||..|||||.||.|
BL01918___pep 1 ATG-AAGAACAAATTGATTGAACGCCTCATTTCTTATGCGAAAGTGGATA 49
BSNT_05955___ 50 CACAGTCCGATGAA-----TCAGTTGACACTTGTCCTTCCACACCCGGCC 94
|.|||||..||||| ||||..||| .||||||||.|||||.|
BL01918___pep 50 CGCAGTCAAATGAAAACAGTCAGACGAC-----GCCTTCCACTCCCGGGC 94
BSNT_05955___ 95 AATTGACATTAGGAAACATGCTCGTTGATGAATTGAAGTCAATCGGCATG 144
|..||.|..|.|..||.|||||.||.||.||..||||....|||||||||
BL01918___pep 95 AGCTGGCGCTTGCCAATATGCTTGTCGAAGAGCTGAAAGAGATCGGCATG 144
BSNT_05955___ 145 CAGGATG-CAGCCATTGATGAAAACGGCTATGTCATGGCAACTCTTCCCT 193
.||||.| || |.||.|||||||||||||||||.|||||.||.|||||.|
BL01918___pep 145 AAGGACGTCA-CAATCGATGAAAACGGCTATGTGATGGCGACGCTTCCTT 193
BSNT_05955___ 194 CCAATACTGAAAAAGACGTGCCGACAATCGGTTTTCTCGCTCACGTCGAC 243
|.|||||.||||||||.||||||||.||||||||..|.|||||.||.||.
BL01918___pep 194 CGAATACAGAAAAAGAGGTGCCGACGATCGGTTTCTTGGCTCATGTGGAT 243
BSNT_05955___ 244 ACCGCTACAGACTTTACCGGCAAAAACGTGAATCCGCAAATCATCGAAAG 293
||.||.|||||.||||||||.||.|||||.||||||||..|.||||||..
BL01918___pep 244 ACAGCAACAGATTTTACCGGAAAGAACGTCAATCCGCAGGTTATCGAACA 293
BSNT_05955___ 294 CTATGATGGAAAAGACATCGTTCTTAACGAAAAGCTGCAGGTCACCC--T 341
.||.||.|||||.||.||.||.||.||.||| ||.|.| |
BL01918___pep 294 ATACGACGGAAAGGATATTGTGCTGAATGAA----------TCCCTCAAT 333
BSNT_05955___ 342 GTCACCTGATC--------AATTCCCTGAGCTGTCTGGCTATAAGGGCCA 383
|||..||.||| |||||||.|||||..|.|..|||..|||.||
BL01918___pep 334 GTCGTCTTATCGCCCAAGGAATTCCCCGAGCTAGCAGATTATGCGGGACA 383
BSNT_05955___ 384 TACACTCATCACCACAGACGGCACCACCCTTCTCGGCGCAGACAATAAGG 433
|||..|.||.||.||.|||||.||.||..|.||||||||.||||||||.|
BL01918___pep 384 TACGTTGATTACAACCGACGGAACGACTTTGCTCGGCGCCGACAATAAAG 433
BSNT_05955___ 434 CCGGTATCGCTGAAATCATGACAGCCATGGATTACCTCATCAAACACCCT 483
|.||.|||.|||||||||||||.||.|||||.||..|.||....|||||.
BL01918___pep 434 CTGGGATCTCTGAAATCATGACGGCAATGGAATATTTAATTGCGCACCCC 483
BSNT_05955___ 484 GAAATCAAGCACGGTACAATCAGAGTCGCCTTTACGCCTGATGAAGAAAT 533
||||||||.|||||.|..|||||||||||.|||||.|||||||||||.||
BL01918___pep 484 GAAATCAAACACGGGAAGATCAGAGTCGCTTTTACACCTGATGAAGAGAT 533
BSNT_05955___ 534 CGGAAGAGGGCCGCACAAATTTGATGTGAAACG----GTTCAATGC---- 575
|||.||||||||||||||.|||||.|| || |||||||||
BL01918___pep 534 CGGCAGAGGGCCGCACAAGTTTGACGT----CGAGGCGTTCAATGCCAAA 579
BSNT_05955___ 576 TTCCTTTGCCTACACGGTTGACGGCGGGCCTCTCGGCGAGCTTGAATACG 625
||| ||.||.||||||||||||||.||.||.|||||.||..|.||||
BL01918___pep 580 TTC----GCGTATACGGTTGACGGCGGACCGCTTGGCGAACTGCAGTACG 625
BSNT_05955___ 626 AAAGCTTCAATGCCGCTGCCGCAAAAATTACGATTAAAGGCAAC-AACGT 674
||||||||||||||||.|||||.|||||.||...|||||| ||| |||||
BL01918___pep 626 AAAGCTTCAATGCCGCAGCCGCGAAAATCACTTGTAAAGG-AACGAACGT 674
BSNT_05955___ 675 ACATCCCGGAACAGCTAAAGGGAAAATGATCAACTCTGCGAAAATCGCGA 724
.||.|||||.|||||.|||||.||||||.||||..|.||.||||||||||
BL01918___pep 675 CCACCCCGGCACAGCAAAAGGAAAAATGGTCAATGCCGCCAAAATCGCGA 724
BSNT_05955___ 725 TGAAGCTGAACAGCCTGC--TGCCGGCAGACGAAGCGCCTGAATATACGG 772
||.||.|..|| ||| || ||||||.|.|||||||.|||||||.|||.|
BL01918___pep 725 TGCAGTTCCAC-GCC-GCATTGCCGGAAAACGAAGCTCCTGAATTTACAG 772
BSNT_05955___ 773 AAGGCTATGAAGGCTTCTACCACTTGCTGTCGATTCAA-GGAGACGTAGA 821
||||.|||||||||||.||.||..||||.|| |.|||| ||.||.||...
BL01918___pep 773 AAGGTTATGAAGGCTTTTATCATCTGCTTTC-AATCAAGGGCGATGTTTC 821
BSNT_05955___ 822 GGAAACAAAGCTCTACTACATTATTAGAGACTTTGACAAAGAGA---ATT 868
.|||||.|..||||..||.||.||||||||.|||||| ||||| |||
BL01918___pep 822 TGAAACGAGCCTCTCTTATATCATTAGAGATTTTGAC--AGAGACCGATT 869
BSNT_05955___ 869 TCCAAAAC---AGAAAAGAAA-----CAATGAAGCGTGCCGTTGAAGAAC 910
| ||| ||||||||.| |||..||.|| ..||.|||
BL01918___pep 870 T----AACGAGAGAAAAGACACCGTCCAAAAAATCG------CAAACAAC 909
BSNT_05955___ 911 TTCAAAACG-AATACGGGCAAGACCGGATTCTGC----TGGATATGAACG 955
.|.|||.|| |||||||..||.||.| |..| ||||.|||||.|
BL01918___pep 910 CTTAAAGCGAAATACGGCGAAAACAG----CGTCACAGTGGACATGAATG 955
BSNT_05955___ 956 ACCAATACTACAACATGAGAGAGAAAATTGAACCTGTCATCGAAATCGTC 1005
|.|||||.|||||||||||.||.||.||.|||||.||||..||.||.|||
BL01918___pep 956 ATCAATATTACAACATGAGGGAAAAGATCGAACCGGTCAAAGAGATTGTC 1005
BSNT_05955___ 1006 AACATTGCCAAGCAAGCAATGGAAAACCTCGGCATTGAACCG-------A 1048
.||||||||.|..||||.|||.|||||||.|..||||||||| |
BL01918___pep 1006 GACATTGCCTATAAAGCGATGAAAAACCTTGATATTGAACCGGTCGTTAA 1055
BSNT_05955___ 1049 AGATTTCCCCCATCCGCGGCGGCACCGACGGATCGCAACTGTCCTACATG 1098
| ||.|||||||||||.||.|||||.||.||.||.||.||.|||
BL01918___pep 1056 A-------CCGATCCGCGGCGGTACAGACGGCTCTCAGCTCTCATATATG 1098
BSNT_05955___ 1099 GGGCTTCCGACGCCAAACATCTTTACAGGCGGGGAAAACTTCCACGGCAA 1148
||||||||....||.|||||.||.|||||||||||||||||.|||||.||
BL01918___pep 1099 GGGCTTCCTTGTCCGAACATTTTCACAGGCGGGGAAAACTTTCACGGAAA 1148
BSNT_05955___ 1149 ATTTGAATACATCTCAGTTGATAATATGGTCAAAGCCGTAAATGTCATCG 1198
||..||.||.||.||.|..||.||||||||.|||||||..||||||||||
BL01918___pep 1149 ATACGAGTATATTTCCGCCGACAATATGGTAAAAGCCGCGAATGTCATCG 1198
BSNT_05955___ 1199 TTGAGATTGCAAAGCAGTTTGAAGCGCAAGCCTAA 1233
|.||.||||..||||.||||||||....|||.|||
BL01918___pep 1199 TGGAAATTGTGAAGCTGTTTGAAGAAAGAGCTTAA 1233
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