Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04475 and BL01906

See Amino acid alignment / Visit BSNT_04475 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence dna-align/BSNT_04475___mntC.1.5803.seq
#    -bsequence dna-align/BL01906___mntD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04475___mntC-BL01906___mntD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04475___mntC-BL01906___mntD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04475___mntC
# 2: BL01906___mntD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1477
# Identity:     519/1477 (35.1%)
# Similarity:   519/1477 (35.1%)
# Gaps:         785/1477 (53.1%)
# Score: 1004.5
# 
#
#=======================================

BSNT_04475___      1 -------------AT-GTTTGA---AA-----GTTTGTG--------GCT     20
                                  || ||||||   ||     ||||.||        |||
BL01906___mnt      1 ATGGAGTTTATCCATGGTTTGATGGAATATTCGTTTCTGCAAAAATCGCT     50

BSNT_04475___     21 GCAGCTTCAGCATCCGAATACACAGTGGGTGCTGGCCGGTACGC----TT     66
                     |    ||||.|  .|||.||         ||.|||       ||    ||
BL01906___mnt     51 G----TTCACC--TCGATTA---------TGGTGG-------GCATCATT     78

BSNT_04475___     67 TTGCTCGGGACGGCAAGCGGTGTTTTGGGCAGCTTTGTGCTGCT---GAG    113
                     |               ||||.||..|.|||.|||||.|..|.||   |.|
BL01906___mnt     79 T---------------GCGGCGTCATCGGCTGCTTTATCATTCTCAGGGG    113

BSNT_04475___    114 AA---AGCAAAGTTTAATCGGCGATGCGATGGCCCATTCAGCTCTGCCGG    160
                     ||   .||      |.||.||.||||||||..|.||..|.|.|||.||.|
BL01906___mnt    114 AATGGCGC------TGATGGGAGATGCGATTTCACACGCGGTTCTTCCCG    157

BSNT_04475___    161 GAGTGTGCC-TCGCTTTTCTGTTCACCGGGCAAAAATCACTGCCTTTCTT    209
                     |.|| .||| ||.|||.|.||.||..||        |||.|       ||
BL01906___mnt    158 GCGT-CGCCATCTCTTATATGCTCGGCG--------TCAAT-------TT    191

BSNT_04475___    210 TTTGCTGGGTGCGGCGCTCG-------------CCGGACTG--CTCGGAA    244
                     |||     .|.|||||| ||             ||.|||.|  |||||||
BL01906___mnt    192 TTT-----CTTCGGCGC-CGTCTTTACGGGCATCCTGACGGCTCTCGGAA    235

BSNT_04475___    245 CATTTTGTATTCAACTGATTCCTCGGCTTT-----CAAAAACA-------    282
                                           ||||||.|     |.||||||       
BL01906___mnt    236 ----------------------TCGGCTATGTCAGCCAAAACAGCCGGAT    263

BSNT_04475___    283 -AAGGAGGACTCGGCGATCGGGATTGTTCTTTCTGTGTTTTTTGGCGTCG    331
                      ||..|.||.|||||.|||||.||.||..||.|.|..|||||.|.|||||
BL01906___mnt    264 TAAAAACGATTCGGCCATCGGCATCGTATTTACGGCCTTTTTCGCCGTCG    313

BSNT_04475___    332 GGATCATTCTGCTGACATATATTCAGCAACAGGGGGCGGGAAGCCAAAGC    381
                     |.|||||..||.|.||...|.|    |||           ||||..||||
BL01906___mnt    314 GAATCATATTGATCACGCTTGT----CAA-----------AAGCTCAAGC    348

BSNT_04475___    382 GGGCTTGATTCTTTTTTATTCGGCCAGGCTGC------TTCATTGGTCAG    425
                     |..||..|...|.|.||||||||..|.| |||      |||.||..||||
BL01906___mnt    349 GATCTGTACCATATCTTATTCGGAAATG-TGCTGGCCGTTCGTTCATCAG    397

BSNT_04475___    426 GCA---GGATATCA---TCCTTATTGCAG-GAATAT-----CCGCTGCTC    463
                     .||   ||  ||||   ||.|.||.|.|| .|.|||     |||||| ||
BL01906___mnt    398 ACATGTGG--ATCACGCTCGTCATCGGAGTCATTATTCTTACCGCTG-TC    444

BSNT_04475___    464 TGCTGCTCCTATGTATTGTTTTCTTTAAGGAATTTACA--------TTGA    505
                     |                 ||||        |.||||||        .|.|
BL01906___mnt    445 T-----------------TTTT--------ATTTTACAAAGAGCTGCTCA    469

BSNT_04475___    506 TTA---CTTTTGATC------TCGCGTTTGCAAAGGGATTAG--GAATCC    544
                     |.|   ||||.||.|      |.|||..||...|.||.|| |  |||  |
BL01906___mnt    470 TCACCTCTTTCGACCCGACGATGGCGGCTGTCTACGGCTT-GCCGAA--C    516

BSNT_04475___    545 CGG---------TGCGTTTTTTAA--ACGGGCTTTTGGCTTGTCTGATTG    583
                     |||         |.|  |||||||  ||  ||||||..|      .||.|
BL01906___mnt    517 CGGCTGATCCACTAC--TTTTTAATGAC--GCTTTTAAC------AATGG    556

BSNT_04475___    584 TCTGTGCTGTCGTCATTGGGCTTCAGACTGTTGGTGTGATACTAATGGCG    633
                     ||   .|.|||| |||  .|||||||||.||.||..|.||.||..|.|..
BL01906___mnt    557 TC---ACGGTCG-CAT--CGCTTCAGACCGTCGGCATCATCCTCGTCGTC    600

BSNT_04475___    634 GCTATGCTGATTACACCTGCCATAGCTGC-GAGATATTGGACCGAACGAT    682
                     ||.||||||||.||.||||||..|.|.|| .|..|||||      |||  
BL01906___mnt    601 GCGATGCTGATCACGCCTGCCGCAACCGCTTATCTATTG------ACG--    642

BSNT_04475___    683 TAACCGG--------GATGATCGTCATTGCCGGGATTAC-AGGCG--GGG    721
                      .|||||        ||||||| |..|||.|.|..||.| .||||  ..|
BL01906___mnt    643 -GACCGGCTGTGGGTGATGATC-TATTTGTCCGCTTTCCTCGGCGCTTTG    690

BSNT_04475___    722 TCAGCGG--AGTGGCC--GG----------------AACC-CTGCTTAGC    750
                     |||||||  |..||||  ||                |||| ||.||.||.
BL01906___mnt    691 TCAGCGGTCATCGGCCTTGGATTAAGCTATACGTACAACCTCTCCTCAGG    740

BSNT_04475___    751 ACCACGATGAAGGGAA---------TGGCGACAGGGCCATTAATGATCTT    791
                     |.|        ||.||         ||||.||            |||.||
BL01906___mnt    741 AGC--------GGCAATCGTGCTCGTGGCTAC------------GATTTT    770

BSNT_04475___    792 ATCTGCAACGCTGCTCTTTCTTTTTTCAATGATTTGCGCGCCTAA-----    836
                     .|..|.|        |||||.|||    |.|.|||   |.||.||     
BL01906___mnt    771 GTTCGGA--------CTTTCCTTT----ACGTTTT---CACCGAAACAAG    805

BSNT_04475___    837 GCGGGGATTG----GCTGCTAAATCCATAAGGCTGATGAGGCTGCGGCGC    882
                     |||.|..|||    ||||..|||||.|.|||                   
BL01906___mnt    806 GCGTGCTTTGGAGAGCTGTGAAATCAAGAAG-------------------    836

BSNT_04475___    883 AGAACAAGCAGGG-AGCAAGTGCTTTTGGAGATTTATGAACAATATGAAA    931
                     |.|||     ||| |||    |||            |.|||||||.    
BL01906___mnt    837 AAAAC-----GGGCAGC----GCT------------TCAACAATAA----    861

BSNT_04475___    932 AGAATAATCTTTGTGTAACTGTTGAAAGTGTAAGAAAGAAAAGACGCCTA    981
                                                                       
BL01906___mnt    861 --------------------------------------------------    861

BSNT_04475___    982 TCCTCTTCATTATGCCTTAAGGCATTAAATGACTTGGAACAAGAGAGGTG   1031
                                                                       
BL01906___mnt    861 --------------------------------------------------    861

BSNT_04475___   1032 CATTGAGCGTATCGAAAATGGGATTTGGCAAATCACAAGCAAAGGGATAG   1081
                                                                       
BL01906___mnt    861 --------------------------------------------------    861

BSNT_04475___   1082 AAAAAGGCTATCACACAGCTTTGAAGCAGCGGATGTATGAAGTGTATCTC   1131
                                                                       
BL01906___mnt    861 --------------------------------------------------    861

BSNT_04475___   1132 ATGCATGAAATGGACCTTGCCAATATAGAATCCGATCAGGACTGCTTTGA   1181
                                                                       
BL01906___mnt    861 --------------------------------------------------    861

BSNT_04475___   1182 CCCGGACCGTTTACCGAGAGAAACGAGAGAGCGGCTTTATTCACTCTTAA   1231
                                                                       
BL01906___mnt    861 --------------------------------------------------    861

BSNT_04475___   1232 AGCTGTATGGACGGATGCCTGAGCATCGAAAAGCGTCTCATGATGCCAAG   1281
                                                                       
BL01906___mnt    861 --------------------------------------------------    861

BSNT_04475___   1282 AAGGGACAGATCGCAAATGAGTTTTGA   1308
                                                
BL01906___mnt    861 ---------------------------    861


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