Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04477 and BL01905
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:40
# Commandline: needle
# -asequence dna-align/BSNT_04477___mntA.1.5803.seq
# -bsequence dna-align/BL01905___mntA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04477___mntA-BL01905___mntA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04477___mntA-BL01905___mntA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04477___mntA
# 2: BL01905___mntA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1138
# Identity: 540/1138 (47.5%)
# Similarity: 540/1138 (47.5%)
# Gaps: 425/1138 (37.3%)
# Score: 950.0
#
#
#=======================================
BSNT_04477___ 1 ATGAGACGAGGGCTGATGGCAGCAGTACTTT-----TTGCGAC--CTTTG 43
|||| .||||.|||| .||.|| |||||.| |.|||
BL01905___mnt 1 ATGA----------AATGGAAGCA-AACATTAGCAATTGCGGCGGCATTG 39
BSNT_04477___ 44 CTTTAACGGGATGCGGAACGGATT----CAGCCGG---------AAAAAG 80
.|| |.|||| |.||||| .|||||
BL01905___mnt 40 ATT---------------CTGATTCTCGCCGCCGGCTGCTCCTCGAAAAG 74
BSNT_04477___ 81 CGCTGATCAGCAATTACAAGTGACAG--------CGACAACATCTCAA-- 120
| |.||||.|..|.||..||.|| ||.||.||.|| |
BL01905___mnt 75 C----AGCAGCGAAGAAAACGGAAAGCTGAAGGTCGTCACCACCT--ACT 118
BSNT_04477___ 121 --ATTGCCGATG-CAGCAGAAAACA--TCGGAGGTAAGCATGTAAAAGTC 165
|||....||| ||.|...||||| |||||||..| ||
BL01905___mnt 119 CCATTCTTTATGACATCGTCAAACAAGTCGGAGGGGA-----------TC 157
BSNT_04477___ 166 ACCTC--TTTA------ATGGGACCGGGGGTT-------GATCCGCACCT 200
||.|| |||| ||.|.|||.| | ||.|||||...
BL01905___mnt 158 ACATCGATTTATACAGCATTGTACCTG----TCGGAACAGACCCGCATGA 203
BSNT_04477___ 201 TTACAA--AGCTTCCCAAGGTGACACG---AAAAAATTAATGTCTGCCGA 245
.|||.| .||||||.|| |.||| ||||||..|..|.| |||||
BL01905___mnt 204 ATACGATCCGCTTCCTAA----AGACGTGCAAAAAACGACGGAC-GCCGA 248
BSNT_04477___ 246 TGTTGTTCTGTACAGCGGGTTGCATTTGGA---AGGGAAAATGGAGGATG 292
|||.||..|.||||.|||.|||.||||||| |||||| .||.||
BL01905___mnt 249 TGTCGTCTTTTACAACGGATTGAATTTGGAGACAGGGAA-----CGGCTG 293
BSNT_04477___ 293 -----------TGCTCCAAAAAATCGGC-GAACAACAACAATCGG----- 325
||||..||| |.|| |||.||.| |||
BL01905___mnt 294 GTTTAACAAGCTGCTGGAAA----CAGCTGAAAAAGA-----CGGTGATG 334
BSNT_04477___ 326 -CGGC-------AGTAGCTGAG------------GCCATTCCGAAAAATA 355
||.| |..||||||| |||| |
BL01905___mnt 335 ACGCCCCTGTCTACAAGCTGAGCAAAGGGGTCAAGCCA-----------A 373
BSNT_04477___ 356 AGCTTATTCCTGC---GGG----GGAAGGCAAGACGTTTGATCCCCACGT 398
|||.|.|..|.|| ||| |.||.|.|||| .||||||||.|.
BL01905___mnt 374 AGCATCTCACCGCTAAGGGAAAAGAAACGGAAGA----AGATCCCCATGC 419
BSNT_04477___ 399 CTGGTTCAGCATT----CCGTTATGGAT---CTATGCGGTGGATGAAATT 441
.|||.||..|||| .|| |||| .|||||...|.|.|.||..
BL01905___mnt 420 ATGGCTCGACATTGAAAACG----GGATTCAATATGCAAAGAACGCAAGA 465
BSNT_04477___ 442 GAAGCGCAATTCAGCAAAGCAATGCCTCAGCACGCAGATGCCTTTCG-GA 490
||.||||...||| |||.|.|| ||..|.||...|||.|.| |.|| ||
BL01905___mnt 466 GACGCGCTGATCA--AAAACGAT-CCCGACCATAAAGAAGAC-TACGAGA 511
BSNT_04477___ 491 AAAATGCCAAAGAGTACAAAG--AAGATTTGCAATA--TTTA-GAT-AAG 534
||||.||..|||..||.|..| ||| .|||||.| ||.| ||| |||
BL01905___mnt 512 AAAACGCGGAAGCCTATATCGGCAAG--CTGCAAAAGCTTCATGATGAAG 559
BSNT_04477___ 535 TGGT----CGC-GTAAAGAGATCGCACATATTCCGGAGAAAA----GCCG 575
.||| ||| .||||| ||||.||| ||| ||||
BL01905___mnt 560 CGGTGAACCGCTTTAAAG---------ATATACCG----AAAGAGCGCCG 596
BSNT_04477___ 576 TGTGCTTGTGAC---------TGCT----CATGATGCGTTT--GCGTACT 610
.||.|||||||| .||| .||..|.||.|| ||.|||
BL01905___mnt 597 CGTCCTTGTGACAAGCGAAGGGGCTTTTAAATATTTCGCTTCGGCCTAC- 645
BSNT_04477___ 611 TTGGGAAT-------GAGTATGGATTTAAGGTAAAAGGCCTGCAGGGACT 653
||..| .||||| |||| ||.||| |
BL01905___mnt 646 ---GGCGTCGACGCGCAGTAT--ATTT--GGGAAA--------------T 674
BSNT_04477___ 654 CAGCACAGATTCGGACTATGGATTAAGGGATGTTCAGGAGCT---GGTTG 700
||.|||.|| ||..|| ||||.|| |||
BL01905___mnt 675 CAACACCGA---------------AAATGA-----AGGAACTCCCGGT-- 702
BSNT_04477___ 701 ATCTTCTGACAGA--AAAACAAATAAAAGCTGTGTTCGTAGAAAGCAGTG 748
|||| ||||.|| ||||.||.| |||||
BL01905___mnt 703 ---------CAGATGAAAAAAA-------------TCGTCGACA-CAGTG 729
BSNT_04477___ 749 TATCTGAAAAA-------------TCAATCAATGCAGTGGTGGAAGGCGC 785
.| |||||| |.|.|| ||||.|..|.|||.
BL01905___mnt 730 AA---GAAAAAGGACGTCCCGGCCTTATTC------GTGGAGACAAGCGT 770
BSNT_04477___ 786 TAA-------AGAA---AAAGGCCATACAGTCACAATCGGCG-------- 817
|.| ||.| ||| |||.|.|||.|..||..||||
BL01905___mnt 771 TGACCCGCGGAGCATGGAAA-GCCTTTCAGCCGAAACGGGCGTGCCGATT 819
BSNT_04477___ 818 ---------GTCAGCTTT-----ATTCGGAT------GCCATGGGTGAAA 847
||| || |||| ||| ||| .||||||.
BL01905___mnt 820 AAAGCAAAAGTC----TTCACCGATTC-GATCGGAAAGCC--CGGTGAAG 862
BSNT_04477___ 848 AGGG-----CACAAAAGAAGGCACAT-ACGAAGGAA-----TGTTCCG-- 884
.||| |..|..|.||| || |.|||.||| || .|||
BL01905___mnt 863 CGGGAGATTCCTATTATAAG----ATGATGAAAGAAAACCTTG-ACCGGA 907
BSNT_04477___ 885 -CCACAATATCAACACGATTACTAAAGCGCTTAAATAA 921
|| |||||..| || ||| ..|||||
BL01905___mnt 908 TCC-----ATCAAGGC-----CT----CGC-CGAATAA 930
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