Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04477 and BL01905

See Amino acid alignment / Visit BSNT_04477 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence dna-align/BSNT_04477___mntA.1.5803.seq
#    -bsequence dna-align/BL01905___mntA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04477___mntA-BL01905___mntA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04477___mntA-BL01905___mntA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04477___mntA
# 2: BL01905___mntA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1138
# Identity:     540/1138 (47.5%)
# Similarity:   540/1138 (47.5%)
# Gaps:         425/1138 (37.3%)
# Score: 950.0
# 
#
#=======================================

BSNT_04477___      1 ATGAGACGAGGGCTGATGGCAGCAGTACTTT-----TTGCGAC--CTTTG     43
                     ||||          .||||.|||| .||.||     |||||.|  |.|||
BL01905___mnt      1 ATGA----------AATGGAAGCA-AACATTAGCAATTGCGGCGGCATTG     39

BSNT_04477___     44 CTTTAACGGGATGCGGAACGGATT----CAGCCGG---------AAAAAG     80
                     .||               |.||||    |.|||||         .|||||
BL01905___mnt     40 ATT---------------CTGATTCTCGCCGCCGGCTGCTCCTCGAAAAG     74

BSNT_04477___     81 CGCTGATCAGCAATTACAAGTGACAG--------CGACAACATCTCAA--    120
                     |    |.||||.|..|.||..||.||        ||.||.||.||  |  
BL01905___mnt     75 C----AGCAGCGAAGAAAACGGAAAGCTGAAGGTCGTCACCACCT--ACT    118

BSNT_04477___    121 --ATTGCCGATG-CAGCAGAAAACA--TCGGAGGTAAGCATGTAAAAGTC    165
                       |||....||| ||.|...|||||  |||||||..|           ||
BL01905___mnt    119 CCATTCTTTATGACATCGTCAAACAAGTCGGAGGGGA-----------TC    157

BSNT_04477___    166 ACCTC--TTTA------ATGGGACCGGGGGTT-------GATCCGCACCT    200
                     ||.||  ||||      ||.|.|||.|    |       ||.|||||...
BL01905___mnt    158 ACATCGATTTATACAGCATTGTACCTG----TCGGAACAGACCCGCATGA    203

BSNT_04477___    201 TTACAA--AGCTTCCCAAGGTGACACG---AAAAAATTAATGTCTGCCGA    245
                     .|||.|  .||||||.||    |.|||   ||||||..|..|.| |||||
BL01905___mnt    204 ATACGATCCGCTTCCTAA----AGACGTGCAAAAAACGACGGAC-GCCGA    248

BSNT_04477___    246 TGTTGTTCTGTACAGCGGGTTGCATTTGGA---AGGGAAAATGGAGGATG    292
                     |||.||..|.||||.|||.|||.|||||||   ||||||     .||.||
BL01905___mnt    249 TGTCGTCTTTTACAACGGATTGAATTTGGAGACAGGGAA-----CGGCTG    293

BSNT_04477___    293 -----------TGCTCCAAAAAATCGGC-GAACAACAACAATCGG-----    325
                                ||||..|||    |.|| |||.||.|     |||     
BL01905___mnt    294 GTTTAACAAGCTGCTGGAAA----CAGCTGAAAAAGA-----CGGTGATG    334

BSNT_04477___    326 -CGGC-------AGTAGCTGAG------------GCCATTCCGAAAAATA    355
                      ||.|       |..|||||||            ||||           |
BL01905___mnt    335 ACGCCCCTGTCTACAAGCTGAGCAAAGGGGTCAAGCCA-----------A    373

BSNT_04477___    356 AGCTTATTCCTGC---GGG----GGAAGGCAAGACGTTTGATCCCCACGT    398
                     |||.|.|..|.||   |||    |.||.|.||||    .||||||||.|.
BL01905___mnt    374 AGCATCTCACCGCTAAGGGAAAAGAAACGGAAGA----AGATCCCCATGC    419

BSNT_04477___    399 CTGGTTCAGCATT----CCGTTATGGAT---CTATGCGGTGGATGAAATT    441
                     .|||.||..||||    .||    ||||   .|||||...|.|.|.||..
BL01905___mnt    420 ATGGCTCGACATTGAAAACG----GGATTCAATATGCAAAGAACGCAAGA    465

BSNT_04477___    442 GAAGCGCAATTCAGCAAAGCAATGCCTCAGCACGCAGATGCCTTTCG-GA    490
                     ||.||||...|||  |||.|.|| ||..|.||...|||.|.| |.|| ||
BL01905___mnt    466 GACGCGCTGATCA--AAAACGAT-CCCGACCATAAAGAAGAC-TACGAGA    511

BSNT_04477___    491 AAAATGCCAAAGAGTACAAAG--AAGATTTGCAATA--TTTA-GAT-AAG    534
                     ||||.||..|||..||.|..|  |||  .|||||.|  ||.| ||| |||
BL01905___mnt    512 AAAACGCGGAAGCCTATATCGGCAAG--CTGCAAAAGCTTCATGATGAAG    559

BSNT_04477___    535 TGGT----CGC-GTAAAGAGATCGCACATATTCCGGAGAAAA----GCCG    575
                     .|||    ||| .|||||         ||||.|||    |||    ||||
BL01905___mnt    560 CGGTGAACCGCTTTAAAG---------ATATACCG----AAAGAGCGCCG    596

BSNT_04477___    576 TGTGCTTGTGAC---------TGCT----CATGATGCGTTT--GCGTACT    610
                     .||.||||||||         .|||    .||..|.||.||  ||.||| 
BL01905___mnt    597 CGTCCTTGTGACAAGCGAAGGGGCTTTTAAATATTTCGCTTCGGCCTAC-    645

BSNT_04477___    611 TTGGGAAT-------GAGTATGGATTTAAGGTAAAAGGCCTGCAGGGACT    653
                        ||..|       .|||||  ||||  ||.|||              |
BL01905___mnt    646 ---GGCGTCGACGCGCAGTAT--ATTT--GGGAAA--------------T    674

BSNT_04477___    654 CAGCACAGATTCGGACTATGGATTAAGGGATGTTCAGGAGCT---GGTTG    700
                     ||.|||.||               ||..||     ||||.||   |||  
BL01905___mnt    675 CAACACCGA---------------AAATGA-----AGGAACTCCCGGT--    702

BSNT_04477___    701 ATCTTCTGACAGA--AAAACAAATAAAAGCTGTGTTCGTAGAAAGCAGTG    748
                              ||||  ||||.||             ||||.||.| |||||
BL01905___mnt    703 ---------CAGATGAAAAAAA-------------TCGTCGACA-CAGTG    729

BSNT_04477___    749 TATCTGAAAAA-------------TCAATCAATGCAGTGGTGGAAGGCGC    785
                     .|   ||||||             |.|.||      ||||.|..|.|||.
BL01905___mnt    730 AA---GAAAAAGGACGTCCCGGCCTTATTC------GTGGAGACAAGCGT    770

BSNT_04477___    786 TAA-------AGAA---AAAGGCCATACAGTCACAATCGGCG--------    817
                     |.|       ||.|   ||| |||.|.|||.|..||..||||        
BL01905___mnt    771 TGACCCGCGGAGCATGGAAA-GCCTTTCAGCCGAAACGGGCGTGCCGATT    819

BSNT_04477___    818 ---------GTCAGCTTT-----ATTCGGAT------GCCATGGGTGAAA    847
                              |||    ||     |||| |||      |||  .||||||.
BL01905___mnt    820 AAAGCAAAAGTC----TTCACCGATTC-GATCGGAAAGCC--CGGTGAAG    862

BSNT_04477___    848 AGGG-----CACAAAAGAAGGCACAT-ACGAAGGAA-----TGTTCCG--    884
                     .|||     |..|..|.|||    || |.|||.|||     || .|||  
BL01905___mnt    863 CGGGAGATTCCTATTATAAG----ATGATGAAAGAAAACCTTG-ACCGGA    907

BSNT_04477___    885 -CCACAATATCAACACGATTACTAAAGCGCTTAAATAA    921
                      ||     |||||..|     ||    ||| ..|||||
BL01905___mnt    908 TCC-----ATCAAGGC-----CT----CGC-CGAATAA    930


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.