Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05004 and BL01897

See Amino acid alignment / Visit BSNT_05004 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:12
# Commandline: needle
#    -asequence dna-align/BSNT_05004___yvgZ.1.5803.seq
#    -bsequence dna-align/BL01897___yvgZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05004___yvgZ-BL01897___yvgZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05004___yvgZ-BL01897___yvgZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05004___yvgZ
# 2: BL01897___yvgZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     233/308 (75.6%)
# Similarity:   233/308 (75.6%)
# Gaps:           7/308 ( 2.3%)
# Score: 842.0
# 
#
#=======================================

BSNT_05004___      1 ATGGAAAAGCATAACGAACATAAAACATTAAACCATAAAAGCTCGAAAGA     50
                     ||||.|.|.|||.|.||||   |..|.|||||.|..||||||||.||||.
BL01897___yvg      1 ATGGCAGATCATCATGAAC---ACGCGTTAAATCCCAAAAGCTCTAAAGG     47

BSNT_05004___     51 AAAAGATCAGATTACAAACCGGCTT-AAGCGGATTGAGGGCCAGGTCAGA     99
                     ||||||.||.||.||||||| |||| |||||||||||.||.|||||||||
BL01897___yvg     48 AAAAGAACAAATCACAAACC-GCTTAAAGCGGATTGAAGGACAGGTCAGA     96

BSNT_05004___    100 GGCATTCAAAACATGGTGGAAAACGACAGATATTGTGTAGATATTCTTGT    149
                     |||||||||||.|||.|.|||||.|||.|.||.||.||.||||||||.||
BL01897___yvg     97 GGCATTCAAAAGATGATTGAAAATGACCGCTACTGCGTCGATATTCTCGT    146

BSNT_05004___    150 GCAAATTTCAGCTGTTCAGGCGGCAATGAAAAATGTGGCGCTTCA-TTTG    198
                     .|||||.||||||||.||.||.||.|||.||||.||.|| .|||| ..||
BL01897___yvg    147 TCAAATCTCAGCTGTGCAAGCCGCGATGCAAAAGGTTGC-TTTCAGCCTG    195

BSNT_05004___    199 CTTGAGGATCATGCCCATCATTGTGTAGCAGATGCCATCAAAAGCGGCGA    248
                     ||||||||||||.||||.|||||.||.|||.|.||.||.||||||||.||
BL01897___yvg    196 CTTGAGGATCATACCCACCATTGCGTCGCAAACGCGATTAAAAGCGGTGA    245

BSNT_05004___    249 CGGGGAACAGGCCATTTCTGAGCTTTTGGACGTATTTAAAAAGTTCACAA    298
                     .||.|||.|.|||||....||.||..|.||.||.||||||..|||..|||
BL01897___yvg    246 GGGAGAAGAAGCCATCGAGGAACTGCTTGATGTGTTTAAACGGTTTTCAA    295

BSNT_05004___    299 AATCATAA    306
                     ||||||.|
BL01897___yvg    296 AATCATGA    303


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