Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04590 and BL01895

See Amino acid alignment / Visit BSNT_04590 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence dna-align/BSNT_04590___yulB.1.5803.seq
#    -bsequence dna-align/BL01895___yulB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04590___yulB-BL01895___yulB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04590___yulB-BL01895___yulB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04590___yulB
# 2: BL01895___yulB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 826
# Identity:     538/826 (65.1%)
# Similarity:   538/826 (65.1%)
# Gaps:         113/826 (13.7%)
# Score: 1753.0
# 
#
#=======================================

BSNT_04590___      1 ATGCTAGTAGCAGAACGGCAGCAAAAAATAGTGGAAATAGTAAATATGCG     50
                     |||||.|||||.|||.|.||.||||||||.||.||..|.||.|||.||||
BL01895___yul      1 ATGCTTGTAGCTGAAAGACACCAAAAAATCGTCGAGCTTGTCAATCTGCG     50

BSNT_04590___     51 TTCAAGCATCCGCGTTTCCGAATTAAGTGACATATTTTCAGTCACAGAGG    100
                     .||.|||.|.|||||..|.|||.|.||.||..|.|||||.|||||.||.|
BL01895___yul     51 CTCGAGCGTACGCGTCACAGAACTGAGCGAGCTTTTTTCCGTCACGGAAG    100

BSNT_04590___    101 AAACCATTCGGCGTGATCTTGAAAAGCTTGAAAAAGAACATAAACTGAGC    150
                     ||||.||..||||.|||.|.|||||||||||.||.|||.||||.||||..
BL01895___yul    101 AAACGATCAGGCGCGATTTGGAAAAGCTTGAGAAGGAAAATAAGCTGAAA    150

BSNT_04590___    151 CGGAGCCACGGAGGAGCGGTCAGTATTCAG-CAGAAGGAATCAGAAATTC    199
                     .|.|||||.||.||.||.|||||..|.||| |.||| |||..|||..|.|
BL01895___yul    151 AGAAGCCATGGCGGCGCAGTCAGCGTGCAGACTGAA-GAAAGAGAGGTGC    199

BSNT_04590___    200 ATTTTTCTGAACGGGAAATCACGAATGTCATCGAAAAAAAAGCCATCGCT    249
                     |||||...||.||.|||||.||.||.||.|.|||||||||....||.||.
BL01895___yul    200 ATTTTCGCGAGCGCGAAATTACAAACGTAAACGAAAAAAAGATGATTGCA    249

BSNT_04590___    250 CACGAAGCGGCCAAATATGTAAAAAGCGGAGACCGAATTATTCTCGATGC    299
                     ...|||||.|.|||..||||.||||||||.||.||.||||||||.|||||
BL01895___yul    250 TTTGAAGCCGTCAAGCATGTGAAAAGCGGGGAACGGATTATTCTTGATGC    299

BSNT_04590___    300 AAGCACAACTGCCTGGTACATGGC----------GAAAATACTCCCTGAC    339
                     ||||||.||.||.|||||||||||          |||||.| ||||    
BL01895___yul    300 AAGCACGACGGCATGGTACATGGCAAAAGCGCTTGAAAACA-TCCC----    344

BSNT_04590___    340 ATTGAGCTCACCGTGATTACAAACTCAATGAAAGCAGCTATTGAACTCAG    389
                          |||.|||||.|||||.||.|||.|.|.||..||.|||||||||||
BL01895___yul    345 -----GCTGACCGTCATTACGAATTCAGTCAGAGTCGCGATTGAACTCAG    389

BSNT_04590___    390 CAATAAAGAAAACATATCAGTCATTTCAACAGGCGGCATTTTGCTGGAAA    439
                     |||.||||||||..|..|.|||||||||||.|||||.||..|||||....
BL01895___yul    390 CAAAAAAGAAAAGGTGACGGTCATTTCAACCGGCGGGATGCTGCTGCCGC    439

BSNT_04590___    440 AATCATTATCGTTTGCCGGCCCGTTAGCAGAGCGTTCACTTGAGACCTAT    489
                     ||||..|.||.|.||.||||||.||.||.|||||.||.|||||.|..|||
BL01895___yul    440 AATCGATGTCATATGTCGGCCCTTTGGCTGAGCGCTCCCTTGACATGTAT    489

BSNT_04590___    490 CATGTCAATAAAACCTTTCTGTCATGTAAGGGATTTGACGTACAC-----    534
                     ||.|||||.|||||.||||||||.||.||.||      |||..||     
BL01895___yul    490 CACGTCAACAAAACATTTCTGTCTTGCAAAGG------CGTCGACCCTGC    533

BSNT_04590___    535 -AACGGGATGAGTGATTCAAATGAGTGGCAGGCGCTGCTCAAAAAACGGA    583
                      |.|||..||||.||||||||.||...||||||||||.|.||||||||.|
BL01895___yul    534 GAGCGGCTTGAGCGATTCAAACGAAATGCAGGCGCTGTTGAAAAAACGAA    583

BSNT_04590___    584 TGATCGAAAGGTCGGACCAGACCATTTTGATGGCCGATTCA--AGCAAAT    631
                     |||||||||...|||||.|.||.|||||||||||.||  ||  |||||||
BL01895___yul    584 TGATCGAAATTGCGGACGAAACGATTTTGATGGCGGA--CAGCAGCAAAT    631

BSNT_04590___    632 GGGGGAACCGCGAGTTTTCACATATTGCCTCGCTGCAAGATGTCAGCCGC    681
                      ..|||||| ||.|.|||          |||||      |..||..||||
BL01895___yul    632 -TCGGAACC-CGTGCTTT----------CTCGC------AAATCGACCGC    663

BSNT_04590___    682 CTT------------------ATTACGGATTCTGGACTTGATCCGGCATC    713
                     |||                  ||.||.|||||.|||.||||         
BL01895___yul    664 CTTCATGACCGATACAGGGTCATCACAGATTCAGGAATTGA---------    704

BSNT_04590___    714 GGTAAAAGC---TCTTG---------AGGACAAAAAGGTGAAGGTGACAG    751
                        .|||||   |||||         |.||||.||..|.|||..|.||  
BL01895___yul    705 ---CAAAGCAAATCTTGCCCGCTTGAAAGACATAACAGAGAACATCAC--    749

BSNT_04590___    752 CTGTTCCTCTTTCGAAGAGAGGGTGA    777
                       |.||.||           ||.|||
BL01895___yul    750 --GATCGTC-----------GGCTGA    762


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