Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04590 and BL01895
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:44
# Commandline: needle
# -asequence dna-align/BSNT_04590___yulB.1.5803.seq
# -bsequence dna-align/BL01895___yulB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04590___yulB-BL01895___yulB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04590___yulB-BL01895___yulB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04590___yulB
# 2: BL01895___yulB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 826
# Identity: 538/826 (65.1%)
# Similarity: 538/826 (65.1%)
# Gaps: 113/826 (13.7%)
# Score: 1753.0
#
#
#=======================================
BSNT_04590___ 1 ATGCTAGTAGCAGAACGGCAGCAAAAAATAGTGGAAATAGTAAATATGCG 50
|||||.|||||.|||.|.||.||||||||.||.||..|.||.|||.||||
BL01895___yul 1 ATGCTTGTAGCTGAAAGACACCAAAAAATCGTCGAGCTTGTCAATCTGCG 50
BSNT_04590___ 51 TTCAAGCATCCGCGTTTCCGAATTAAGTGACATATTTTCAGTCACAGAGG 100
.||.|||.|.|||||..|.|||.|.||.||..|.|||||.|||||.||.|
BL01895___yul 51 CTCGAGCGTACGCGTCACAGAACTGAGCGAGCTTTTTTCCGTCACGGAAG 100
BSNT_04590___ 101 AAACCATTCGGCGTGATCTTGAAAAGCTTGAAAAAGAACATAAACTGAGC 150
||||.||..||||.|||.|.|||||||||||.||.|||.||||.||||..
BL01895___yul 101 AAACGATCAGGCGCGATTTGGAAAAGCTTGAGAAGGAAAATAAGCTGAAA 150
BSNT_04590___ 151 CGGAGCCACGGAGGAGCGGTCAGTATTCAG-CAGAAGGAATCAGAAATTC 199
.|.|||||.||.||.||.|||||..|.||| |.||| |||..|||..|.|
BL01895___yul 151 AGAAGCCATGGCGGCGCAGTCAGCGTGCAGACTGAA-GAAAGAGAGGTGC 199
BSNT_04590___ 200 ATTTTTCTGAACGGGAAATCACGAATGTCATCGAAAAAAAAGCCATCGCT 249
|||||...||.||.|||||.||.||.||.|.|||||||||....||.||.
BL01895___yul 200 ATTTTCGCGAGCGCGAAATTACAAACGTAAACGAAAAAAAGATGATTGCA 249
BSNT_04590___ 250 CACGAAGCGGCCAAATATGTAAAAAGCGGAGACCGAATTATTCTCGATGC 299
...|||||.|.|||..||||.||||||||.||.||.||||||||.|||||
BL01895___yul 250 TTTGAAGCCGTCAAGCATGTGAAAAGCGGGGAACGGATTATTCTTGATGC 299
BSNT_04590___ 300 AAGCACAACTGCCTGGTACATGGC----------GAAAATACTCCCTGAC 339
||||||.||.||.||||||||||| |||||.| ||||
BL01895___yul 300 AAGCACGACGGCATGGTACATGGCAAAAGCGCTTGAAAACA-TCCC---- 344
BSNT_04590___ 340 ATTGAGCTCACCGTGATTACAAACTCAATGAAAGCAGCTATTGAACTCAG 389
|||.|||||.|||||.||.|||.|.|.||..||.|||||||||||
BL01895___yul 345 -----GCTGACCGTCATTACGAATTCAGTCAGAGTCGCGATTGAACTCAG 389
BSNT_04590___ 390 CAATAAAGAAAACATATCAGTCATTTCAACAGGCGGCATTTTGCTGGAAA 439
|||.||||||||..|..|.|||||||||||.|||||.||..|||||....
BL01895___yul 390 CAAAAAAGAAAAGGTGACGGTCATTTCAACCGGCGGGATGCTGCTGCCGC 439
BSNT_04590___ 440 AATCATTATCGTTTGCCGGCCCGTTAGCAGAGCGTTCACTTGAGACCTAT 489
||||..|.||.|.||.||||||.||.||.|||||.||.|||||.|..|||
BL01895___yul 440 AATCGATGTCATATGTCGGCCCTTTGGCTGAGCGCTCCCTTGACATGTAT 489
BSNT_04590___ 490 CATGTCAATAAAACCTTTCTGTCATGTAAGGGATTTGACGTACAC----- 534
||.|||||.|||||.||||||||.||.||.|| |||..||
BL01895___yul 490 CACGTCAACAAAACATTTCTGTCTTGCAAAGG------CGTCGACCCTGC 533
BSNT_04590___ 535 -AACGGGATGAGTGATTCAAATGAGTGGCAGGCGCTGCTCAAAAAACGGA 583
|.|||..||||.||||||||.||...||||||||||.|.||||||||.|
BL01895___yul 534 GAGCGGCTTGAGCGATTCAAACGAAATGCAGGCGCTGTTGAAAAAACGAA 583
BSNT_04590___ 584 TGATCGAAAGGTCGGACCAGACCATTTTGATGGCCGATTCA--AGCAAAT 631
|||||||||...|||||.|.||.|||||||||||.|| || |||||||
BL01895___yul 584 TGATCGAAATTGCGGACGAAACGATTTTGATGGCGGA--CAGCAGCAAAT 631
BSNT_04590___ 632 GGGGGAACCGCGAGTTTTCACATATTGCCTCGCTGCAAGATGTCAGCCGC 681
..|||||| ||.|.||| ||||| |..||..||||
BL01895___yul 632 -TCGGAACC-CGTGCTTT----------CTCGC------AAATCGACCGC 663
BSNT_04590___ 682 CTT------------------ATTACGGATTCTGGACTTGATCCGGCATC 713
||| ||.||.|||||.|||.||||
BL01895___yul 664 CTTCATGACCGATACAGGGTCATCACAGATTCAGGAATTGA--------- 704
BSNT_04590___ 714 GGTAAAAGC---TCTTG---------AGGACAAAAAGGTGAAGGTGACAG 751
.||||| ||||| |.||||.||..|.|||..|.||
BL01895___yul 705 ---CAAAGCAAATCTTGCCCGCTTGAAAGACATAACAGAGAACATCAC-- 749
BSNT_04590___ 752 CTGTTCCTCTTTCGAAGAGAGGGTGA 777
|.||.|| ||.|||
BL01895___yul 750 --GATCGTC-----------GGCTGA 762
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