Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00897 and BL01869
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence dna-align/BSNT_00897___ydeI.1.5803.seq
# -bsequence dna-align/BL01869.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00897___ydeI-BL01869.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00897___ydeI-BL01869.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00897___ydeI
# 2: BL01869
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 608
# Identity: 482/608 (79.3%)
# Similarity: 482/608 (79.3%)
# Gaps: 28/608 ( 4.6%)
# Score: 1928.0
#
#
#=======================================
BSNT_00897___ 1 ATGACAAATAGCAGAACGAATCCGAAGGTTGATGAATTTTTAAGTAAAGC 50
|||||||||||||||||||||||.||||||||||||||||||||.|||||
BL01869 1 ATGACAAATAGCAGAACGAATCCAAAGGTTGATGAATTTTTAAGCAAAGC 50
BSNT_00897___ 51 GAAAAAGTGGAAGGAAGAATTTGAGAAGTTGAGAACC-----ATCATTCT 95
..||||||||||||||||||||.|||||.| || |||.|.||
BL01869 51 CGAAAAGTGGAAGGAAGAATTTAAGAAGCT-----CCGTCAAATCGTACT 95
BSNT_00897___ 96 TGACTGTGAGCTGACTGAAGATTTTAAGTGGATGCATCCTTGTTACACAT 145
|||.||||||||||..||||||||.|||||||.||||||||||||.||.|
BL01869 96 TGAATGTGAGCTGAACGAAGATTTCAAGTGGAAGCATCCTTGTTATACGT 145
BSNT_00897___ 146 ACAATAATAAAAATGTCGTTTTAATACATGGGTTTAAAGAATATTGTGCG 195
.|.|.||||||||..||||||||||.|||||.|||||.||||||||||||
BL01869 146 TCGAGAATAAAAACATCGTTTTAATCCATGGATTTAAGGAATATTGTGCG 195
BSNT_00897___ 196 CTTCTGTTTCACAAAGGTGCCCTATTACAGGATACCGATGGAATTCTCAT 245
|||.|||||||.|||||.||..|.|||.||||..||.|.||.|||||.||
BL01869 196 CTTTTGTTTCATAAAGGCGCATTGTTAAAGGACCCCAACGGGATTCTTAT 245
BSNT_00897___ 246 TCAACAAACGGAGAATGTACAGGCGGCGCGCCAGATTCGGTTTACAACTG 295
.||.|||||||||||||||||.||.|||||.|||.||||.||.||.|.||
BL01869 246 CCAGCAAACGGAGAATGTACAAGCCGCGCGGCAGGTTCGATTCACCAATG 295
BSNT_00897___ 296 TTCAGGAAATAAATGAGCTAGAAAACATTTTGAAAGCCTATATTCACGAA 345
|.||.||||||..|||..|.||.|.||||||||||||.|||||..|.||.
BL01869 296 TACAAGAAATAGCTGAAATGGAGACCATTTTGAAAGCTTATATAAATGAG 345
BSNT_00897___ 346 GCCATTGAAGTTGAAAAAGCCGGTTTGAAAGTGGAAGTT-AACA------ 388
||||||||.||.|||||||||||..||.|||||||..|| ||||
BL01869 346 GCCATTGATGTAGAAAAAGCCGGCCTGCAAGTGGATTTTAAACAGGCTGC 395
BSNT_00897___ 389 AAAATATTGAATTGAAC-ATTCCTGAAGAACTTCAAAATAAATTCGATGA 437
|.||||| || |||||.||||||||||||||.|||||||.|||
BL01869 396 AGAATAT--------ACAATTCCAGAAGAACTTCAAAAAAAATTCGCTGA 437
BSNT_00897___ 438 AATCCCTGCATTGAAAATTGCTTTTGAAGCTTTGACCCCGGGACGGCAAA 487
||||||.||.||.|||...|||||||||||.|||||.|||||.|||||||
BL01869 438 AATCCCAGCTTTAAAAGCGGCTTTTGAAGCATTGACGCCGGGCCGGCAAA 487
BSNT_00897___ 488 GAGCGTACACTCTTTATTTTTCTCAAGCC-AAACAATCCAAAACCCGAGA 536
||||.||.|.|||||||||||| |||.|| |||||||||||||||.||||
BL01869 488 GAGCATATATTCTTTATTTTTC-CAAACCAAAACAATCCAAAACCAGAGA 536
BSNT_00897___ 537 ATCGAGAGTCGAAAAATATGTGCAAAAAATTCTCGATGGAAAGGGATTAA 586
.|||.|..|.|||||||||...||..||||||||||||||||||||||.|
BL01869 537 GTCGCGGATTGAAAAATATACTCAGCAAATTCTCGATGGAAAGGGATTGA 586
BSNT_00897___ 587 AGGATTAG 594
|.||.|||
BL01869 587 ATGACTAG 594
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