Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05757 and BL01858
See
Amino acid alignment /
Visit
BSNT_05757 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:51
# Commandline: needle
# -asequence dna-align/BSNT_05757.1.5803.seq
# -bsequence dna-align/BL01858___ywfM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05757-BL01858___ywfM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05757-BL01858___ywfM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05757
# 2: BL01858___ywfM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1154
# Identity: 573/1154 (49.7%)
# Similarity: 573/1154 (49.7%)
# Gaps: 388/1154 (33.6%)
# Score: 1401.0
#
#
#=======================================
BSNT_05757 1 ATGACGGCATGCATTTTTTATCTCAAGCGGCATTTTATCTCCACAATCTT 50
BL01858___ywf 0 -------------------------------------------------- 0
BSNT_05757 51 ATTTTCAGATAAATCCTTCTTACATAAAGATAACCACGACAAAAAGAAAA 100
BL01858___ywf 0 -------------------------------------------------- 0
BSNT_05757 101 ACGATAAAATGACAACAGCATCCATATATAAAGGGGAGAGGCAGATGAAG 150
|||||.
BL01858___ywf 1 --------------------------------------------ATGAAA 6
BSNT_05757 151 G----GGAATTTTCACAGCTTGTTTGTGCTGATCGCGGCTTTTTTCTGGG 196
| || ||| |||||||..||.|.|||||..||||.||||
BL01858___ywf 7 GTATCGG----TTC------TGTTTGTCTTGCTTGCGGCAATTTTATGGG 46
BSNT_05757 197 GGACCACGGGAACCGTTCAGGCATTGGCTCCAGAAAG-CGCCACACCGCT 245
|.||.||||||||....||||||||.||.|| ||||| .||..||||.||
BL01858___ywf 47 GAACGACGGGAACAACCCAGGCATTTGCGCC-GAAAGAGGCGGCACCTCT 95
BSNT_05757 246 GGCATTTGGGGCGTTCAGGTTATTAA------TAGGAGGAAGCGCCATGC 289
.|..||.||.||..|||| || |.||.||.|.|.||.|||
BL01858___ywf 96 TGTGTTCGGCGCTGTCAG------AATGGCTGTCGGCGGCATCACCCTGC 139
BSNT_05757 290 T----------GCTT---GCGGT---TTGGATC--AGC--CGGGAGCTTC 319
| |||| ||||| |||.|.| ||| |.|| |
BL01858___ywf 140 TCTTGTTCGCGGCTTTCCGCGGTCAATTGAAACGAAGCGGCTGG-----C 184
BSNT_05757 320 ACGTGAAAA-ATTGGTCATGGCCGCTCGTATTTTTAGCCGCTGTTTGTAT 368
.|||.|||| ..||.||||.||.|| .||.||| ||
BL01858___ywf 185 CCGTTAAAACGCTGATCATCGCAGC------ATTGAGC----------AT 218
BSNT_05757 369 GGCGTGTTACCAGCC--GCTGTTTTTCA-----CAG-CGGTTAAAGAAAC 410
|||.|.||||||||| .||.||||||| ||| |.|| |
BL01858___ywf 219 GGCATTTTACCAGCCTTTCTTTTTTTCAGCCGTCAGCCTGT--------C 260
BSNT_05757 411 GGGAATTGCAGTGGGAACTGTGATTGCCATCGGCAGTGCGCCTATCATTG 460
.|||||.||.||.|||||.||..|.|||||||||||.||.||.||.||||
BL01858___ywf 261 AGGAATCGCCGTCGGAACGGTCGTCGCCATCGGCAGCGCTCCGATTATTG 310
BSNT_05757 461 CCGGGACCCTCGAATGGGCCGTATTGAAGAAA-----CGCCCGCGAAACT 505
||||...||||||||||...||.||.|| ||| |||...|||||
BL01858___ywf 311 CCGGCTGCCTCGAATGGCTGGTGTTCAA-AAAGGTTCCGCAGACGAAA-- 357
BSNT_05757 506 CTTGGTGGATTGCGACTGTGCTG--GCTTTA--ACGGGTTGCTGGCTTCT 551
||||||||.||.|| ||||| ||..|| |.|.||.|| |||.|
BL01858___ywf 358 --TGGTGGATCGCAAC--TGCTGCAGCGATAGCAGGCGTAGC---CTTAT 400
BSNT_05757 552 GTTTTCCGACAGTTCCAATGTTCGGATTGATGTGGCTGGTG--TTCT--- 596
..|| ||.|.|| ||.|..|.||..||..||.| ||||
BL01858___ywf 401 TATT-----CATTCCC-----TCCGCCTCATCGGGGGGGAGCTTTCTCGG 440
BSNT_05757 597 --TA----TGGCGCTTGGAGCGGGTGCTTCTTTTGCAGGCTATACGCTCA 640
|| |.||.|||||.||.|||..|||.|||||.|.|||.|||||.|
BL01858___ywf 441 CATACTGCTCGCACTTGGCGCCGGTCTTTCCTTTGCCGTCTACACGCTGA 490
BSNT_05757 641 TCAGTAAAGCGATGATGAAAACCCAGCCTCCTCG----AGCGACCTCC-- 684
..||.|| |||| ||||| | |||.|...||
BL01858___ywf 491 CAAGCAA---------GAAA-------CTCCT-GCAAAAGCAAAAGCCGG 523
BSNT_05757 685 --GCCGT---------TGTATTCATGATCAGCGCCATCTTACTGACGCCG 723
||.|| .||||||.|..|.|||||..|.||.||..|.|||
BL01858___ywf 524 AGGCTGTCACAGGCACCGTATTCTTTTTAAGCGCTGTATTGCTTGCCCCG 573
BSNT_05757 724 CTATTATGGCAGTCAGATATCTCG--TGGATAT----GGACCCCTAGAGG 767
.|.||.|..|.||..| |||||| |||||.| ||..| || ||
BL01858___ywf 574 TTGTTGTTTCTGTACG--ATCTCGGCTGGATCTCATCGGTTC---AG-GG 617
BSNT_05757 768 ACTGGGAACAAGCCTTTACATCGGGTTAATTGCAACATGTGCCGCATACT 817
|.|||.....|||||.||.||||||.|.||||||||..|.|||||.|||.
BL01858___ywf 618 AATGGCTGTCAGCCTCTATATCGGGGTCATTGCAACCGGAGCCGCGTACC 667
BSNT_05757 818 TTTTGTTTGCGAAAGGGCTTACCGGG-----GTTCCGGCCTCGGCGGCGG 862
|.||.|||.|||.|||..| || ||.||.|||||..||||||
BL01858___ywf 668 TGTTATTTACGACAGGATT-----GGCAAAAGTGCCCGCCTCAACGGCGG 712
BSNT_05757 863 TCACGCTTTCTTTAGCGGAACCGCTGACGGCTTCATTGCTTGG----CGT 908
|.|||||.||..|.||.||||||||.||.||.||..|| |||| |||
BL01858___ywf 713 TGACGCTGTCGCTTGCTGAACCGCTTACAGCGTCGCTG-TTGGGAACCGT 761
BSNT_05757 909 GTTTTTCATAGGGGAAATGCTTTCGCC-----TTTCTCGTGGCTGGGC-- 951
|.||.||| |||||..||| ||| |||| ||||||
BL01858___ywf 762 GCTTGTCA---GGGAATCGCT---GCCTCTTGTTTC------CTGGGCCG 799
BSNT_05757 952 --ATTGCGCTTATGATGCTGGGGCTTTTGGTCATTT----------CTGC 989
||.||.| |||| .|||||.|.||||| || .
BL01858___ywf 800 GGATCGCCC------TGCT---TCTTTTAGGCATTTTTTATATTTCCT-A 839
BSNT_05757 990 TGCGCCTC-----GGAAACAAAAAACGGCCGAGGCAGCTCACATG---TC 1031
|..||| | |||.|.||.|||| ||.|..||.||| .|
BL01858___ywf 840 TCAGCC-CAAAAAGGATAAAATAAAC-------GCTGAACAGATGAAAGC 881
BSNT_05757 1032 TTAA 1035
.|||
BL01858___ywf 882 GTAA 885
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.